Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28197 Trifolium pratense HOM05D008362 ORTHO05D010554 1.1e-83 313.5 187 100.0
Medtr8g012580 Medicago truncatula HOM05D008362 ORTHO05D010554 6.6e-17 91.7 52 90.4
Ca_23217_v3 Cicer arietinum L. HOM05D008362 ORTHO05D010554 3.3e-16 89.4 52 94.2
Lj3g0027645 Lotus japonicus HOM05D008362 ORTHO05D010554 3.3e-16 89.4 60 78.3
Glyma.16G089400 Glycine max HOM05D008362 ORTHO05D010554 1.2e-15 87.4 185 48.1
Lalb_Chr07g0194111 Lupinus albus HOM05D008362 ORTHO05D010554 4.7e-15 85.5 53 88.7
Psat4g204280 Pisum sativum HOM05D008362 ORTHO05D010554 4.0e-14 82.4 52 84.6
arahy.Tifrunner.gnm1.ann1.L802W9 Arachis hypogaea HOM05D008362 ORTHO05D010554 5.2e-14 82.0 50 82.0
Phvul.010G022800 Phaseolus vulgaris HOM05D008362 ORTHO05D010554 5.2e-14 82.0 77 64.9
VMungo0331G0307 Vigna mungo HOM05D008362 ORTHO05D010554 2.6e-13 79.7 50 84.0
CiPaw.13G050500 Carya illinoinensis HOM05D008362 ORTHO05D010554 4.6e-10 68.9 50 82.0
TWI18G0011 Tripterygium wilfordii HOM05D008362 ORTHO05D010554 6.0e-10 68.6 48 70.8
QL09p049939 Quercus lobata HOM05D008362 ORTHO05D010554 1.0e-09 67.8 49 81.6
Gohir.A07G092300 Gossypium hirsutum HOM05D008362 ORTHO05D010554 1.3e-09 67.4 42 78.6
GSVIVG01006384001 Vitis vinifera HOM05D008362 ORTHO05D010554 1.3e-09 67.4 50 76.0
COL.COLO4_16103 Corchorus olitorius HOM05D008362 ORTHO05D010554 1.1e-08 64.3 62 51.6
PGR083G0575 Punica granatum HOM05D008362 ORTHO05D010554 1.9e-08 63.5 51 68.6
MD05G1169400 Malus domestica HOM05D008362 ORTHO05D010554 2.5e-08 63.2 37 83.8
CANSAT01G1703 Cannabis sativa HOM05D008362 ORTHO05D010554 5.6e-08 62.0 52 71.2
FAN27G1021 Fragaria x ananassa HOM05D008362 ORTHO05D010554 7.3e-08 61.6 35 85.7
MSTRG.20975 Avicennia marina HOM05D008362 ORTHO05D010554 9.6e-08 61.2 51 62.7
Thecc.01G217300 Theobroma cacao HOM05D008362 ORTHO05D010554 2.1e-07 60.1 64 54.7
Cfa021480 Carpinus fangiana HOM05D008362 ORTHO05D010554 2.8e-07 59.7 47 76.6
FAN15G1847 Fragaria x ananassa HOM05D008362 ORTHO05D010554 3.6e-07 59.3 34 85.3
Gohir.D07G096800 Gossypium hirsutum HOM05D008362 ORTHO05D010554 3.6e-07 59.3 52 71.2
Haze_03348 Corylus avellana HOM05D008362 ORTHO05D010554 4.7e-07 58.9 34 97.1
Gorai.001G104200 Gossypium raimondii HOM05D008362 ORTHO05D010554 4.7e-07 58.9 52 69.2
Ciclev10024415m.g Citrus clementina HOM05D008362 ORTHO05D010554 8.1e-07 58.2 40 77.5
Sabra02G0188000 Salix brachista HOM05D008362 ORTHO05D010554 8.1e-07 58.2 48 60.4
Hma1.2p1_0226F.1_g095250 Hydrangea macrophylla HOM05D008362 ORTHO05D010554 1.1e-06 57.8 38 78.9
Duzib211G0336 Durio zibethinus HOM05D008362 ORTHO05D010554 1.8e-06 57.0 72 51.4
ATR0561G249 Amborella trichopoda HOM05D008362 ORTHO05D010554 4.0e-06 55.8 42 66.7
Manes.13G051000 Manihot esculenta HOM05D008362 ORTHO05D010554 4.0e-06 55.8 33 81.8
Nn3g20067 Nelumbo nucifera HOM05D008362 ORTHO05D010554 6.8e-06 55.1 61 57.4
Nitab4.5_0003020g0140 Nicotiana tabacum HOM05D008362 ORTHO05D010554 6.8e-06 55.1 48 54.2
Prupe.8G196600 Prunus persica HOM05D008362 ORTHO05D010554 6.8e-06 55.1 32 84.4
CSS0045887 Camellia sinensis var. sinensis HOM05D008362 ORTHO05D010554 8.9e-06 54.7 34 85.3
FAN24G1934 Fragaria x ananassa HOM05D008362 ORTHO05D010554 8.9e-06 54.7 43 58.1


User provided reference genes

Program Settings