Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 3.6e-158 562.4 514 100.0
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 1.0e-64 251.9 683 46.1
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 7.1e-45 186.0 497 63.8
Ca_10079_v3 Cicer arietinum L. HOM05D004923 ORTHO05D005940 1.2e-44 185.3 678 43.7
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 4.8e-33 146.7 461 53.6
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 5.4e-29 133.3 168 49.4
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 7.9e-28 129.4 168 50.0
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 5.1e-27 126.7 166 48.8
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 8.1e-25 119.4 164 47.0
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 5.3e-24 116.7 170 42.9
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 1.5e-23 115.2 162 46.3
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 3.4e-23 114.0 170 44.1
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 9.9e-23 112.5 169 41.4
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 3.8e-22 110.5 162 45.7
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 4.9e-22 110.2 134 48.5
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 1.9e-21 108.2 170 44.1
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 3.5e-20 104.0 167 41.9
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.3e-19 102.1 170 37.6
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 5.1e-19 100.1 159 44.0
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 1.5e-18 98.6 156 40.4
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.9e-18 98.2 159 43.4
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 2.5e-18 97.8 167 37.7
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.3e-18 97.4 149 46.3
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 5.6e-18 96.7 159 43.4
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 5.6e-18 96.7 169 39.1
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 7.4e-18 96.3 159 44.0
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 7.4e-18 96.3 158 41.1
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 9.6e-18 95.9 166 40.4
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 1.3e-17 95.5 149 43.6
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.6e-17 95.1 169 39.6
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.6e-17 95.1 169 39.6
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.1e-17 94.7 159 42.8
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 2.8e-17 94.4 172 36.6
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 3.7e-17 94.0 162 40.7
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 3.7e-17 94.0 172 36.0
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 3.7e-17 94.0 171 38.6
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 3.7e-17 94.0 171 38.6
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.4e-16 92.0 161 42.2
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 1.8e-16 91.7 172 36.6
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 1.8e-16 91.7 130 43.1
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 9.0e-16 89.4 173 39.3
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 3.4e-15 87.4 128 46.1
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 3.4e-15 87.4 149 36.2
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 4.5e-15 87.0 157 35.0
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 7.6e-15 86.3 165 37.0
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 1.0e-14 85.9 149 36.2
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 1.0e-14 85.9 170 38.2
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 2.2e-14 84.7 169 35.5
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 2.2e-14 84.7 128 39.8
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 8.4e-14 82.8 168 38.7
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 1.4e-13 82.0 145 36.6
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 2.5e-13 81.3 165 35.2
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 3.2e-13 80.9 158 33.5
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 5.5e-13 80.1 145 33.8
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 9.3e-13 79.3 168 36.3
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.6e-12 78.6 155 34.2
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 3.5e-12 77.4 161 33.5
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 4.6e-12 77.0 158 34.8
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 6.0e-12 76.6 161 33.5
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 7.9e-12 76.3 161 34.2
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 1.0e-11 75.9 110 46.4
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 3.0e-11 74.3 76 53.9
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 3.9e-11 73.9 124 34.7
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 3.9e-11 73.9 120 45.8
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 5.1e-11 73.6 161 35.4
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 6.7e-11 73.2 162 32.1
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 6.7e-11 73.2 162 32.1
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 8.7e-11 72.8 158 31.0
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 1.1e-10 72.4 124 35.5
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 1.1e-10 72.4 114 43.9
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 1.1e-10 72.4 134 39.6
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 1.5e-10 72.0 161 30.4
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 1.5e-10 72.0 124 34.7
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 1.5e-10 72.0 110 42.7
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 1.5e-10 72.0 132 38.6
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 1.9e-10 71.6 168 32.7
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 3.3e-10 70.9 124 33.1
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 4.3e-10 70.5 147 33.3
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 5.7e-10 70.1 169 32.5
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 5.7e-10 70.1 117 35.9
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 7.4e-10 69.7 130 37.7
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 7.4e-10 69.7 167 37.1
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 7.4e-10 69.7 161 32.9
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.3e-09 68.9 116 38.8
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 1.6e-09 68.6 161 32.3
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 2.1e-09 68.2 99 44.4
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 3.7e-09 67.4 109 38.5
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 4.8e-09 67.0 158 30.4
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 8.2e-09 66.2 127 35.4
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 1.4e-08 65.5 151 33.8
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 1.8e-08 65.1 120 36.7
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 2.4e-08 64.7 119 42.9
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 3.1e-08 64.3 109 36.7
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 4.1e-08 63.9 137 33.6
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 5.3e-08 63.5 109 40.4
BcaC05g29999 Brassica carinata HOM05D004923 ORTHO05D005940 1.2e-07 62.4 98 37.8
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 1.2e-07 62.4 152 34.2
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 1.2e-07 62.4 121 38.8
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 1.2e-07 62.4 137 34.3
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 2.0e-07 61.6 78 47.4
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 3.4e-07 60.8 171 29.8
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 5.9e-07 60.1 132 35.6
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 5.9e-07 60.1 168 29.2
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 5.9e-07 60.1 122 36.9
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 1.7e-06 58.5 160 33.1
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 2.9e-06 57.8 171 32.7
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 2.9e-06 57.8 101 42.6
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 2.9e-06 57.8 151 33.8
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 2.9e-06 57.8 151 33.8
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 2.9e-06 57.8 176 30.1
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 6.5e-06 56.6 106 37.7


User provided reference genes

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