Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27495 Trifolium pratense HOM05D000670 ORTHO05D025840 5.1e-117 424.5 220 100.0
TPR.G19144 Trifolium pratense HOM05D000670 ORTHO05D025840 7.4e-76 287.7 216 76.4
TPR.G36432 Trifolium pratense HOM05D000670 ORTHO05D025840 3.0e-61 239.2 193 73.1
Medtr2g104500 Medicago truncatula HOM05D000670 ORTHO05D025840 3.2e-31 139.4 201 50.7
Medtr2g104530 Medicago truncatula HOM05D000670 ORTHO05D025840 1.4e-26 124.0 204 47.5
Medtr2g104550 Medicago truncatula HOM05D000670 ORTHO05D000529 5.9e-17 92.0 226 38.5
Lj3g0013175 Lotus japonicus HOM05D000670 ORTHO05D000529 1.9e-15 87.0 235 34.9
Lalb_Chr24g0395361 Lupinus albus HOM05D000670 ORTHO05D000529 4.3e-15 85.9 238 36.6
Medtr2g104490 Medicago truncatula HOM05D000670 ORTHO05D000529 5.6e-15 85.5 221 38.5
Phvul.005G181300 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 1.2e-14 84.3 226 36.3
Glyma.13G368700 Glycine max HOM05D000670 ORTHO05D000529 1.4e-13 80.9 212 38.7
VMungo1080G1392 Vigna mungo HOM05D000670 ORTHO05D000529 3.1e-13 79.7 215 35.3
Medtr4g009540 Medicago truncatula HOM05D000670 ORTHO05D000529 4.0e-13 79.3 237 33.8
Glyma.08G215500 Glycine max HOM05D000670 ORTHO05D000529 5.2e-13 79.0 227 33.5
Glyma.07G027200 Glycine max HOM05D000670 ORTHO05D000529 6.8e-13 78.6 229 34.9
Phvul.010G158500 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 9.8e-12 74.7 202 29.2
Phvul.010G158400 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 2.2e-11 73.6 210 30.5
TPR.G19155 Trifolium pratense HOM05D000670 ORTHO05D000529 6.4e-11 72.0 77 57.1
Medtr4g009110 Medicago truncatula HOM05D000670 ORTHO05D000529 8.3e-11 71.6 248 33.1
Ca_26517_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 3.2e-10 69.7 118 43.2
Lj3g0006710 Lotus japonicus HOM05D000670 ORTHO05D000529 3.2e-10 69.7 212 34.4
Psat7g258400 Pisum sativum HOM05D000670 ORTHO05D000529 7.0e-10 68.6 219 32.9
Lalb_Chr25g0279151 Lupinus albus HOM05D000670 ORTHO05D000529 9.2e-10 68.2 225 31.6
Medtr8g009020 Medicago truncatula HOM05D000670 ORTHO05D000529 4.6e-09 65.9 209 33.5
arahy.Tifrunner.gnm1.ann1.IGZ079 Arachis hypogaea HOM05D000670 ORTHO05D000529 1.0e-08 64.7 73 52.1
arahy.Tifrunner.gnm1.ann1.V2ZUG7 Arachis hypogaea HOM05D000670 ORTHO05D038901 1.3e-08 64.3 65 56.9
TPR.G38701 Trifolium pratense HOM05D000670 ORTHO05D000529 2.3e-08 63.5 129 38.0
Glyma.07G116700 Glycine max HOM05D000670 ORTHO05D000529 3.0e-08 63.2 152 36.2
Phvul.010G042700 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 3.0e-08 63.2 91 48.4
Psat0s4073g0040 Pisum sativum HOM05D000670 ORTHO05D000529 3.9e-08 62.8 119 41.2
Lalb_Chr14g0373971 Lupinus albus HOM05D000670 ORTHO05D000529 5.0e-08 62.4 76 48.7
VMungo0331G1110 Vigna mungo HOM05D000670 ORTHO05D000529 1.1e-07 61.2 87 48.3
Glyma.15G005100 Glycine max HOM05D000670 ORTHO05D000529 1.5e-07 60.8 131 43.5
Ca_01030_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 1.9e-07 60.5 61 55.7
Glyma.15G005000 Glycine max HOM05D000670 ORTHO05D000529 1.9e-07 60.5 119 41.2
Lalb_Chr22g0350721 Lupinus albus HOM05D000670 ORTHO05D000529 1.9e-07 60.5 60 60.0
Psat4g221920 Pisum sativum HOM05D000670 ORTHO05D000529 2.5e-07 60.1 119 41.2
Ciclev10023770m.g Citrus clementina HOM05D000670 ORTHO05D000529 3.3e-07 59.7 93 38.7
Glyma.07G027100 Glycine max HOM05D000670 ORTHO05D000529 3.3e-07 59.7 157 36.3
VMungo0331G0488 Vigna mungo HOM05D000670 ORTHO05D000529 3.3e-07 59.7 89 42.7
SGA_v2.0_scaffold342G49420 Striga asiatica HOM05D000670 ORTHO05D000529 4.3e-07 59.3 75 42.7
VMungo0331G1794 Vigna mungo HOM05D000670 ORTHO05D000529 5.6e-07 58.9 190 28.9
CAN.G1061.12 Capsicum annuum HOM05D000670 ORTHO05D000529 7.3e-07 58.5 57 52.6
Glyma.08G215600 Glycine max HOM05D000670 ORTHO05D000529 7.3e-07 58.5 141 36.2
Psat2g172960 Pisum sativum HOM05D000670 ORTHO05D000529 7.3e-07 58.5 83 43.4
SGA_v2.0_scaffold32G12962 Striga asiatica HOM05D000670 ORTHO05D000529 7.3e-07 58.5 74 41.9
Ca_24655_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 1.2e-06 57.8 94 42.6
Prupe.6G211900 Prunus persica HOM05D000670 ORTHO05D000529 1.2e-06 57.8 58 53.4
Medtr6g047550 Medicago truncatula HOM05D000670 ORTHO05D000529 1.6e-06 57.4 140 37.9
THA.LOC104807858 Tarenaya hassleriana HOM05D000670 ORTHO05D000529 1.6e-06 57.4 71 43.7
Lj3g0020213 Lotus japonicus HOM05D000670 ORTHO05D000529 2.1e-06 57.0 68 48.5
Medtr8g009010 Medicago truncatula HOM05D000670 ORTHO05D000529 2.1e-06 57.0 127 37.8
Actinidia02421 Actinidia chinensis HOM05D000670 ORTHO05D000529 2.8e-06 56.6 65 49.2
Lj5g0005318 Lotus japonicus HOM05D000670 ORTHO05D000529 2.8e-06 56.6 58 51.7
Manes.13G105700 Manihot esculenta HOM05D000670 ORTHO05D000529 2.8e-06 56.6 58 51.7
Medtr0011s0210 Medicago truncatula HOM05D000670 ORTHO05D000529 2.8e-06 56.6 60 48.3
Medtr0011s0260 Medicago truncatula HOM05D000670 ORTHO05D000529 2.8e-06 56.6 60 48.3
Phvul.002G216700 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 2.8e-06 56.6 76 46.1
Glyma.07G117600 Glycine max HOM05D000670 ORTHO05D000529 3.6e-06 56.2 125 35.2
Medtr7g080780 Medicago truncatula HOM05D000670 ORTHO05D000529 3.6e-06 56.2 150 33.3
Glyma.01G198000 Glycine max HOM05D000670 ORTHO05D000529 4.7e-06 55.8 75 45.3
Glyma.13G368500 Glycine max HOM05D000670 ORTHO05D000529 4.7e-06 55.8 132 40.9
Lalb_Chr15g0090231 Lupinus albus HOM05D000670 ORTHO05D000529 4.7e-06 55.8 76 43.4
Solyc01g106460.4 Solanum lycopersicum HOM05D000670 ORTHO05D000529 4.7e-06 55.8 81 42.0
TPR.G22722 Trifolium pratense HOM05D000670 ORTHO05D000529 4.7e-06 55.8 82 41.5
VMungo1383G0180 Vigna mungo HOM05D000670 ORTHO05D000529 4.7e-06 55.8 151 33.8
arahy.Tifrunner.gnm1.ann1.FH0TD2 Arachis hypogaea HOM05D000670 ORTHO05D000529 6.2e-06 55.5 63 47.6
FAN20G0712 Fragaria x ananassa HOM05D000670 ORTHO05D000529 6.2e-06 55.5 58 48.3
Glyma.07G027300 Glycine max HOM05D000670 ORTHO05D000529 6.2e-06 55.5 98 42.9
Glyma.09G246800 Glycine max HOM05D000670 ORTHO05D000529 6.2e-06 55.5 99 38.4
Lj5P224T39 Lonicera japonica HOM05D000670 ORTHO05D000529 6.2e-06 55.5 63 47.6
MD16G1282500 Malus domestica HOM05D000670 ORTHO05D000529 6.2e-06 55.5 58 50.0
Phvul.010G158600 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 6.2e-06 55.5 137 36.5
Actinidia28011 Actinidia chinensis HOM05D000670 ORTHO05D000529 8.1e-06 55.1 76 43.4
arahy.Tifrunner.gnm1.ann1.4TH67S Arachis hypogaea HOM05D000670 ORTHO05D000529 8.1e-06 55.1 63 47.6
Glyma.03G105700 Glycine max HOM05D000670 ORTHO05D000529 8.1e-06 55.1 126 37.3
Medtr0250s0040 Medicago truncatula HOM05D000670 ORTHO05D000529 8.1e-06 55.1 60 45.0
Peaxi162Scf00299g00345 Petunia axillaris HOM05D000670 ORTHO05D000529 8.1e-06 55.1 82 43.9
Phvul.010G158300 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 8.1e-06 55.1 89 41.6


User provided reference genes

Program Settings