Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2798 Trifolium pratense HOM05D005193 ORTHO05D006316 7.5e-39 163.3 79 100.0
TPR.G2800 Trifolium pratense HOM05D005193 ORTHO05D006316 3.4e-31 137.9 72 90.3
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 5.2e-24 114.0 72 73.6
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 6.9e-24 113.6 72 73.6
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 2.6e-23 111.7 72 73.6
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 1.6e-17 92.4 71 64.8
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 1.2e-15 86.3 71 62.0
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.2e-15 86.3 74 62.2
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.5e-15 85.9 71 66.2
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 9.9e-15 83.2 74 63.5
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 2.2e-14 82.0 74 63.5
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 5.4e-13 77.4 66 62.1
arahy.Tifrunner.gnm1.ann1.6PV7EE Arachis hypogaea HOM05D005193 ORTHO05D006316 9.3e-13 76.6 59 64.4
arahy.Tifrunner.gnm1.ann1.DP08C5 Arachis hypogaea HOM05D005193 ORTHO05D006316 9.3e-13 76.6 59 64.4
arahy.Tifrunner.gnm1.ann1.SW2PFC Arachis hypogaea HOM05D005193 ORTHO05D006316 9.3e-13 76.6 59 64.4
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 1.6e-12 75.9 36 97.2
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 3.0e-11 71.6 66 54.5
Haze_09712 Corylus avellana HOM05D005193 ORTHO05D006316 6.7e-11 70.5 69 56.5
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 6.7e-11 70.5 70 52.9
vmacro09699 Vaccinium macrocarpon HOM05D005193 ORTHO05D006316 7.4e-10 67.0 58 60.3
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 1.3e-09 66.2 74 50.0
GSVIVG01037691001 Vitis vinifera HOM05D005193 ORTHO05D006316 1.4e-08 62.8 72 50.0
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 1.8e-08 62.4 59 59.3
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 1.8e-08 62.4 61 59.0
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 3.1e-08 61.6 60 53.3
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 3.1e-08 61.6 60 53.3
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 4.0e-08 61.2 67 55.2
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 6.9e-08 60.5 54 55.6
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 6.9e-08 60.5 58 55.2
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.0e-07 58.9 60 51.7
Lj1C877G9 Lonicera japonica HOM05D005193 ORTHO05D006316 2.0e-07 58.9 53 52.8
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.4e-07 58.2 68 51.5
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 3.4e-07 58.2 53 56.6
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 4.5e-07 57.8 60 51.7
Eucgr.F03486 Eucalyptus grandis HOM05D005193 ORTHO05D006316 5.8e-07 57.4 74 48.6
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 5.8e-07 57.4 60 53.3
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 5.8e-07 57.4 69 50.7
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 7.6e-07 57.0 70 47.1
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 9.9e-07 56.6 66 50.0
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 1.3e-06 56.2 77 46.8
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 1.7e-06 55.8 62 50.0
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 2.2e-06 55.5 53 56.6
Cpa.g.sc12.273 Carica papaya HOM05D005193 ORTHO05D006316 2.2e-06 55.5 54 51.9
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 2.9e-06 55.1 60 48.3
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 3.8e-06 54.7 62 50.0
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 3.8e-06 54.7 62 50.0
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 3.8e-06 54.7 62 50.0
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 3.8e-06 54.7 54 51.9
Lalb_Chr17g0348621 Lupinus albus HOM05D005193 ORTHO05D006316 3.8e-06 54.7 72 45.8
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 4.9e-06 54.3 54 50.0


User provided reference genes

Program Settings