Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 1.3e-60 236.1 113 100.0
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 5.9e-45 184.1 122 77.0
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 1.6e-42 176.0 121 76.9
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 2.8e-39 165.2 117 73.5
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 9.1e-38 160.2 111 73.0
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 1.2e-37 159.8 120 70.8
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 5.0e-36 154.5 117 69.2
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 1.0e-33 146.7 117 68.4
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 1.2e-32 143.3 125 60.8
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 1.5e-32 142.9 114 66.7
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 1.5e-32 142.9 81 82.7
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 2.6e-32 142.1 115 67.8
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.7e-31 139.4 85 77.6
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 2.8e-31 138.7 113 64.6
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 3.7e-31 138.3 95 71.6
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 4.9e-31 137.9 82 76.8
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 6.3e-31 137.5 77 84.4
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 6.3e-31 137.5 149 53.0
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 8.3e-31 137.1 80 78.8
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 8.3e-31 137.1 95 70.5
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 8.3e-31 137.1 79 81.0
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.1e-30 136.7 80 78.8
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 1.1e-30 136.7 81 79.0
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 1.1e-30 136.7 85 75.3
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 1.4e-30 136.3 110 60.9
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 1.8e-30 136.0 112 63.4
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 1.8e-30 136.0 80 77.5
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.8e-30 136.0 88 72.7
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 1.8e-30 136.0 80 73.8
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 2.4e-30 135.6 91 70.3
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 3.1e-30 135.2 113 63.7
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 3.1e-30 135.2 80 76.2
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 4.1e-30 134.8 88 71.6
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 4.1e-30 134.8 113 61.1
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 5.4e-30 134.4 78 78.2
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 5.4e-30 134.4 121 58.7
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 5.4e-30 134.4 101 66.3
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 7.0e-30 134.0 97 67.0
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 9.2e-30 133.7 97 71.1
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 1.2e-29 133.3 80 75.0
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 1.2e-29 133.3 80 75.0
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 1.2e-29 133.3 80 75.0
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 1.2e-29 133.3 79 79.7
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 1.6e-29 132.9 80 75.0
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 1.6e-29 132.9 80 75.0
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 1.6e-29 132.9 80 75.0
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 2.0e-29 132.5 95 70.5
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 2.0e-29 132.5 81 77.8
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 2.0e-29 132.5 112 58.9
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 3.5e-29 131.7 81 75.3
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 3.5e-29 131.7 86 69.8
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 4.5e-29 131.3 79 77.2
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 4.5e-29 131.3 77 77.9
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 4.5e-29 131.3 78 78.2
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 5.9e-29 131.0 79 78.5
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 7.8e-29 130.6 76 78.9
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 1.0e-28 130.2 88 71.6
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.3e-28 129.8 75 78.7
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 1.3e-28 129.8 90 70.0
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 1.3e-28 129.8 112 58.0
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 1.3e-28 129.8 83 72.3
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 2.3e-28 129.0 77 76.6
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 2.3e-28 129.0 113 58.4
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 2.9e-28 128.6 79 77.2
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 2.9e-28 128.6 77 75.3
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 3.8e-28 128.3 79 75.9
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 5.0e-28 127.9 79 75.9
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.6e-28 127.5 77 77.9
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.6e-28 127.5 77 77.9
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.6e-28 127.5 77 77.9
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.6e-28 127.5 77 77.9
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 8.6e-28 127.1 84 69.0
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 8.6e-28 127.1 79 74.7
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 8.6e-28 127.1 79 74.7
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 8.6e-28 127.1 77 76.6
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 1.1e-27 126.7 77 76.6
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 1.5e-27 126.3 83 71.1
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 1.5e-27 126.3 83 71.1
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 1.9e-27 125.9 83 68.7
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.5e-27 125.6 79 73.4
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 3.3e-27 125.2 73 78.1
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 3.3e-27 125.2 82 72.0
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 3.3e-27 125.2 77 74.0
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 3.3e-27 125.2 77 74.0
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 9.5e-27 123.6 114 58.8
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.2e-26 123.2 81 72.8
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 1.6e-26 122.9 91 69.2
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 1.6e-26 122.9 77 74.0
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 2.8e-26 122.1 113 55.8
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 3.6e-26 121.7 84 70.2
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 3.6e-26 121.7 77 71.4
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.4e-25 119.8 73 74.0
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 3.0e-25 118.6 83 67.5
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 1.2e-24 116.7 69 72.5
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.2e-24 116.7 72 72.2
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 4.4e-24 114.8 86 64.0
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 7.5e-24 114.0 86 64.0
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.7e-23 112.8 84 60.7
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 9.2e-22 107.1 65 75.4
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 9.2e-22 107.1 90 56.7
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.3e-20 103.2 96 55.2
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 8.6e-20 100.5 75 58.7
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 1.9e-19 99.4 97 57.7
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 3.2e-14 82.0 83 57.8
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 4.6e-13 78.2 62 53.2
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 7.3e-11 70.9 74 51.4
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 2.1e-10 69.3 101 46.5
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 5.8e-08 61.2 26 96.2
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 3.2e-06 55.5 45 60.0
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 5.4e-06 54.7 80 41.2
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 7.1e-06 54.3 45 62.2


User provided reference genes

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