Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 3.0e-129 465.3 259 100.0
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 1.0e-60 237.7 258 54.3
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 3.0e-60 236.1 249 52.6
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 5.0e-55 218.8 257 48.6
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 5.1e-44 182.2 270 43.0
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 4.7e-37 159.1 259 38.2
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.5e-35 154.1 263 38.0
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 1.6e-29 134.0 260 35.0
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 1.6e-29 134.0 258 34.9
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 1.8e-28 130.6 263 33.1
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 5.2e-28 129.0 263 33.1
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 6.8e-28 128.6 268 32.5
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 5.7e-27 125.6 253 32.8
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 1.1e-25 121.3 259 34.7
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 1.4e-25 120.9 263 32.3
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 9.1e-25 118.2 257 30.7
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 4.5e-24 115.9 258 31.0
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 2.9e-23 113.2 269 31.2
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 5.0e-23 112.5 272 32.0
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 2.5e-22 110.2 258 30.6
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 4.2e-22 109.4 273 30.8
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 1.2e-21 107.8 275 28.7
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 1.6e-21 107.5 257 28.4
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 8.0e-21 105.1 274 30.3
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 3.0e-20 103.2 265 33.6
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 4.0e-20 102.8 251 29.1
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.0e-19 100.5 265 33.2
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.7e-19 99.0 265 31.7
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 5.7e-19 99.0 256 29.3
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 7.5e-19 98.6 278 28.4
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 9.8e-19 98.2 265 31.7
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 9.8e-19 98.2 276 27.2
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 9.8e-19 98.2 276 27.9
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 1.3e-18 97.8 275 30.2
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 2.8e-18 96.7 259 32.0
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 2.8e-18 96.7 272 26.8
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.7e-18 96.3 265 30.9
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 4.8e-18 95.9 278 26.6
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.8e-18 95.9 265 31.7
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 6.3e-18 95.5 284 27.1
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 1.1e-17 94.7 262 29.8
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 4.1e-17 92.8 281 27.4
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 5.4e-17 92.4 265 27.9
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 5.4e-17 92.4 251 27.5
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 7.0e-17 92.0 266 27.8
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.2e-16 91.3 266 28.2
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 7.7e-16 88.6 283 26.9
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 2.9e-15 86.7 245 26.9
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 6.6e-15 85.5 275 24.4
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 6.6e-15 85.5 277 26.4
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.1e-14 84.7 266 28.2
Psat6g114480 Pisum sativum HOM05D007097 ORTHO05D008131 1.1e-14 84.7 222 30.6
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 1.5e-14 84.3 273 22.7
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 3.3e-14 83.2 271 27.3
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 3.6e-13 79.7 273 27.1
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 6.1e-13 79.0 275 23.3
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 8.0e-13 78.6 242 25.6
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.0e-12 78.2 275 26.5
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 1.4e-12 77.8 248 25.4
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.0e-12 76.3 251 29.1
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.5e-11 74.3 108 39.8
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 5.7e-11 72.4 101 33.7
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 7.5e-11 72.0 101 33.7
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 7.5e-11 72.0 292 24.3
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 7.5e-11 72.0 263 23.2
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 9.8e-11 71.6 249 27.3
Medtr1g057590 Medicago truncatula HOM05D007097 ORTHO05D008131 9.8e-11 71.6 46 65.2
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 2.2e-10 70.5 125 31.2
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 2.8e-10 70.1 271 24.7
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 2.8e-10 70.1 264 22.7
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 3.7e-10 69.7 263 31.9
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 3.7e-10 69.7 104 32.7
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 3.7e-10 69.7 266 23.7
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 3.7e-10 69.7 265 23.8
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 4.9e-10 69.3 295 24.7
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 4.9e-10 69.3 107 35.5
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 8.3e-10 68.6 257 24.5
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.1e-09 68.2 265 23.8
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 1.8e-09 67.4 248 25.4
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 2.4e-09 67.0 259 26.6
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 2.4e-09 67.0 81 40.7
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 2.4e-09 67.0 272 22.8
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 3.2e-09 66.6 271 22.9
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 4.1e-09 66.2 257 22.6
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 9.2e-09 65.1 249 25.3
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 9.2e-09 65.1 181 24.3
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 1.6e-08 64.3 214 25.7
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.5e-08 63.2 109 34.9
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 3.5e-08 63.2 159 30.8
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 1.7e-07 60.8 249 25.3
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 2.3e-07 60.5 87 33.3
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 2.5e-06 57.0 252 29.8
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 7.3e-06 55.5 41 56.1


User provided reference genes

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