Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27364 Trifolium pratense HOM05D000761 ORTHO05D001062 6.3e-18 92.8 40 100.0
TPR.G30160 Trifolium pratense HOM05D000761 ORTHO05D001062 1.2e-16 88.6 39 94.9
Ca_15148_v3 Cicer arietinum L. HOM05D000761 ORTHO05D001062 8.6e-15 82.4 39 89.7
Medtr3g071480 Medicago truncatula HOM05D000761 ORTHO05D001062 1.1e-14 82.0 38 89.5
Glyma.11G232200 Glycine max HOM05D000761 ORTHO05D001062 2.8e-13 77.4 39 82.1
Glyma.18G025100 Glycine max HOM05D000761 ORTHO05D001062 6.1e-13 76.3 39 79.5
Glyma.14G057400 Glycine max HOM05D000761 ORTHO05D001062 2.3e-12 74.3 38 81.6
Lj6g0009042 Lotus japonicus HOM05D000761 ORTHO05D001062 8.9e-12 72.4 39 76.9
Lalb_Chr11g0075061 Lupinus albus HOM05D000761 ORTHO05D001062 8.9e-12 72.4 39 79.5
Lalb_Chr23g0277051 Lupinus albus HOM05D000761 ORTHO05D001062 1.2e-11 72.0 39 79.5
Glyma.02G263900 Glycine max HOM05D000761 ORTHO05D001062 1.5e-11 71.6 38 76.3
Lalb_Chr08g0231551 Lupinus albus HOM05D000761 ORTHO05D001062 1.5e-11 71.6 39 76.9
VMungo1383G1153 Vigna mungo HOM05D000761 ORTHO05D001062 2.0e-11 71.2 39 76.9
arahy.Tifrunner.gnm1.ann1.CWU154 Arachis hypogaea HOM05D000761 ORTHO05D001062 5.7e-11 69.7 39 71.8
arahy.Tifrunner.gnm1.ann1.ETT26Z Arachis hypogaea HOM05D000761 ORTHO05D001062 5.7e-11 69.7 39 71.8
Phvul.001G245300 Phaseolus vulgaris HOM05D000761 ORTHO05D001062 5.7e-11 69.7 39 74.4
Phvul.008G221900 Phaseolus vulgaris HOM05D000761 ORTHO05D001062 5.7e-11 69.7 38 76.3
VMungo0647G0425 Vigna mungo HOM05D000761 ORTHO05D001062 5.7e-11 69.7 38 73.7
Ca_05981_v3 Cicer arietinum L. HOM05D000761 ORTHO05D001062 1.7e-10 68.2 38 73.7
Medtr1g084790 Medicago truncatula HOM05D000761 ORTHO05D001062 1.7e-10 68.2 38 71.1
arahy.Tifrunner.gnm1.ann1.F33GX9 Arachis hypogaea HOM05D000761 ORTHO05D001062 2.9e-10 67.4 39 71.8
arahy.Tifrunner.gnm1.ann1.YNK9KY Arachis hypogaea HOM05D000761 ORTHO05D001062 2.9e-10 67.4 39 71.8
TPR.G38384 Trifolium pratense HOM05D000761 ORTHO05D001062 2.9e-10 67.4 38 73.7
LjContig00357g0001724 Lotus japonicus HOM05D000761 ORTHO05D001062 4.9e-10 66.6 38 68.4
Psat2g030800 Pisum sativum HOM05D000761 ORTHO05D001062 1.1e-09 65.5 37 70.3
CiPaw.02G195000 Carya illinoinensis HOM05D000761 ORTHO05D001062 5.4e-09 63.2 38 63.2
Psat5g131240 Pisum sativum HOM05D000761 ORTHO05D001062 5.4e-09 63.2 33 81.8
Haze_17262 Corylus avellana HOM05D000761 ORTHO05D001062 9.2e-09 62.4 38 60.5
Prupe.2G254500 Prunus persica HOM05D000761 ORTHO05D001062 9.2e-09 62.4 38 63.2
RcHm_v2.0_Chr1g0370831 Rosa chinensis HOM05D000761 ORTHO05D001062 9.2e-09 62.4 38 60.5
Gohir.D02G144433 Gossypium hirsutum HOM05D000761 ORTHO05D001062 1.2e-08 62.0 38 63.2
Eucgr.B02229 Eucalyptus grandis HOM05D000761 ORTHO05D001062 1.6e-08 61.6 38 63.2
Gohir.D08G219400 Gossypium hirsutum HOM05D000761 ORTHO05D001062 1.6e-08 61.6 38 63.2
Gohir.D11G179700 Gossypium hirsutum HOM05D000761 ORTHO05D001062 1.6e-08 61.6 38 63.2
Gohir.D12G024900 Gossypium hirsutum HOM05D000761 ORTHO05D001062 1.6e-08 61.6 38 63.2
Gorai.004G233500 Gossypium raimondii HOM05D000761 ORTHO05D001062 1.6e-08 61.6 38 63.2
Gorai.005G161700 Gossypium raimondii HOM05D000761 ORTHO05D001062 1.6e-08 61.6 38 63.2
Manes.05G014704 Manihot esculenta HOM05D000761 ORTHO05D022902 2.0e-08 61.2 38 63.2
Manes.11G152091 Manihot esculenta HOM05D000761 ORTHO05D001062 2.0e-08 61.2 38 63.2
Manes.11G152148 Manihot esculenta HOM05D000761 ORTHO05D022902 2.0e-08 61.2 38 63.2
Manes.11G152172 Manihot esculenta HOM05D000761 ORTHO05D022902 2.0e-08 61.2 38 63.2
Manes.11G152182 Manihot esculenta HOM05D000761 ORTHO05D022902 2.0e-08 61.2 38 63.2
Nn2g10955 Nelumbo nucifera HOM05D000761 ORTHO05D001062 2.0e-08 61.2 38 63.2
Manes.07G132800 Manihot esculenta HOM05D000761 ORTHO05D001062 2.7e-08 60.8 38 60.5
Gohir.A08G202500 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.5e-08 60.5 38 60.5
MD01G1156900 Malus domestica HOM05D000761 ORTHO05D001062 3.5e-08 60.5 38 60.5
Cpa.g.sc19.143 Carica papaya HOM05D000761 ORTHO05D001062 4.6e-08 60.1 38 60.5
FAN03G2092 Fragaria x ananassa HOM05D000761 ORTHO05D001062 4.6e-08 60.1 38 60.5
FAN10G1767 Fragaria x ananassa HOM05D000761 ORTHO05D001062 4.6e-08 60.1 38 60.5
Lj1A959T87 Lonicera japonica HOM05D000761 ORTHO05D001062 5.9e-08 59.7 38 60.5
Nn2g13223 Nelumbo nucifera HOM05D000761 ORTHO05D001062 5.9e-08 59.7 38 63.2
QL01p039620 Quercus lobata HOM05D000761 ORTHO05D001062 5.9e-08 59.7 38 60.5
FvH4_7g24950 Fragaria vesca HOM05D000761 ORTHO05D001062 1.3e-07 58.5 38 60.5
FAN01G0612 Fragaria x ananassa HOM05D000761 ORTHO05D001062 1.3e-07 58.5 38 60.5
FAN06G4811 Fragaria x ananassa HOM05D000761 ORTHO05D001062 1.3e-07 58.5 38 60.5
Manes.10G009600 Manihot esculenta HOM05D000761 ORTHO05D001062 1.7e-07 58.2 38 63.2
Duzib170G0959 Durio zibethinus HOM05D000761 ORTHO05D001062 2.3e-07 57.8 38 55.3
Hma1.2p1_0146F.1_g065510 Hydrangea macrophylla HOM05D000761 ORTHO05D001062 2.3e-07 57.8 38 57.9
Manes.18G136200 Manihot esculenta HOM05D000761 ORTHO05D001062 2.3e-07 57.8 38 57.9
TWI31G0256 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 2.3e-07 57.8 38 52.6
TAR623G0384 Trochodendron aralioides HOM05D000761 ORTHO05D001062 2.3e-07 57.8 38 55.3
Duzib168G2162 Durio zibethinus HOM05D000761 ORTHO05D001062 3.0e-07 57.4 38 55.3
Eucgr.G03081 Eucalyptus grandis HOM05D000761 ORTHO05D001062 3.0e-07 57.4 38 55.3
Gorai.005G088200 Gossypium raimondii HOM05D000761 ORTHO05D001062 3.0e-07 57.4 38 60.5
Rhsim03G0145900 Rhododendron simsii HOM05D000761 ORTHO05D001062 3.0e-07 57.4 38 60.5
CDE04G0780 Ceratophyllum demersum HOM05D000761 ORTHO05D001062 3.9e-07 57.0 38 57.9
AUR62009699 Chenopodium quinoa HOM05D000761 ORTHO05D001062 3.9e-07 57.0 38 57.9
Gohir.D05G108300 Gossypium hirsutum HOM05D000761 ORTHO05D001062 3.9e-07 57.0 38 52.6
Gorai.009G112500 Gossypium raimondii HOM05D000761 ORTHO05D001062 3.9e-07 57.0 38 52.6
GSVIVG01032772001 Vitis vinifera HOM05D000761 ORTHO05D001062 3.9e-07 57.0 38 60.5
Sabra09G0057300 Salix brachista HOM05D000761 ORTHO05D001062 5.0e-07 56.6 38 52.6
Sabra16G0173700 Salix brachista HOM05D000761 ORTHO05D001062 5.0e-07 56.6 38 52.6
TWI09G1449 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 5.0e-07 56.6 38 60.5
Cc02_g06120 Coffea canephora HOM05D000761 ORTHO05D001062 6.6e-07 56.2 38 55.3
Potri.001G280200 Populus trichocarpa HOM05D000761 ORTHO05D001062 6.6e-07 56.2 38 52.6
Potri.009G075400 Populus trichocarpa HOM05D000761 ORTHO05D001062 6.6e-07 56.2 38 50.0
RcHm_v2.0_Chr4g0424991 Rosa chinensis HOM05D000761 ORTHO05D001062 6.6e-07 56.2 36 55.6
CSS0014908 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 8.6e-07 55.8 38 55.3
CSS0038507 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 8.6e-07 55.8 38 55.3
MELO3C018371.2 Cucumis melo HOM05D000761 ORTHO05D001062 8.6e-07 55.8 37 56.8
Thecc.09G354000 Theobroma cacao HOM05D000761 ORTHO05D001062 8.6e-07 55.8 38 52.6
GSVIVG01024683001 Vitis vinifera HOM05D000761 ORTHO05D001062 1.1e-06 55.5 38 57.9
CiPaw.01G300800 Carya illinoinensis HOM05D000761 ORTHO05D001062 1.5e-06 55.1 38 52.6
Migut.F00653 Erythranthe guttata HOM05D000761 ORTHO05D001062 1.5e-06 55.1 39 64.1
Hma1.2p1_0841F.1_g226780 Hydrangea macrophylla HOM05D000761 ORTHO05D001062 1.5e-06 55.1 39 56.4
TAR369G0128 Trochodendron aralioides HOM05D000761 ORTHO05D001062 1.5e-06 55.1 38 52.6
TAR633G2782 Trochodendron aralioides HOM05D000761 ORTHO05D001062 1.5e-06 55.1 38 55.3
CsaV3_5G010350 Cucumis sativus L. HOM05D000761 ORTHO05D001062 1.9e-06 54.7 37 54.1
CSS0017628 Camellia sinensis var. sinensis HOM05D000761 ORTHO05D001062 2.5e-06 54.3 40 60.0
CDE06G0913 Ceratophyllum demersum HOM05D000761 ORTHO05D001062 2.5e-06 54.3 38 55.3
ClCG02G019380 Citrullus lanatus HOM05D000761 ORTHO05D001062 2.5e-06 54.3 38 55.3
Potri.008G072100 Populus trichocarpa HOM05D000761 ORTHO05D001062 2.5e-06 54.3 38 55.3
Sabra08G0053300 Salix brachista HOM05D000761 ORTHO05D001062 2.5e-06 54.3 38 55.3
TWI73G0012 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 2.5e-06 54.3 38 55.3
Cc01_g14620 Coffea canephora HOM05D000761 ORTHO05D001062 3.3e-06 53.9 38 52.6
Hund05041 Selenicereus undatus HOM05D000761 ORTHO05D001062 3.3e-06 53.9 38 55.3
Duzib106G0150 Durio zibethinus HOM05D000761 ORTHO05D001062 4.3e-06 53.5 38 50.0
Prupe.6G052400 Prunus persica HOM05D000761 ORTHO05D001062 4.3e-06 53.5 38 55.3
Hund15894 Selenicereus undatus HOM05D000761 ORTHO05D001062 4.3e-06 53.5 38 50.0
EL10Ac7g15888 Beta vulgaris HOM05D000761 ORTHO05D001062 5.6e-06 53.1 38 44.7
Duzib128G0627 Durio zibethinus HOM05D000761 ORTHO05D001062 5.6e-06 53.1 38 50.0
Sed0027985 Sechium edule HOM05D000761 ORTHO05D001062 5.6e-06 53.1 37 54.1
Lj6g0011027 Lotus japonicus HOM05D000761 ORTHO05D001062 7.3e-06 52.8 38 50.0
Sed0021224 Sechium edule HOM05D000761 ORTHO05D001062 7.3e-06 52.8 37 51.4
Hund13886 Selenicereus undatus HOM05D000761 ORTHO05D001062 7.3e-06 52.8 37 51.4
CiPaw.13G073000 Carya illinoinensis HOM05D000761 ORTHO05D001062 9.5e-06 52.4 38 52.6
SGA_v2.0_scaffold60G20970 Striga asiatica HOM05D000761 ORTHO05D001062 9.5e-06 52.4 38 60.5


User provided reference genes

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