Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 4.2e-47 191.0 98 100.0
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 1.1e-39 166.4 98 84.7
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 2.1e-38 162.2 98 82.7
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 3.9e-37 157.9 98 80.6
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 2.4e-34 148.7 100 77.0
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 5.9e-33 144.1 98 75.5
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 7.7e-33 143.7 98 75.5
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 1.3e-32 142.9 98 74.5
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 3.2e-31 138.3 98 73.5
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 9.7e-28 126.7 98 67.3
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 4.5e-25 117.9 98 64.3
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 1.0e-24 116.7 101 65.3
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 1.3e-24 116.3 98 65.3
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 2.2e-24 115.5 98 64.3
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 5.0e-24 114.4 101 64.4
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 5.0e-24 114.4 98 63.3
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 5.0e-24 114.4 98 63.3
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 8.5e-24 113.6 98 63.3
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 1.1e-23 113.2 98 61.2
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.1e-23 113.2 98 63.3
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 1.9e-23 112.5 78 71.8
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 5.5e-23 110.9 98 62.2
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 9.4e-23 110.2 98 64.3
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 1.6e-22 109.4 77 71.4
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 3.6e-22 108.2 77 71.4
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.6e-22 108.2 98 61.2
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 3.6e-22 108.2 77 70.1
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 4.7e-22 107.8 98 61.2
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 6.1e-22 107.5 98 60.2
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 6.1e-22 107.5 81 65.4
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 8.0e-22 107.1 73 72.6
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 8.0e-22 107.1 91 63.7
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 8.0e-22 107.1 80 66.2
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 1.0e-21 106.7 80 65.0
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 1.8e-21 105.9 77 70.1
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 1.8e-21 105.9 98 59.2
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 2.3e-21 105.5 92 60.9
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 3.0e-21 105.1 77 66.2
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.2e-21 104.4 76 68.4
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 6.7e-21 104.0 80 65.0
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 6.7e-21 104.0 79 63.3
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 1.1e-20 103.2 77 67.5
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 1.1e-20 103.2 98 55.1
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 1.5e-20 102.8 80 63.8
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.5e-20 102.8 80 63.8
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 1.5e-20 102.8 98 53.1
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 1.5e-20 102.8 91 59.3
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 2.6e-20 102.1 77 66.2
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.6e-20 102.1 72 69.4
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 2.6e-20 102.1 77 66.2
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 2.6e-20 102.1 94 59.6
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 3.3e-20 101.7 98 55.1
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 4.4e-20 101.3 78 67.9
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 4.4e-20 101.3 94 58.5
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 4.4e-20 101.3 92 57.6
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 5.7e-20 100.9 77 70.1
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 7.4e-20 100.5 87 63.2
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 7.4e-20 100.5 94 58.5
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 9.7e-20 100.1 73 68.5
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 9.7e-20 100.1 99 56.6
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 1.3e-19 99.8 99 55.6
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 1.3e-19 99.8 80 62.5
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 2.2e-19 99.0 79 62.0
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 2.2e-19 99.0 79 62.0
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 2.2e-19 99.0 79 62.0
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.8e-19 98.6 78 64.1
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.8e-19 98.6 78 64.1
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 3.7e-19 98.2 88 58.0
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 6.3e-19 97.4 87 62.1
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 2.4e-18 95.5 77 62.3
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 4.1e-18 94.7 90 56.7
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.1e-18 94.7 70 67.1
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 5.3e-18 94.4 73 63.0
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 7.0e-18 94.0 79 64.6
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 7.0e-18 94.0 76 61.8
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 2.0e-17 92.4 98 53.1
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 5.9e-17 90.9 87 54.0
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 7.7e-17 90.5 98 45.9
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 7.7e-17 90.5 98 53.1
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.0e-16 90.1 81 58.0
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.0e-16 90.1 81 58.0
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.0e-16 90.1 81 58.0
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 1.7e-16 89.4 76 61.8
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 2.2e-16 89.0 98 50.0
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 5.0e-16 87.8 77 58.4
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 5.0e-16 87.8 77 58.4
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 5.0e-16 87.8 76 57.9
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 2.5e-15 85.5 98 50.0
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 2.5e-15 85.5 99 50.5
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 4.2e-15 84.7 99 50.5
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 4.2e-15 84.7 81 53.1
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 9.4e-15 83.6 90 52.2
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 9.4e-15 83.6 98 49.0
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 4.7e-14 81.3 51 72.5
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 4.7e-14 81.3 62 64.5
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 4.7e-14 81.3 73 58.9
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 6.1e-14 80.9 76 52.6
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 3.4e-12 75.1 75 50.7
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 3.4e-12 75.1 85 49.4
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 5.7e-12 74.3 80 50.0
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 5.7e-12 74.3 80 50.0
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 2.8e-11 72.0 92 46.7
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 4.1e-10 68.2 100 43.0
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 3.5e-09 65.1 73 50.7
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 5.9e-09 64.3 36 80.6
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 3.8e-08 61.6 97 42.3
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 1.2e-06 56.6 66 42.4


User provided reference genes

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