Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.1e-144 516.5 253 100.0
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 8.1e-119 430.6 254 84.3
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.2e-106 390.2 250 78.4
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 7.6e-101 370.9 237 78.5
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 7.6e-101 370.9 237 78.5
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 2.2e-100 369.4 250 74.4
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 1.5e-96 356.7 236 76.7
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 1.4e-78 297.0 237 66.7
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 5.5e-75 285.0 252 60.7
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 9.4e-75 284.3 169 85.8
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 1.2e-74 283.9 229 62.9
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 4.7e-74 282.0 248 60.9
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 1.8e-73 280.0 247 58.7
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 5.2e-73 278.5 259 60.2
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 5.2e-73 278.5 249 57.0
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 1.5e-72 276.9 229 60.3
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 2.0e-72 276.6 233 60.9
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 9.7e-72 274.2 253 55.7
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 1.1e-70 270.8 226 60.2
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 1.1e-70 270.8 230 58.7
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.4e-70 270.4 246 58.5
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 2.4e-70 269.6 246 58.5
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 3.1e-70 269.2 223 62.3
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 5.3e-70 268.5 228 60.1
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 5.3e-70 268.5 192 72.9
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 2.0e-69 266.5 249 57.0
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 7.7e-69 264.6 225 58.7
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 3.8e-68 262.3 232 59.5
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 5.0e-68 261.9 220 59.5
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 6.5e-68 261.5 230 58.7
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 8.5e-68 261.2 224 61.2
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 1.1e-67 260.8 233 56.2
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.5e-67 260.4 233 56.2
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 2.5e-67 259.6 230 58.3
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 4.2e-67 258.8 232 57.8
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.2e-67 258.8 225 59.6
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 9.4e-67 257.7 253 55.7
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.6e-66 256.9 221 59.7
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 4.7e-66 255.4 214 61.2
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 8.0e-66 254.6 214 61.2
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 1.0e-65 254.2 231 55.8
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 1.4e-65 253.8 223 60.5
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 6.7e-65 251.5 229 56.8
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 8.8e-65 251.1 238 55.5
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 2.0e-64 250.0 220 58.6
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 2.6e-64 249.6 231 56.3
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 1.7e-63 246.9 224 55.8
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 2.8e-63 246.1 248 56.5
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 6.3e-63 245.0 250 52.8
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 1.1e-62 244.2 252 51.6
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.4e-62 243.8 255 52.9
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 2.4e-62 243.0 248 52.4
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 3.1e-62 242.7 232 54.7
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 5.3e-62 241.9 248 54.0
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 9.1e-62 241.1 222 56.8
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 2.0e-61 240.0 253 54.2
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 4.5e-61 238.8 245 54.7
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.2e-60 236.5 255 52.5
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.2e-60 236.5 229 55.0
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 2.9e-60 236.1 248 52.8
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 5.0e-60 235.3 230 51.7
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 1.1e-59 234.2 246 52.8
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.9e-59 233.4 224 52.2
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.9e-59 233.4 226 51.8
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 3.2e-59 232.6 247 53.4
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 3.2e-59 232.6 226 56.6
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 4.2e-59 232.3 248 52.8
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 1.6e-58 230.3 223 54.3
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 2.1e-58 229.9 192 57.3
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 3.6e-58 229.2 250 53.6
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 6.1e-58 228.4 289 45.0
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 8.0e-58 228.0 252 52.8
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.8e-57 226.9 196 59.2
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.8e-57 226.9 224 56.2
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.8e-57 226.9 229 54.1
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 3.0e-57 226.1 177 65.0
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 6.8e-57 224.9 287 46.0
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 8.8e-57 224.6 193 59.6
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 1.2e-56 224.2 223 56.1
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 9.8e-56 221.1 225 55.6
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.8e-54 216.9 255 50.2
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 7.0e-54 214.9 226 51.8
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 1.6e-53 213.8 248 48.4
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.3e-52 210.7 215 55.3
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 2.3e-52 209.9 163 71.2
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 8.6e-52 208.0 221 49.3
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 3.6e-50 202.6 228 50.0
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 6.8e-49 198.4 177 56.5
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 2.2e-47 193.4 227 47.1
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 3.1e-46 189.5 223 44.4
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 3.5e-45 186.0 179 58.7
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 5.9e-45 185.3 185 53.0
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 2.3e-44 183.3 154 56.5
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 8.6e-44 181.4 216 50.0
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 2.5e-43 179.9 210 48.6
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 4.0e-41 172.6 248 43.1
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.0e-40 170.2 203 47.8
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 1.2e-37 161.0 221 43.0
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.2e-37 161.0 173 51.4
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 2.3e-36 156.8 182 45.6
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 5.0e-36 155.6 149 55.0
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.1e-33 147.9 141 56.0
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 1.5e-32 144.1 216 41.2
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 2.0e-29 133.7 115 54.8
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 2.5e-27 126.7 87 71.3
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 2.1e-21 107.1 142 45.8
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 1.6e-18 97.4 131 38.2
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 1.4e-17 94.4 60 66.7
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.2e-17 92.4 73 60.3
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.6e-16 90.1 64 65.6
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 1.4e-14 84.3 186 30.6
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.5e-13 79.7 72 56.9
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.6e-11 71.6 187 32.6
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.0e-08 63.9 39 66.7
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.4e-08 62.8 40 62.5
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 9.9e-08 61.6 38 65.8
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 9.9e-08 61.6 79 50.6
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 2.9e-07 60.1 155 27.7
Cre03.g180500 Chlamydomonas reinhardtii HOM05D006411 ORTHO05D007563 8.4e-07 58.5 179 24.6


User provided reference genes

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