Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27632 Trifolium pratense HOM05D004824 ORTHO05D003903 1.4e-120 436.8 311 100.0
TPR.G33412 Trifolium pratense HOM05D004824 ORTHO05D003903 4.2e-101 372.1 308 89.6
TPR.G25583 Trifolium pratense HOM05D004824 ORTHO05D003903 6.5e-94 348.2 315 82.5
TPR.G33705 Trifolium pratense HOM05D002450 ORTHO05D002953 8.6e-62 241.5 298 65.1
Psat3g199560 Pisum sativum HOM05D004824 ORTHO05D003903 1.2e-42 177.9 319 57.4
Medtr3g091500 Medicago truncatula HOM05D004824 ORTHO05D003903 3.0e-30 136.7 237 54.4
Medtr7g011520 Medicago truncatula HOM05D004824 ORTHO05D003903 7.1e-24 115.5 167 41.9
Medtr1g113020 Medicago truncatula HOM05D004824 ORTHO05D003903 9.3e-16 88.6 93 74.2
Psat3g199520 Pisum sativum HOM05D004824 ORTHO05D003903 6.0e-15 85.9 142 39.4
arahy.Tifrunner.gnm1.ann1.SR7DDI Arachis hypogaea HOM05D004824 ORTHO05D003903 5.1e-14 82.8 93 47.3
arahy.Tifrunner.gnm1.ann1.XC7PBP Arachis hypogaea HOM05D004824 ORTHO05D003903 6.7e-14 82.4 93 46.2
VMungo0251G2839 Vigna mungo HOM05D004824 ORTHO05D003903 2.5e-13 80.5 66 56.1
Glyma.07G217800 Glycine max HOM05D004824 ORTHO05D003903 7.4e-13 79.0 59 57.6
MD05G1241200 Malus domestica HOM05D004824 ORTHO05D003903 9.6e-13 78.6 100 37.0
Glyma.05G060900 Glycine max HOM05D004824 ORTHO05D003903 2.8e-12 77.0 59 55.9
SHI24599 Sapria himalayana HOM05D008459 ORTHO05D003903 6.2e-12 75.9 254 28.3
Nitab4.5_0008978g0030 Nicotiana tabacum HOM05D004824 ORTHO05D003903 1.8e-11 74.3 148 33.1
Lalb_Chr10g0093361 Lupinus albus HOM05D004824 ORTHO05D003903 3.1e-11 73.6 57 61.4
ClCG06G012000 Citrullus lanatus HOM05D004824 ORTHO05D003903 5.3e-11 72.8 146 30.1
Phvul.008G038900 Phaseolus vulgaris HOM05D004824 ORTHO05D003903 5.3e-11 72.8 56 57.1
Sed0004559 Sechium edule HOM05D004824 ORTHO05D003903 3.4e-10 70.1 139 30.9
Ca_06791_v3 Cicer arietinum L. HOM05D004824 ORTHO05D003903 1.0e-09 68.6 76 51.3
Potri.004G066600 Populus trichocarpa HOM05D004824 ORTHO05D003903 1.3e-09 68.2 143 32.2
TPR.G4149 Trifolium pratense HOM05D004824 ORTHO05D003903 1.7e-09 67.8 103 38.8
Actinidia04364 Actinidia chinensis HOM05D004824 ORTHO05D003903 2.2e-09 67.4 63 46.0
ECA246G3641 Erigeron canadensis HOM05D005906 ORTHO05D007359 6.5e-09 65.9 155 31.0
Lj1g0015996 Lotus japonicus HOM05D000005 ORTHO05D000012 8.4e-09 65.5 46 67.4
MSTRG.2666 Avicennia marina HOM05D004824 ORTHO05D003903 1.9e-08 64.3 69 39.1
TPR.G25560 Trifolium pratense HOM05D004824 ORTHO05D003903 1.9e-08 64.3 77 46.8
Manes.02G087700 Manihot esculenta HOM05D004824 ORTHO05D003903 2.5e-08 63.9 50 48.0
MD10G1219600 Malus domestica HOM05D004824 ORTHO05D003903 4.2e-08 63.2 62 41.9
RcHm_v2.0_Chr5g0022931 Rosa chinensis HOM05D004824 ORTHO05D003903 4.2e-08 63.2 81 42.0
FvH4_3g13690 Fragaria vesca HOM05D004824 ORTHO05D003903 5.5e-08 62.8 82 42.7
FAN11G3130 Fragaria x ananassa HOM05D004824 ORTHO05D003903 5.5e-08 62.8 82 42.7
FAN16G0917 Fragaria x ananassa HOM05D001160 ORTHO05D001092 5.5e-08 62.8 82 42.7
FAN25G3679 Fragaria x ananassa HOM05D004824 ORTHO05D003903 5.5e-08 62.8 82 42.7
Lj1g0000290 Lotus japonicus HOM05D004824 ORTHO05D003903 9.3e-08 62.0 49 59.2
Prupe.4G124300 Prunus persica HOM05D004824 ORTHO05D003903 9.3e-08 62.0 70 40.0
TWI63G0852 Tripterygium wilfordii HOM05D004824 ORTHO05D003903 9.3e-08 62.0 60 46.7
Sabra04G0044400 Salix brachista HOM05D004824 ORTHO05D003903 1.2e-07 61.6 142 31.0
arahy.Tifrunner.gnm1.ann1.F7MB9I Arachis hypogaea HOM05D004824 ORTHO05D003903 1.6e-07 61.2 123 35.8
HanXRQChr12g0366191 Helianthus annuus HOM05D004824 ORTHO05D003903 2.1e-07 60.8 140 32.1
Manes.10G060400 Manihot esculenta HOM05D004824 ORTHO05D003903 2.7e-07 60.5 78 37.2
Nitab4.5_0000391g0190 Nicotiana tabacum HOM05D004824 ORTHO05D003903 2.7e-07 60.5 66 40.9
Solyc05g012920.3 Solanum lycopersicum HOM05D004824 ORTHO05D003903 2.7e-07 60.5 144 28.5
Dinv16084 Davidia involucrata HOM05D004824 ORTHO05D003903 3.5e-07 60.1 74 41.9
Oeu060442.1 Olea europaea HOM05D004824 ORTHO05D003903 6.0e-07 59.3 64 40.6
Sopen05g007720 Solanum pennellii HOM05D004824 ORTHO05D003903 6.0e-07 59.3 63 41.3
Lsat_1_v5_gn_8_33440 Lactuca sativa HOM05D004824 ORTHO05D003903 7.9e-07 58.9 141 31.2
SalBow7G1004 Salvia bowleyana HOM05D004824 ORTHO05D003903 2.3e-06 57.4 75 33.3
Sc12g0010940 Simmondsia chinensis HOM05D004824 ORTHO05D003903 2.3e-06 57.4 71 38.0
Lj1g0019375 Lotus japonicus HOM05D004824 ORTHO05D003903 3.9e-06 56.6 72 43.1
CSS0000296 Camellia sinensis var. sinensis HOM05D004824 ORTHO05D003903 6.7e-06 55.8 59 42.4
SHI33202 Sapria himalayana HOM05D008459 ORTHO05D003903 6.7e-06 55.8 137 28.5
VMungo1383G0602 Vigna mungo HOM05D004824 ORTHO05D003903 8.7e-06 55.5 48 47.9


User provided reference genes

Program Settings