Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27679 Trifolium pratense HOM05D003238 ORTHO05D003571 2.8e-32 141.7 94 100.0
Medtr8g017610 Medicago truncatula HOM05D003238 ORTHO05D003571 2.0e-22 109.0 97 81.4
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 1.6e-19 99.4 97 76.3
Lalb_Chr04g0263271 Lupinus albus HOM05D003238 ORTHO05D003571 7.9e-19 97.1 97 77.3
Ca_23334_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 1.0e-18 96.7 94 79.8
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 1.3e-18 96.3 89 78.7
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 4.3e-17 91.3 89 75.3
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 7.4e-17 90.5 96 66.7
TWI79G0340 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 2.8e-16 88.6 92 71.7
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 3.7e-16 88.2 93 74.2
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 1.8e-15 85.9 96 68.8
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 2.0e-14 82.4 88 68.2
Manes.11G024400 Manihot esculenta HOM05D003238 ORTHO05D003571 2.6e-14 82.0 90 66.7
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 7.7e-14 80.5 88 69.3
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 1.3e-13 79.7 86 69.8
Thecc.06G114200 Theobroma cacao HOM05D003238 ORTHO05D003571 1.7e-13 79.3 88 70.5
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 2.2e-13 79.0 89 69.7
arahy.Tifrunner.gnm1.ann1.7T9QNI Arachis hypogaea HOM05D003238 ORTHO05D003571 3.8e-13 78.2 88 70.5
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 5.0e-13 77.8 86 68.6
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 6.5e-13 77.4 96 67.7
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 6.5e-13 77.4 89 67.4
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 2.5e-12 75.5 89 67.4
MBI04_g36912_MAGBIO Magnolia biondii HOM05D003238 ORTHO05D003571 2.5e-12 75.5 83 67.5
PGR102G1556 Punica granatum HOM05D003238 ORTHO05D003571 2.5e-12 75.5 80 72.5
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 3.2e-12 75.1 57 61.4
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 7.2e-12 73.9 92 62.0
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 7.2e-12 73.9 89 65.2
Atru.chr1.3787 Acer truncatum HOM05D003238 ORTHO05D003571 9.4e-12 73.6 96 65.6
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 9.4e-12 73.6 88 65.9
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 9.4e-12 73.6 88 65.9
GSVIVG01016802001 Vitis vinifera HOM05D003238 ORTHO05D003571 9.4e-12 73.6 94 64.9
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 1.2e-11 73.2 89 66.3
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 1.2e-11 73.2 88 65.9
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 1.2e-11 73.2 88 65.9
arahy.Tifrunner.gnm1.ann1.HS5001 Arachis hypogaea HOM05D003238 ORTHO05D003571 1.6e-11 72.8 85 69.4
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 2.1e-11 72.4 98 65.3
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 2.1e-11 72.4 95 63.2
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 2.7e-11 72.0 95 62.1
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 4.6e-11 71.2 98 59.2
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 4.6e-11 71.2 88 63.6
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 4.6e-11 71.2 88 63.6
FAN26G1453 Fragaria x ananassa HOM05D003238 ORTHO05D003571 4.6e-11 71.2 92 58.7
FvH4_1g07820 Fragaria vesca HOM05D003238 ORTHO05D003571 6.1e-11 70.9 92 60.9
FAN19G2918 Fragaria x ananassa HOM05D003238 ORTHO05D003571 6.1e-11 70.9 92 60.9
Cc04_g01740 Coffea canephora HOM05D003238 ORTHO05D003571 7.9e-11 70.5 88 67.0
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.4e-10 69.7 95 60.0
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 1.8e-10 69.3 99 58.6
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 1.8e-10 69.3 99 58.6
FAN28G2679 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.8e-10 69.3 92 60.9
ClCG09G000780 Citrullus lanatus HOM05D003238 ORTHO05D003571 2.3e-10 68.9 89 67.4
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 2.3e-10 68.9 88 64.8
RcHm_v2.0_Chr2g0093691 Rosa chinensis HOM05D003238 ORTHO05D003571 3.0e-10 68.6 90 58.9
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 3.0e-10 68.6 88 61.4
PSO210G1081 Papaver somniferum HOM05D003238 ORTHO05D003571 3.9e-10 68.2 88 62.5
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 3.9e-10 68.2 86 64.0
HPP92_007657 Vanilla planifolia HOM05D003238 ORTHO05D003571 8.8e-10 67.0 91 57.1
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 1.1e-09 66.6 99 57.6
MSTRG.6003 Avicennia marina HOM05D003238 ORTHO05D003571 1.5e-09 66.2 95 58.9
Nitab4.5_0002824g0070 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.5e-09 66.2 95 63.2
PSO210G2488 Papaver somniferum HOM05D003238 ORTHO05D003571 1.5e-09 66.2 88 61.4
CANSAT56G1439 Cannabis sativa HOM05D003238 ORTHO05D003571 2.0e-09 65.9 84 65.5
MD02G1082200 Malus domestica HOM05D003238 ORTHO05D003571 2.0e-09 65.9 88 59.1
Potri.017G119600 Populus trichocarpa HOM05D003238 ORTHO05D003571 2.0e-09 65.9 81 65.4
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 2.5e-09 65.5 79 70.9
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.5e-09 65.5 72 69.4
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.5e-09 65.5 72 70.8
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 2.5e-09 65.5 88 61.4
Sc15g0000270 Simmondsia chinensis HOM05D003238 ORTHO05D003571 2.5e-09 65.5 84 59.5
TWI32G0644 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.3e-09 65.1 90 60.0
Actinidia39710 Actinidia chinensis HOM05D003238 ORTHO05D003571 5.7e-09 64.3 87 59.8
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 5.7e-09 64.3 88 60.2
Oeu017609.1 Olea europaea HOM05D003238 ORTHO05D003571 5.7e-09 64.3 86 62.8
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 7.4e-09 63.9 75 64.0
Thecc.09G086100 Theobroma cacao HOM05D003238 ORTHO05D003571 7.4e-09 63.9 93 63.4
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 1.3e-08 63.2 87 57.5
Hund20825 Selenicereus undatus HOM05D003238 ORTHO05D003571 1.3e-08 63.2 80 65.0
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 2.2e-08 62.4 88 59.1
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 2.2e-08 62.4 77 67.5
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 2.8e-08 62.0 94 59.6
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 3.7e-08 61.6 87 58.6
AUR62009849 Chenopodium quinoa HOM05D003238 ORTHO05D003571 3.7e-08 61.6 77 58.4
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 4.8e-08 61.2 82 63.4
CARHR065610 Cardamine hirsuta HOM05D003238 ORTHO05D003571 1.4e-07 59.7 91 64.8
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 1.4e-07 59.7 46 58.7
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 1.4e-07 59.7 93 59.1
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 1.8e-07 59.3 89 61.8
VMungo0720G2789 Vigna mungo HOM05D003238 ORTHO05D003571 1.8e-07 59.3 44 65.9
Duzib168G0217 Durio zibethinus HOM05D003238 ORTHO05D003571 2.4e-07 58.9 91 62.6
Oeu004201.1 Olea europaea HOM05D003238 ORTHO05D003571 2.4e-07 58.9 85 60.0
Sp5g27750 Schrenkiella parvula HOM05D003238 ORTHO05D003571 2.4e-07 58.9 56 58.9
vmacro23045 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 2.4e-07 58.9 83 63.9
Atru.chr7.1621 Acer truncatum HOM05D003238 ORTHO05D003571 5.3e-07 57.8 58 50.0
ATR0789G083 Amborella trichopoda HOM05D003238 ORTHO05D003571 5.3e-07 57.8 82 59.8
BraA10t43522Z Brassica rapa HOM05D003238 ORTHO05D003571 6.9e-07 57.4 90 36.7
SGA_v2.0_scaffold10G05235 Striga asiatica HOM05D002348 ORTHO05D002512 6.9e-07 57.4 98 35.7
EL10Ac7g16367 Beta vulgaris HOM05D003238 ORTHO05D003571 9.1e-07 57.0 44 63.6
A09p28910 Brassica napus HOM05D003238 ORTHO05D003571 9.1e-07 57.0 54 57.4
C06p34720 Brassica napus HOM05D003238 ORTHO05D003571 9.1e-07 57.0 54 57.4
BraA09t38454Z Brassica rapa HOM05D003238 ORTHO05D003571 9.1e-07 57.0 54 57.4
Sopen06g022220 Solanum pennellii HOM05D003238 ORTHO05D003571 9.1e-07 57.0 72 68.1
Ca_26161_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 1.5e-06 56.2 83 43.4
Manes.16G100500 Manihot esculenta HOM05D003238 ORTHO05D003571 1.5e-06 56.2 78 57.7
Prupe.3G046400 Prunus persica HOM05D003238 ORTHO05D003571 1.5e-06 56.2 94 42.6
CDE05G2517 Ceratophyllum demersum HOM05D003238 ORTHO05D003571 2.0e-06 55.8 94 51.1
Medtr2g039890 Medicago truncatula HOM05D003238 ORTHO05D003571 2.0e-06 55.8 55 49.1
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 2.0e-06 55.8 97 54.6
Solyc06g062765.1 Solanum lycopersicum HOM05D003238 ORTHO05D003571 2.0e-06 55.8 72 68.1
Thhalv10019375m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 2.6e-06 55.5 57 52.6
Gohir.D07G012200 Gossypium hirsutum HOM05D001717 ORTHO05D007217 2.6e-06 55.5 85 61.2
Nitab4.5_0009992g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 3.4e-06 55.1 59 50.8
Gorai.001G012800 Gossypium raimondii HOM05D003238 ORTHO05D003571 4.5e-06 54.7 85 60.0
AL2G32370 Arabidopsis lyrata HOM05D003238 ORTHO05D003571 5.9e-06 54.3 77 58.4
HPP92_005498 Vanilla planifolia HOM05D003238 ORTHO05D003571 7.7e-06 53.9 50 48.0


User provided reference genes

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