Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27557 Trifolium pratense HOM05D007763 ORTHO05D009537 2.3e-75 285.4 136 100.0
Ca_14664_v3 Cicer arietinum L. HOM05D007763 ORTHO05D009537 1.3e-43 179.9 127 69.3
Lalb_Chr08g0235511 Lupinus albus HOM05D007763 ORTHO05D009537 1.1e-34 150.2 123 62.6
LjContig00102g0005353 Lotus japonicus HOM05D000001 ORTHO05D010304 3.7e-33 145.2 121 60.3
Phvul.009G185566 Phaseolus vulgaris HOM05D007763 ORTHO05D009537 1.3e-30 136.7 121 57.9
CSS0022156 Camellia sinensis var. sinensis HOM05D007763 ORTHO05D009537 5.5e-29 131.3 120 53.3
Psat5g201000 Pisum sativum HOM05D007763 ORTHO05D009537 9.7e-26 120.6 110 58.2
Medtr3g037490 Medicago truncatula HOM05D007763 ORTHO05D009537 2.2e-25 119.4 108 57.4
Thecc.03G093400 Theobroma cacao HOM05D007763 ORTHO05D009537 8.2e-25 117.5 126 48.4
Ciclev10024595m.g Citrus clementina HOM05D007763 ORTHO05D009537 6.9e-24 114.4 130 48.5
RcHm_v2.0_Chr7g0181881 Rosa chinensis HOM05D007763 ORTHO05D009537 1.2e-23 113.6 123 49.6
arahy.Tifrunner.gnm1.ann1.NWYI6Z Arachis hypogaea HOM05D000001 ORTHO05D010304 2.6e-23 112.5 119 49.6
FvH4_5g14610 Fragaria vesca HOM05D007763 ORTHO05D009537 7.6e-23 110.9 98 55.1
arahy.Tifrunner.gnm1.ann1.PFL66H Arachis hypogaea HOM05D007763 ORTHO05D009537 1.0e-22 110.5 79 64.6
FAN18G1924 Fragaria x ananassa HOM05D007763 ORTHO05D009537 8.5e-22 107.5 98 54.1
COL.COLO4_36930 Corchorus olitorius HOM05D007763 ORTHO05D009537 1.9e-21 106.3 116 49.1
Atru.chr12.1670 Acer truncatum HOM05D007763 ORTHO05D009537 3.2e-21 105.5 120 46.7
FAN13G0255 Fragaria x ananassa HOM05D007763 ORTHO05D009537 7.2e-21 104.4 99 50.5
vmacro17568 Vaccinium macrocarpon HOM05D007763 ORTHO05D009537 2.1e-20 102.8 109 46.8
ECA246G2275 Erigeron canadensis HOM05D007763 ORTHO05D009537 6.1e-20 101.3 125 42.4
THA.LOC104801471 Tarenaya hassleriana HOM05D007763 ORTHO05D009537 7.9e-20 100.9 94 46.8
Lsat_1_v5_gn_5_21540 Lactuca sativa HOM05D007763 ORTHO05D009537 1.4e-19 100.1 107 43.9
Aa31LG11G2020 Aethionema arabicum HOM05D007763 ORTHO05D009537 1.8e-19 99.8 94 46.8
Rhsim08G0152400 Rhododendron simsii HOM05D000001 ORTHO05D010304 3.9e-19 98.6 119 41.2
Atru.chr12.1664 Acer truncatum HOM05D007763 ORTHO05D009537 5.1e-19 98.2 101 47.5
AUR62021645 Chenopodium quinoa HOM05D007763 ORTHO05D009537 1.9e-18 96.3 127 39.4
BraA09t36381Z Brassica rapa HOM05D007763 ORTHO05D009537 5.7e-18 94.7 95 47.4
Gohir.D03G094100 Gossypium hirsutum HOM05D007763 ORTHO05D009537 7.4e-18 94.4 118 41.5
Gorai.003G098200 Gossypium raimondii HOM05D007763 ORTHO05D009537 7.4e-18 94.4 117 41.9
CARHR275160 Cardamine hirsuta HOM05D007763 ORTHO05D009537 1.3e-17 93.6 95 45.3
Gohir.A03G067600 Gossypium hirsutum HOM05D007763 ORTHO05D009537 1.3e-17 93.6 117 41.9
BcaC04g23450 Brassica carinata HOM05D007763 ORTHO05D009537 2.8e-17 92.4 95 46.3
BcaNung06902 Brassica carinata HOM05D007763 ORTHO05D009537 2.8e-17 92.4 87 48.3
C09p08190 Brassica napus HOM05D007763 ORTHO05D009537 2.8e-17 92.4 95 46.3
BolC9t53731H Brassica oleracea HOM05D007763 ORTHO05D009537 2.8e-17 92.4 95 46.3
HanXRQChr08g0236691 Helianthus annuus HOM05D007763 ORTHO05D009537 2.8e-17 92.4 102 43.1
AL8G38070 Arabidopsis lyrata HOM05D007763 ORTHO05D009537 8.2e-17 90.9 93 45.2
Thhalv10005336m.g Eutrema salsugineum HOM05D007763 ORTHO05D009537 1.8e-16 89.7 91 46.2
Atru.chr12.1659 Acer truncatum HOM05D007763 ORTHO05D009537 2.4e-16 89.4 122 41.8
Actinidia04871 Actinidia chinensis HOM05D007763 ORTHO05D009537 3.1e-16 89.0 126 38.9
Carub.0008s2207 Capsella rubella HOM05D007763 ORTHO05D009537 1.5e-15 86.7 89 43.8
Ah.02g113700 Amaranthus hybridus HOM05D007763 ORTHO05D009537 4.5e-15 85.1 97 40.2
Lj9C466T13 Lonicera japonica HOM05D007763 ORTHO05D009537 6.5e-14 81.3 78 48.7
Hma1.2p1_0060F.1_g033520 Hydrangea macrophylla HOM05D007763 ORTHO05D009537 4.2e-13 78.6 128 34.4
Duzib205G0970 Durio zibethinus HOM05D007763 ORTHO05D009537 1.2e-12 77.0 70 51.4
Glyma.06G196100 Glycine max HOM05D007763 ORTHO05D021545 2.1e-12 76.3 47 78.7
EL10Ac5g11053 Beta vulgaris HOM05D014602 ORTHO05D009537 2.7e-12 75.9 132 31.8
Sopen06g027000 Solanum pennellii HOM05D007763 ORTHO05D009537 7.9e-12 74.3 74 43.2
Solyc06g069700.4 Solanum lycopersicum HOM05D007763 ORTHO05D009537 1.0e-11 73.9 74 41.9
Nitab4.5_0003021g0070 Nicotiana tabacum HOM05D007763 ORTHO05D009537 1.8e-11 73.2 127 32.3
TPR.G11825 Trifolium pratense HOM05D007763 ORTHO05D009537 1.8e-11 73.2 63 58.7
TWI60G1313 Tripterygium wilfordii HOM05D007763 ORTHO05D009537 1.8e-11 73.2 114 37.7
CAN.G587.9 Capsicum annuum HOM05D007763 ORTHO05D009537 5.1e-11 71.6 70 45.7
Peaxi162Scf00013g00410 Petunia axillaris HOM05D007763 ORTHO05D009537 5.1e-11 71.6 74 39.2
Manes.14G081200 Manihot esculenta HOM05D007763 ORTHO05D009537 6.7e-11 71.2 107 37.4
MSTRG.11374 Avicennia marina HOM05D007763 ORTHO05D009537 1.1e-10 70.5 105 35.2
Migut.I00207 Erythranthe guttata HOM05D007763 ORTHO05D009537 3.3e-10 68.9 122 31.1
Nitab4.5_0004286g0010 Nicotiana tabacum HOM05D007763 ORTHO05D009537 9.7e-10 67.4 116 34.5
Haze_07298 Corylus avellana HOM05D007763 ORTHO05D010304 3.1e-08 62.4 57 50.9
PGR031G2821 Punica granatum HOM05D007763 ORTHO05D009537 3.1e-08 62.4 82 43.9
MBI02_g14230_MAGBIO Magnolia biondii HOM05D007763 ORTHO05D011706 2.0e-07 59.7 66 48.5
Sc12g0006490 Simmondsia chinensis HOM05D007763 ORTHO05D009537 4.5e-07 58.5 60 48.3
DCAR_002300 Daucus carota HOM05D007763 ORTHO05D009537 5.9e-07 58.2 122 29.5
AagrBONN_evm.TU.Sc2ySwM_368.367 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-06 57.0 107 30.8
AagrBONN_evm.TU.Sc2ySwM_117.2614 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.7e-06 56.6 109 28.4
Cfa018915 Carpinus fangiana HOM05D007763 ORTHO05D009537 1.7e-06 56.6 43 55.8
AagrBONN_evm.TU.Sc2ySwM_117.4156 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.2e-06 56.2 120 30.0
AagrBONN_evm.TU.Sc2ySwM_117.1747 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.8e-06 55.5 109 28.4
Sc06g0002690 Simmondsia chinensis HOM05D000001 ORTHO05D000003 5.0e-06 55.1 105 33.3
Aa31sc739G30 Aethionema arabicum HOM05D000001 ORTHO05D000003 6.5e-06 54.7 108 31.5
AagrBONN_evm.TU.Sc2ySwM_228.2595 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.5e-06 54.7 109 27.5
AagrBONN_evm.TU.Sc2ySwM_344.2215 Anthoceros agrestis HOM05D000001 ORTHO05D000003 6.5e-06 54.7 109 28.4
AT5G61400 Arabidopsis thaliana HOM05D007763 ORTHO05D009537 6.5e-06 54.7 64 42.2


User provided reference genes

Program Settings