Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2750 Trifolium pratense HOM05D004613 ORTHO05D006095 6.5e-171 604.0 306 100.0
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 6.8e-128 461.1 306 76.1
Medtr1g082380 Medicago truncatula HOM05D004613 ORTHO05D006095 1.1e-125 453.8 307 75.9
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 4.5e-124 448.4 302 75.5
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea HOM05D004613 ORTHO05D006095 9.8e-119 430.6 306 69.9
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 1.7e-118 429.9 289 76.1
Lalb_Chr02g0148411 Lupinus albus HOM05D004613 ORTHO05D006095 7.0e-117 424.5 306 71.6
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea HOM05D004613 ORTHO05D006095 9.5e-114 414.1 331 65.0
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 2.3e-107 392.9 271 76.0
Glyma.10G157300 Glycine max HOM05D004613 ORTHO05D006095 5.8e-103 378.3 302 67.9
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 3.7e-102 375.6 303 63.0
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 8.3e-102 374.4 339 59.9
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 1.1e-101 374.0 304 64.8
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 1.7e-99 366.7 302 62.3
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 1.1e-98 364.0 303 63.0
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 6.2e-97 358.2 299 62.9
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 1.1e-96 357.5 299 61.9
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 1.8e-96 356.7 301 60.1
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 3.1e-96 355.9 303 62.0
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 5.2e-96 355.1 299 62.9
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 2.6e-95 352.8 299 62.5
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 7.6e-95 351.3 299 63.2
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 2.2e-94 349.7 305 60.3
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 6.4e-94 348.2 300 61.0
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 8.4e-94 347.8 303 61.7
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 8.4e-94 347.8 301 60.1
PGR083G0604 Punica granatum HOM05D004613 ORTHO05D006095 1.9e-93 346.7 306 61.1
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 7.1e-93 344.7 301 58.5
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 9.2e-93 344.4 315 56.5
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 1.6e-92 343.6 307 60.3
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 2.7e-92 342.8 304 59.5
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 3.5e-92 342.4 307 60.3
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 4.6e-92 342.0 313 57.2
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 4.6e-92 342.0 301 57.5
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 4.6e-92 342.0 304 59.9
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 6.0e-92 341.7 315 55.9
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 6.0e-92 341.7 320 56.6
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 6.0e-92 341.7 301 60.1
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 1.3e-91 340.5 301 59.8
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 1.5e-90 337.0 274 60.2
Sc09g0003370 Simmondsia chinensis HOM05D004613 ORTHO05D006095 1.5e-90 337.0 301 59.5
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 1.9e-90 336.7 292 60.3
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 3.3e-90 335.9 301 59.8
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 5.6e-90 335.1 314 56.7
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 1.6e-89 333.6 298 58.4
CsaV3_1G039190 Cucumis sativus L. HOM05D004613 ORTHO05D006095 2.8e-89 332.8 247 67.2
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 1.1e-88 330.9 274 60.6
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 1.1e-88 330.9 306 60.5
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 1.4e-88 330.5 274 59.9
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 1.8e-88 330.1 314 55.1
CSS0015750 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.8e-88 330.1 229 70.7
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 4.0e-88 328.9 370 49.7
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 5.3e-88 328.6 246 66.7
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 9.0e-88 327.8 274 60.2
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 2.0e-87 326.6 316 55.1
Aqoxy2G03209 Aquilegia oxysepala HOM05D004613 ORTHO05D006095 2.6e-87 326.2 303 58.1
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 2.6e-87 326.2 314 54.8
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 7.6e-87 324.7 274 59.1
DCAR_015964 Daucus carota HOM05D004613 ORTHO05D006095 7.6e-87 324.7 231 68.8
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 1.7e-86 323.6 314 54.5
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 4.9e-86 322.0 329 52.9
Migut.B01124 Erythranthe guttata HOM05D004613 ORTHO05D006095 4.9e-86 322.0 218 72.0
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 8.4e-86 321.2 218 72.5
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 1.9e-85 320.1 329 52.6
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 3.2e-85 319.3 238 67.6
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 9.3e-85 317.8 266 62.0
CDE12G0359 Ceratophyllum demersum HOM05D004613 ORTHO05D006095 1.7e-83 313.5 199 72.9
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 2.3e-83 313.2 304 55.9
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 3.9e-83 312.4 305 57.4
GSVIVG01022058001 Vitis vinifera HOM05D004613 ORTHO05D006095 8.7e-83 311.2 195 73.8
Zm00001eb329390 Zea mays HOM05D004613 ORTHO05D006095 1.5e-82 310.5 219 64.4
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 1.6e-81 307.0 308 54.2
HPP92_006941 Vanilla planifolia HOM05D004613 ORTHO05D006095 6.9e-80 301.6 199 72.9
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 9.0e-80 301.2 274 59.1
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 3.4e-79 299.3 335 51.6
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 3.4e-79 299.3 302 55.0
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 3.4e-79 299.3 300 55.0
PGR083G1611 Punica granatum HOM05D004613 ORTHO05D006095 2.2e-78 296.6 305 54.4
Peaxi162Scf00434g00335 Petunia axillaris HOM05D004613 ORTHO05D006095 3.8e-78 295.8 213 67.6
Nitab4.5_0004940g0150 Nicotiana tabacum HOM05D004613 ORTHO05D006095 2.1e-76 290.0 275 56.7
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 2.3e-75 286.6 176 78.4
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 1.1e-74 284.3 285 59.3
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 1.5e-74 283.9 277 57.0
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 2.5e-74 283.1 275 56.4
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 6.9e-72 275.0 304 53.6
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 1.7e-70 270.4 199 68.3
SHI18214 Sapria himalayana HOM05D004613 ORTHO05D006095 2.4e-64 250.0 179 68.2
ClCG03G016790 Citrullus lanatus HOM05D000665 ORTHO05D006095 3.9e-59 232.6 468 37.6
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 3.7e-57 226.1 233 54.1
Cc02_g32610 Coffea canephora HOM05D004613 ORTHO05D006095 2.0e-55 220.3 257 50.2
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 3.2e-53 213.0 270 45.6
SalBow8G2842 Salvia bowleyana HOM05D004613 ORTHO05D006095 2.1e-52 210.3 245 46.9
SMO115G0217 Selaginella moellendorffii HOM05D004613 ORTHO05D006095 7.9e-52 208.4 212 50.0
Mapoly0007s0105 Marchantia polymorpha HOM05D004613 ORTHO05D006095 1.4e-51 207.6 214 49.1
Pp3c24_5170 Physcomitrium patens HOM05D004613 ORTHO05D006095 2.5e-50 203.4 201 46.3
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 5.7e-50 202.2 200 56.0
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 1.3e-49 201.1 182 57.7
SEGI_25140 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 4.1e-48 196.1 158 62.0
CBR_g37761 Chara braunii HOM05D004613 ORTHO05D006095 1.2e-44 184.5 210 45.2
SGA_v2.0_scaffold199G41179 Striga asiatica HOM05D004613 ORTHO05D006095 5.1e-43 179.1 274 43.1
AUR62000861 Chenopodium quinoa HOM05D004613 ORTHO05D006095 1.3e-41 174.5 157 58.6
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 2.2e-41 173.7 253 43.9
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 2.2e-41 173.7 288 41.3
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 6.5e-38 162.2 236 44.1
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 3.0e-35 153.3 125 61.6
unitig_747.g21346 Utricularia gibba HOM05D004613 ORTHO05D006095 6.3e-33 145.6 179 44.7
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 1.5e-29 134.4 279 37.6
Cc02_g32600 Coffea canephora HOM05D004613 ORTHO05D006095 1.7e-25 120.9 70 75.7
unitig_747.g21345 Utricularia gibba HOM05D004613 ORTHO05D006095 2.2e-25 120.6 68 79.4
MCO14G439 Micromonas commoda HOM05D004613 ORTHO05D006095 1.0e-22 111.7 204 32.8
MD04G1209900 Malus domestica HOM05D004613 ORTHO05D006095 4.0e-19 99.8 59 81.4
HanXRQChr13g0397031 Helianthus annuus HOM05D004613 ORTHO05D006095 1.3e-17 94.7 113 49.6
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis HOM05D004613 ORTHO05D006095 6.1e-12 75.9 93 43.0
SEGI_04064 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 6.1e-12 75.9 50 66.0
A09p05250 Brassica napus HOM05D004613 ORTHO05D006095 1.8e-11 74.3 49 71.4
Cre02.g117300 Chlamydomonas reinhardtii HOM05D004613 ORTHO05D006095 8.9e-11 72.0 167 32.3
C09p05710 Brassica napus HOM05D004613 ORTHO05D006095 2.0e-07 60.8 49 57.1
CSS0002320 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.0e-06 58.5 36 69.4
CSS0009134 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.0e-06 58.5 36 69.4
CSS0011661 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.0e-06 58.5 36 69.4
CSS0019992 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.0e-06 58.5 36 69.4
CSS0023662 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.0e-06 58.5 36 69.4
CSS0033019 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.0e-06 58.5 36 69.4
CSS0041443 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.0e-06 58.5 36 69.4
C04p20620 Brassica napus HOM05D000249 ORTHO05D032228 3.9e-06 56.6 28 82.1


User provided reference genes

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