Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 3.6e-70 268.1 132 100.0
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 1.1e-55 219.9 131 84.0
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.3e-48 196.4 136 76.5
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 3.3e-39 165.2 139 63.3
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 2.4e-37 159.1 128 64.8
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 1.3e-35 153.3 134 64.2
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 5.0e-35 151.4 130 64.6
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.3e-32 143.3 130 58.5
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 1.1e-31 140.2 128 60.2
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 1.4e-26 123.2 106 62.3
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 4.2e-26 121.7 91 65.9
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 4.2e-26 121.7 91 65.9
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 2.3e-24 115.9 128 52.3
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 3.9e-24 115.2 132 50.8
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 5.1e-24 114.8 129 47.3
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 1.3e-22 110.2 105 53.3
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.2e-22 109.4 133 48.1
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.2e-22 109.4 133 48.1
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 2.2e-22 109.4 130 44.6
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.8e-22 109.0 111 51.4
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 8.2e-22 107.5 109 49.5
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.8e-21 106.3 109 50.5
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.4e-21 105.9 124 50.0
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 4.1e-21 105.1 127 48.0
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.3e-21 104.8 109 49.5
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 6.9e-21 104.4 105 52.4
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 4.5e-20 101.7 110 49.1
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 5.9e-20 101.3 131 47.3
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.7e-19 99.8 99 51.5
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 6.5e-19 97.8 98 52.0
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 6.5e-19 97.8 118 46.6
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 6.5e-19 97.8 109 45.9
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 8.5e-19 97.4 103 49.5
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 3.2e-18 95.5 129 41.1
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 3.2e-18 95.5 126 39.7
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 2.7e-17 92.4 129 45.0
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 2.7e-17 92.4 99 48.5
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 4.7e-17 91.7 102 45.1
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 6.1e-17 91.3 131 47.3
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 6.1e-17 91.3 133 42.9
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 6.1e-17 91.3 130 41.5
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 8.0e-17 90.9 129 43.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.4e-16 90.1 90 52.2
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.0e-16 89.0 103 43.7
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 6.7e-16 87.8 120 46.7
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 6.7e-16 87.8 103 41.7
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.0e-15 86.3 99 46.5
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 2.0e-15 86.3 87 46.0
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 2.6e-15 85.9 124 37.9
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.3e-15 85.5 131 42.0
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.3e-15 85.5 131 42.0
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 4.4e-15 85.1 111 49.5
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 5.7e-15 84.7 118 41.5
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 9.7e-15 84.0 103 40.8
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 1.3e-14 83.6 128 39.8
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.3e-14 83.6 101 42.6
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.2e-14 82.8 112 42.0
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 2.2e-14 82.8 100 41.0
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.8e-14 82.4 102 42.2
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.7e-14 82.0 131 38.9
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 6.3e-14 81.3 106 45.3
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 6.3e-14 81.3 106 45.3
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 1.4e-13 80.1 100 43.0
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.4e-13 80.1 131 39.7
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.8e-13 79.7 128 35.9
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 3.1e-13 79.0 124 33.9
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 7.0e-13 77.8 130 39.2
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 9.1e-13 77.4 130 39.2
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 2.0e-12 76.3 125 40.8
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.6e-12 75.9 111 37.8
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 4.5e-12 75.1 96 41.7
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.9e-12 74.7 89 40.4
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.0e-11 73.9 96 40.6
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 1.7e-11 73.2 104 46.2
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 5.0e-11 71.6 106 42.5
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 1.1e-10 70.5 109 34.9
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 4.2e-10 68.6 99 38.4
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 4.2e-10 68.6 99 38.4
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 7.2e-10 67.8 129 38.8
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.7e-09 65.9 65 49.2
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 4.7e-09 65.1 97 38.1
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 4.7e-09 65.1 99 32.3
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 8.0e-09 64.3 73 45.2
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 8.0e-09 64.3 86 43.0
arahy.Tifrunner.gnm1.ann1.4UH4YI Arachis hypogaea HOM05D026189 ORTHO05D009508 1.4e-08 63.5 102 37.3
HanXRQChr11g0325281 Helianthus annuus HOM05D007637 ORTHO05D009508 5.2e-08 61.6 100 31.0
arahy.Tifrunner.gnm1.ann1.K3RR71 Arachis hypogaea HOM05D026189 ORTHO05D009508 6.7e-08 61.2 89 40.4
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 6.7e-08 61.2 86 34.9
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 8.8e-08 60.8 52 55.8
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.5e-07 60.1 114 37.7
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.5e-07 60.1 90 41.1
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.0e-07 59.7 54 50.0
Phvul.007G035600 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 2.0e-07 59.7 99 36.4
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.7e-07 58.2 43 62.8
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 5.7e-07 58.2 128 34.4
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.3e-06 57.0 99 36.4
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.3e-06 57.0 42 59.5


User provided reference genes

Program Settings