Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 2.9e-213 745.0 380 100.0
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 2.0e-129 466.5 380 63.2
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.9e-124 449.9 381 61.9
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.4e-114 417.2 380 56.6
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 2.5e-111 406.4 370 55.9
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 1.2e-110 404.1 378 56.3
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 4.6e-110 402.1 369 56.6
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 3.1e-106 389.4 371 55.8
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 5.0e-96 355.5 347 51.3
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 3.2e-95 352.8 372 49.7
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 3.9e-93 345.9 371 47.4
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 8.8e-93 344.7 372 47.0
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 2.6e-92 343.2 224 72.8
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 7.4e-92 341.7 297 59.9
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.3e-91 340.9 368 48.1
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 3.7e-91 339.3 364 48.9
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.8e-90 337.0 380 46.8
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 7.7e-89 331.6 371 45.8
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 2.2e-88 330.1 368 47.6
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 3.8e-88 329.3 372 45.7
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 8.5e-88 328.2 405 44.4
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 1.5e-87 327.4 371 45.6
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.9e-87 327.0 405 44.4
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 5.5e-87 325.5 345 46.4
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 7.2e-87 325.1 371 47.2
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 9.4e-87 324.7 351 47.3
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 4.7e-86 322.4 371 47.2
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 8.0e-86 321.6 372 43.8
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.0e-85 321.2 350 46.3
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 1.0e-85 321.2 350 46.6
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.4e-85 320.9 354 47.2
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 2.3e-85 320.1 368 44.6
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 3.0e-85 319.7 372 46.2
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 4.0e-85 319.3 367 48.8
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 6.7e-85 318.5 364 45.1
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 6.7e-85 318.5 347 47.3
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 1.5e-84 317.4 371 45.0
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.5e-84 317.4 363 46.6
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.0e-84 317.0 368 44.6
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 2.6e-84 316.6 234 59.8
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.4e-84 315.8 385 44.9
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 7.5e-84 315.1 347 44.4
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 9.7e-84 314.7 372 44.9
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 2.2e-83 313.5 352 45.7
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.2e-83 313.5 346 47.1
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 2.8e-83 313.2 347 47.3
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 6.3e-83 312.0 372 43.5
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 1.1e-82 311.2 368 43.8
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 9.1e-82 308.1 368 44.8
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.9e-79 300.4 379 42.5
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 5.5e-79 298.9 347 44.7
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 5.5e-79 298.9 421 40.6
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 1.2e-78 297.7 350 44.0
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.1e-78 297.0 373 42.6
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.7e-78 296.6 347 45.8
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 6.1e-78 295.4 372 43.0
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 8.0e-78 295.0 347 42.4
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 5.2e-77 292.4 367 42.2
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 5.2e-77 292.4 429 38.9
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 5.2e-77 292.4 405 41.0
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.5e-76 290.8 347 44.7
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 2.6e-76 290.0 368 41.8
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 3.4e-76 289.7 367 41.1
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 3.4e-76 289.7 424 41.7
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.7e-76 288.9 354 44.9
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 1.7e-75 287.3 230 57.8
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 1.7e-75 287.3 370 42.7
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 8.3e-75 285.0 230 55.7
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 8.3e-75 285.0 244 57.4
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.1e-74 284.6 345 42.3
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.4e-74 284.3 395 40.3
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 1.8e-74 283.9 236 55.5
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.8e-74 283.9 218 58.7
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 4.1e-74 282.7 292 49.7
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 7.0e-74 282.0 211 58.3
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.0e-73 280.4 340 42.9
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 2.7e-73 280.0 322 47.2
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 1.0e-72 278.1 217 56.7
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.3e-72 277.7 276 51.1
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.7e-72 277.3 212 58.0
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.7e-72 277.3 212 58.0
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 2.3e-72 276.9 243 51.9
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 3.8e-72 276.2 230 57.8
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.1e-71 274.6 211 56.9
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 1.1e-71 274.6 212 57.5
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 9.5e-71 271.6 370 38.6
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.2e-68 264.6 402 38.1
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 1.2e-68 264.6 200 58.0
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 3.4e-68 263.1 228 52.2
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 1.4e-66 257.7 302 45.7
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 3.5e-65 253.1 297 46.1
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.1e-63 248.1 302 45.4
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 4.0e-61 239.6 297 44.4
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 5.2e-61 239.2 295 42.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 2.6e-60 236.9 295 41.4
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 2.6e-60 236.9 301 42.9
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 4.9e-59 232.6 288 44.8
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 9.2e-58 228.4 191 54.5
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 1.6e-57 227.6 314 38.9
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.6e-54 217.6 172 55.8
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 6.2e-54 215.7 337 38.0
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 5.2e-53 212.6 283 43.5
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 6.8e-53 212.2 253 45.5
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 9.8e-52 208.4 183 53.6
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 7.0e-50 202.2 246 40.7
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 8.6e-48 195.3 233 42.1
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 8.6e-48 195.3 158 58.9
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 6.4e-43 179.1 239 37.2
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.7e-40 171.0 155 49.7
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 3.9e-40 169.9 134 59.7
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 4.2e-34 149.8 184 35.9
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.8e-29 134.4 130 50.0
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 5.3e-29 132.9 149 49.0
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 5.8e-28 129.4 168 42.3
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 4.9e-27 126.3 165 40.6
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.2e-17 95.1 93 54.8
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 2.1e-17 94.4 203 31.5
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 3.8e-11 73.6 59 52.5
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 4.6e-09 66.6 112 39.3
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 6.7e-08 62.8 73 42.5


User provided reference genes

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