Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27827 Trifolium pratense HOM05D000699 ORTHO05D000519 7.9e-71 270.4 142 100.0
arahy.Tifrunner.gnm1.ann1.AR92CS Arachis hypogaea HOM05D000699 ORTHO05D000519 1.9e-32 142.9 205 42.9
Medtr2g030825 Medicago truncatula HOM05D000699 ORTHO05D000519 3.3e-29 132.1 82 78.0
Medtr2g030845 Medicago truncatula HOM05D000699 ORTHO05D000519 3.3e-29 132.1 82 78.0
Psat1g165640 Pisum sativum HOM05D000699 ORTHO05D000519 5.0e-25 118.2 75 77.3
Prupe.8G132700 Prunus persica HOM05D000699 ORTHO05D000519 5.5e-24 114.8 228 37.3
arahy.Tifrunner.gnm1.ann1.9BC1I1 Arachis hypogaea HOM05D000699 ORTHO05D000519 9.4e-24 114.0 260 32.7
Sopen01g049900 Solanum pennellii HOM05D000699 ORTHO05D000519 1.2e-23 113.6 127 45.7
Phvul.006G126400 Phaseolus vulgaris HOM05D000699 ORTHO05D000519 1.6e-23 113.2 82 68.3
PGSC0003DMG400025775 Solanum tuberosum HOM05D000699 ORTHO05D000519 3.6e-23 112.1 119 46.2
Solyc01g107720.3 Solanum lycopersicum HOM05D000699 ORTHO05D000519 6.1e-23 111.3 143 48.3
Atru.chr5.2593 Acer truncatum HOM05D000699 ORTHO05D000519 1.0e-22 110.5 206 37.9
Medtr2g021580 Medicago truncatula HOM05D000699 ORTHO05D000519 1.4e-22 110.2 75 70.7
FvH4_2g05430 Fragaria vesca HOM05D000699 ORTHO05D000519 2.6e-21 105.9 204 35.8
CAN.G1231.15 Capsicum annuum HOM05D000699 ORTHO05D000519 5.7e-21 104.8 119 45.4
Peaxi162Scf00016g02253 Petunia axillaris HOM05D000699 ORTHO05D000519 5.7e-21 104.8 142 41.5
ECA236G1996 Erigeron canadensis HOM05D000699 ORTHO05D000519 7.5e-21 104.4 179 40.2
PGSC0003DMG400025774 Solanum tuberosum HOM05D000699 ORTHO05D000519 1.7e-20 103.2 141 50.4
HanXRQChr16g0509861 Helianthus annuus HOM05D000699 ORTHO05D000519 2.8e-20 102.4 157 43.3
HanXRQChr16g0510031 Helianthus annuus HOM05D000699 ORTHO05D000519 2.8e-20 102.4 156 42.3
FAN24G2436 Fragaria x ananassa HOM05D000699 ORTHO05D000519 3.7e-20 102.1 228 34.2
Medtr2g030835 Medicago truncatula HOM05D000699 ORTHO05D000519 4.8e-20 101.7 75 73.3
Solyc01g107710.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 8.3e-20 100.9 139 45.3
MD05G1087500 Malus domestica HOM05D000699 ORTHO05D000519 1.1e-19 100.5 82 62.2
THA.LOC104825374 Tarenaya hassleriana HOM05D000699 ORTHO05D000519 2.4e-19 99.4 80 61.2
CsaV3_7G008300 Cucumis sativus L. HOM05D000699 ORTHO05D000519 7.0e-19 97.8 73 64.4
Oeu013736.1 Olea europaea HOM05D000699 ORTHO05D000519 1.2e-18 97.1 229 29.7
ClCG02G006230 Citrullus lanatus HOM05D000699 ORTHO05D000519 2.0e-18 96.3 75 62.7
MELO3C018477.2 Cucumis melo HOM05D000699 ORTHO05D000519 2.0e-18 96.3 60 75.0
Ca_00866_v3 Cicer arietinum L. HOM05D000699 ORTHO05D000519 1.3e-17 93.6 74 66.2
Peaxi162Scf00152g00239 Petunia axillaris HOM05D000699 ORTHO05D000519 1.3e-17 93.6 185 35.1
Sed0016996 Sechium edule HOM05D000699 ORTHO05D000519 2.3e-17 92.8 79 57.0
HanXRQChr10g0291481 Helianthus annuus HOM05D000699 ORTHO05D000519 5.0e-17 91.7 72 61.1
Lj9A321T82 Lonicera japonica HOM05D000699 ORTHO05D000519 5.0e-17 91.7 69 63.8
BcaC05g28476 Brassica carinata HOM05D000699 ORTHO05D000519 8.6e-17 90.9 70 67.1
A05p30180 Brassica napus HOM05D000699 ORTHO05D000519 8.6e-17 90.9 70 67.1
C05p45610 Brassica napus HOM05D000699 ORTHO05D000519 8.6e-17 90.9 70 67.1
BolC5t33285H Brassica oleracea HOM05D000699 ORTHO05D000519 8.6e-17 90.9 70 67.1
BraA05t21858Z Brassica rapa HOM05D000699 ORTHO05D000519 8.6e-17 90.9 70 67.1
Lsat_1_v5_gn_7_86641 Lactuca sativa HOM05D000699 ORTHO05D000519 8.6e-17 90.9 211 32.2
Nitab4.5_0000292g0090 Nicotiana tabacum HOM05D000699 ORTHO05D000519 1.5e-16 90.1 200 33.5
AT3G19430 Arabidopsis thaliana HOM05D000699 ORTHO05D000519 1.9e-16 89.7 70 65.7
SGA_v2.0_scaffold225G43085 Striga asiatica HOM05D000699 ORTHO05D000519 1.9e-16 89.7 68 64.7
AUR62013253 Chenopodium quinoa HOM05D000699 ORTHO05D000519 2.5e-16 89.4 82 59.8
AL3G32840 Arabidopsis lyrata HOM05D000699 ORTHO05D000519 3.3e-16 89.0 70 64.3
CARHR094830 Cardamine hirsuta HOM05D000699 ORTHO05D000519 3.3e-16 89.0 50 78.0
EL10Ac9g22303 Beta vulgaris HOM05D000699 ORTHO05D000519 5.5e-16 88.2 70 62.9
HanXRQChr16g0509881 Helianthus annuus HOM05D000699 ORTHO05D000519 5.5e-16 88.2 72 58.3
Lsat_1_v5_gn_3_95940 Lactuca sativa HOM05D000699 ORTHO05D000519 5.5e-16 88.2 222 30.6
Thhalv10022024m.g Eutrema salsugineum HOM05D000699 ORTHO05D000519 9.5e-16 87.4 50 76.0
BcaB04g20704 Brassica carinata HOM05D000699 ORTHO05D000519 1.2e-15 87.0 82 56.1
A01p35230 Brassica napus HOM05D000699 ORTHO05D000519 1.2e-15 87.0 82 56.1
BraA01t03604Z Brassica rapa HOM05D000699 ORTHO05D000519 1.2e-15 87.0 82 56.1
BcaB06g26002 Brassica carinata HOM05D000699 ORTHO05D000519 1.6e-15 86.7 70 65.7
HanXRQChr16g0509871 Helianthus annuus HOM05D000699 ORTHO05D000519 2.1e-15 86.3 68 60.3
BcaC09g48896 Brassica carinata HOM05D000699 ORTHO05D000519 2.8e-15 85.9 68 61.8
BcaC09g48897 Brassica carinata HOM05D000699 ORTHO05D000519 2.8e-15 85.9 68 61.8
C01p44670 Brassica napus HOM05D000699 ORTHO05D000519 2.8e-15 85.9 68 61.8
BolC1t04436H Brassica oleracea HOM05D000699 ORTHO05D000519 2.8e-15 85.9 68 61.8
HanXRQChr16g0510061 Helianthus annuus HOM05D000699 ORTHO05D000519 2.8e-15 85.9 66 63.6
HanXRQChr16g0510081 Helianthus annuus HOM05D000699 ORTHO05D000519 6.1e-15 84.7 66 62.1
HanXRQChr16g0510091 Helianthus annuus HOM05D000699 ORTHO05D000519 6.1e-15 84.7 66 62.1
EL10Ac3g05208 Beta vulgaris HOM05D000699 ORTHO05D000519 1.0e-14 84.0 80 56.2
AUR62006030 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.4e-14 83.6 68 60.3
AUR62035598 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.4e-14 83.6 50 74.0
PGR042G0840 Punica granatum HOM05D000699 ORTHO05D000519 1.8e-14 83.2 75 53.3
CANSAT54G1825 Cannabis sativa HOM05D000699 ORTHO05D000519 6.8e-14 81.3 100 48.0
Sopen01g049890 Solanum pennellii HOM05D000699 ORTHO05D000519 2.0e-13 79.7 184 38.0
AUR62028849 Chenopodium quinoa HOM05D000699 ORTHO05D000519 3.4e-13 79.0 231 30.7
Lsat_1_v5_gn_7_86221 Lactuca sativa HOM05D000699 ORTHO05D000519 4.4e-13 78.6 81 51.9
Lsat_1_v5_gn_7_86661 Lactuca sativa HOM05D000699 ORTHO05D000519 4.4e-13 78.6 81 51.9
PSO302G0231 Papaver somniferum HOM05D000699 ORTHO05D000519 4.4e-13 78.6 208 35.6
DCAR_003946 Daucus carota HOM05D000699 ORTHO05D000519 5.7e-13 78.2 72 56.9
Lsat_1_v5_gn_7_86261 Lactuca sativa HOM05D000699 ORTHO05D000519 7.5e-13 77.8 75 49.3
Cc08_g09630 Coffea canephora HOM05D000699 ORTHO05D000519 9.8e-13 77.4 138 41.3
AUR62023735 Chenopodium quinoa HOM05D000699 ORTHO05D000519 1.3e-12 77.0 63 55.6
QL11p034220 Quercus lobata HOM05D000699 ORTHO05D000519 1.7e-12 76.6 243 26.3
Sopen11g030790 Solanum pennellii HOM05D000699 ORTHO05D000519 1.7e-12 76.6 75 52.0
TAR633G2749 Trochodendron aralioides HOM05D000699 ORTHO05D000519 2.2e-12 76.3 60 63.3
CAN.G1231.16 Capsicum annuum HOM05D000699 ORTHO05D000519 3.7e-12 75.5 82 48.8
ECA236G1582 Erigeron canadensis HOM05D000699 ORTHO05D000519 4.9e-12 75.1 83 51.8
Solyc11g073140.2 Solanum lycopersicum HOM05D000699 ORTHO05D000519 6.3e-12 74.7 75 50.7
Sopen04g030430 Solanum pennellii HOM05D000699 ORTHO05D000519 6.3e-12 74.7 75 50.7
Peaxi162Scf00152g00132 Petunia axillaris HOM05D000699 ORTHO05D000519 1.1e-11 73.9 71 52.1
PSO541G5354 Papaver somniferum HOM05D000699 ORTHO05D000519 2.4e-11 72.8 227 30.0
Aa31LG8G6180 Aethionema arabicum HOM05D000699 ORTHO05D000519 4.1e-11 72.0 68 51.5
Nitab4.5_0000436g0100 Nicotiana tabacum HOM05D000699 ORTHO05D000519 5.4e-11 71.6 83 44.6
Peaxi162Scf00152g00015 Petunia axillaris HOM05D000699 ORTHO05D000519 1.2e-10 70.5 132 34.8
Potri.009G097400 Populus trichocarpa HOM05D000699 ORTHO05D000519 1.6e-10 70.1 66 47.0
PSO724G0461 Papaver somniferum HOM05D000699 ORTHO05D000519 2.7e-10 69.3 94 43.6
CANSAT54G2779 Cannabis sativa HOM05D000699 ORTHO05D000519 3.5e-10 68.9 181 30.4
PSO729G0179 Papaver somniferum HOM05D000699 ORTHO05D000519 5.9e-10 68.2 78 52.6
PGSC0003DMG400021585 Solanum tuberosum HOM05D000699 ORTHO05D000519 2.9e-09 65.9 75 44.0
CsaV3_1G014670 Cucumis sativus L. HOM05D000699 ORTHO05D000519 1.1e-08 63.9 172 26.7
PSO675G3610 Papaver somniferum HOM05D000699 ORTHO05D000519 2.5e-08 62.8 76 47.4
AUR62006031 Chenopodium quinoa HOM05D000699 ORTHO05D000519 3.3e-08 62.4 47 63.8
AUR62035599 Chenopodium quinoa HOM05D000699 ORTHO05D000519 3.3e-08 62.4 47 63.8
AUR62035600 Chenopodium quinoa HOM05D000699 ORTHO05D000519 3.3e-08 62.4 47 63.8
Nitab4.5_0002815g0110 Nicotiana tabacum HOM05D000699 ORTHO05D000519 4.3e-08 62.0 93 43.0
QL10p017845 Quercus lobata HOM05D000699 ORTHO05D000519 7.3e-08 61.2 44 56.8
TWI75G0625 Tripterygium wilfordii HOM05D000699 ORTHO05D000519 7.3e-08 61.2 43 58.1
MELO3C004745.2 Cucumis melo HOM05D000699 ORTHO05D000519 9.5e-08 60.8 156 30.1
PSO782G2038 Papaver somniferum HOM05D000699 ORTHO05D000519 9.5e-08 60.8 81 42.0
Sp3g17490 Schrenkiella parvula HOM05D000699 ORTHO05D000519 9.5e-08 60.8 40 65.0
Nitab4.5_0005392g0070 Nicotiana tabacum HOM05D000699 ORTHO05D000519 1.2e-07 60.5 93 41.9
SGA_v2.0_scaffold103G30006 Striga asiatica HOM05D000699 ORTHO05D000519 1.6e-07 60.1 121 34.7
Nitab4.5_0009329g0010 Nicotiana tabacum HOM05D000699 ORTHO05D000519 2.1e-07 59.7 93 41.9
Prupe.6G124900 Prunus persica HOM05D000699 ORTHO05D000519 2.1e-07 59.7 220 25.0
EL10Ac9g22305 Beta vulgaris HOM05D000699 ORTHO05D000519 2.8e-07 59.3 68 39.7
Ah.01g010790 Amaranthus hybridus HOM05D000182 ORTHO05D000112 3.6e-07 58.9 46 67.4
Ah.01g018050 Amaranthus hybridus HOM05D000699 ORTHO05D000519 3.6e-07 58.9 46 67.4
QL01p013178 Quercus lobata HOM05D000699 ORTHO05D000519 3.6e-07 58.9 43 55.8
AUR62005707 Chenopodium quinoa HOM05D000699 ORTHO05D000519 4.7e-07 58.5 47 57.4
FvH4_5g10780 Fragaria vesca HOM05D000699 ORTHO05D000519 4.7e-07 58.5 192 25.5
TAR369G0225 Trochodendron aralioides HOM05D000699 ORTHO05D000519 4.7e-07 58.5 63 46.0
MBI17_g31311_MAGBIO Magnolia biondii HOM05D000699 ORTHO05D000519 6.1e-07 58.2 75 40.0
Oeu031103.1 Olea europaea HOM05D000699 ORTHO05D000519 8.0e-07 57.8 48 52.1
QL01p013166 Quercus lobata HOM05D000699 ORTHO05D000519 8.0e-07 57.8 43 53.5
Lj6g0018886 Lotus japonicus HOM05D000699 ORTHO05D000519 1.0e-06 57.4 76 42.1
CSS0047489 Camellia sinensis var. sinensis HOM05D000699 ORTHO05D000519 1.8e-06 56.6 39 56.4
ClCG01G012160 Citrullus lanatus HOM05D000699 ORTHO05D000519 2.3e-06 56.2 45 51.1
Migut.A00201 Erythranthe guttata HOM05D000699 ORTHO05D000519 2.3e-06 56.2 160 26.9
MD11G1162000 Malus domestica HOM05D000699 ORTHO05D000519 2.3e-06 56.2 47 46.8
Sabra09G0112700 Salix brachista HOM05D000699 ORTHO05D000519 3.0e-06 55.8 115 36.5
Cfa010056 Carpinus fangiana HOM05D000699 ORTHO05D000519 4.0e-06 55.5 40 52.5
PGR119G1263 Punica granatum HOM05D000699 ORTHO05D000519 4.0e-06 55.5 47 46.8
AUR62002452 Chenopodium quinoa HOM05D000699 ORTHO05D000519 5.2e-06 55.1 42 66.7
Cc08_g09640 Coffea canephora HOM05D000699 ORTHO05D000519 8.9e-06 54.3 201 32.3
PSO339G1535 Papaver somniferum HOM05D000699 ORTHO05D000519 8.9e-06 54.3 47 55.3
PSO384G0034 Papaver somniferum HOM05D000699 ORTHO05D000519 8.9e-06 54.3 47 55.3


User provided reference genes

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