Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 2.3e-61 238.8 129 100.0
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 5.7e-60 234.2 129 97.7
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.8e-58 229.2 129 94.6
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.4e-55 219.5 121 97.5
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.5e-52 209.5 129 85.3
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 5.7e-52 207.6 128 85.2
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 9.7e-52 206.8 128 84.4
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 2.2e-51 205.7 128 84.4
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 2.2e-51 205.7 128 84.4
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.1e-50 203.4 128 83.6
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.1e-50 203.4 129 82.2
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 83.6
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 2.6e-49 198.7 128 79.7
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 78.9
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 78.9
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 7.7e-49 197.2 128 80.5
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 8.5e-48 193.7 128 76.6
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.5e-47 193.0 129 79.1
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.5e-47 193.0 128 78.1
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.5e-47 192.2 129 77.5
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 3.2e-47 191.8 128 78.1
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 3.2e-47 191.8 128 76.6
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 3.2e-47 191.8 128 77.3
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 4.2e-47 191.4 129 75.2
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 5.5e-47 191.0 128 79.7
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 7.2e-47 190.7 126 78.6
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 7.2e-47 190.7 126 78.6
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.6e-46 189.5 128 78.9
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.6e-46 189.5 128 77.3
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.1e-46 189.1 128 75.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.7e-46 188.7 128 77.3
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 77.3
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 75.8
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.0e-45 186.8 104 96.2
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.0e-45 186.8 128 76.6
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 1.4e-45 186.4 129 73.6
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.4e-45 186.4 129 77.5
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 2.3e-45 185.7 126 77.8
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 4.0e-45 184.9 131 77.1
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.2e-45 184.5 129 76.0
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 6.7e-45 184.1 128 74.2
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.8e-45 183.7 128 75.0
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 8.8e-45 183.7 127 74.8
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.2e-44 183.3 129 73.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.2e-44 183.3 129 75.2
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.2e-44 183.3 129 75.2
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 1.2e-44 183.3 128 75.8
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.5e-44 183.0 122 78.7
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 2.0e-44 182.6 128 72.7
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.0e-44 182.6 128 73.4
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 7.5e-44 180.6 129 72.9
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 9.7e-44 180.3 125 74.4
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 9.7e-44 180.3 129 72.9
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.3e-43 179.9 128 74.2
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.7e-43 179.5 129 72.9
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 1.7e-43 179.5 128 72.7
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.7e-43 179.5 129 72.1
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.2e-43 179.1 127 72.4
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 2.8e-43 178.7 128 71.9
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 2.8e-43 178.7 128 71.9
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 3.7e-43 178.3 129 72.9
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 3.7e-43 178.3 129 72.9
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.8e-43 177.9 125 73.6
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 4.8e-43 177.9 128 72.7
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 6.3e-43 177.6 128 73.4
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 8.2e-43 177.2 126 71.4
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 8.2e-43 177.2 128 72.7
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 2.4e-42 175.6 128 70.3
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 2.4e-42 175.6 126 72.2
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 5.3e-42 174.5 119 76.5
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 7.0e-42 174.1 128 69.5
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 7.0e-42 174.1 128 70.3
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 9.1e-42 173.7 129 69.0
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.2e-41 173.3 128 69.5
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.6e-41 172.9 128 69.5
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.7e-41 172.2 128 71.9
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 2.7e-41 172.2 128 74.2
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 3.5e-41 171.8 128 65.6
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.5e-41 171.4 125 73.6
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.7e-40 169.5 135 68.9
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.5e-39 166.4 129 73.6
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 3.2e-39 165.2 121 73.6
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 3.2e-39 165.2 120 73.3
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.6e-38 162.9 130 66.9
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 2.7e-38 162.2 119 72.3
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 4.7e-38 161.4 129 68.2
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 6.1e-38 161.0 113 75.2
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.4e-37 159.8 129 69.0
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 2.3e-37 159.1 172 55.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 3.0e-37 158.7 137 62.8
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 1.7e-35 152.9 129 64.3
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 1.7e-35 152.9 129 65.1
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 1.7e-35 152.9 129 64.3
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 5.4e-34 147.9 104 75.0
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 1.6e-33 146.4 125 66.4
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 2.0e-33 146.0 128 57.8
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.0e-33 146.0 128 59.4
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 4.2e-31 138.3 116 65.5
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 5.5e-31 137.9 186 47.8
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.2e-30 136.7 99 69.7
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 4.7e-30 134.8 101 72.3
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.0e-29 132.1 104 67.3
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 6.8e-29 131.0 92 72.8
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.4e-26 123.2 92 68.5
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 9.2e-26 120.6 120 50.8
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 2.8e-22 109.0 99 50.5
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 3.0e-21 105.5 92 60.9
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 6.8e-21 104.4 106 58.5
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.6e-20 102.4 70 72.9
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 5.7e-20 101.3 92 60.9
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 1.4e-18 96.7 92 58.7
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 9.2e-18 94.0 93 57.0
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 1.7e-16 89.7 63 66.7
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 5.0e-16 88.2 62 72.6
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 5.0e-16 88.2 55 83.6
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.5e-15 86.7 66 66.7
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.9e-15 86.3 62 71.0
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 2.5e-15 85.9 65 69.2
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 3.3e-15 85.5 62 67.7
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 9.5e-15 84.0 64 67.2
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 9.5e-15 84.0 62 66.1
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 1.3e-11 73.6 110 34.5
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 2.9e-11 72.4 115 33.9
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 3.5e-09 65.5 61 52.5
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.0e-08 63.9 77 55.8
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 8.6e-08 60.8 37 78.4


User provided reference genes

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