Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27262 Trifolium pratense HOM05D001728 ORTHO05D004174 4.4e-84 314.7 166 100.0
VMungo0540G0586 Vigna mungo HOM05D001728 ORTHO05D004174 1.7e-43 179.9 129 75.2
Lj6g0011500 Lotus japonicus HOM05D001728 ORTHO05D004174 2.9e-43 179.1 132 76.5
Glyma.15G141200 Glycine max HOM05D001728 ORTHO05D004174 3.8e-43 178.7 130 76.9
arahy.Tifrunner.gnm1.ann1.2RYD9Q Arachis hypogaea HOM05D001728 ORTHO05D004174 6.5e-43 177.9 133 73.7
Phvul.006G117400 Phaseolus vulgaris HOM05D001728 ORTHO05D004174 3.2e-42 175.6 129 74.4
arahy.Tifrunner.gnm1.ann1.C412JQ Arachis hypogaea HOM05D001728 ORTHO05D004174 1.2e-41 173.7 133 72.9
arahy.Tifrunner.gnm1.ann1.MYV2K5 Arachis hypogaea HOM05D001728 ORTHO05D004174 1.0e-40 170.6 130 73.8
arahy.Tifrunner.gnm1.ann1.6P8AS9 Arachis hypogaea HOM05D001728 ORTHO05D004174 3.0e-40 169.1 118 78.0
Glyma.09G036300 Glycine max HOM05D001728 ORTHO05D004174 3.0e-40 169.1 131 73.3
Lj4g0019830 Lotus japonicus HOM05D001728 ORTHO05D004174 1.5e-39 166.8 131 71.0
Lalb_Chr15g0089241 Lupinus albus HOM05D001728 ORTHO05D004174 8.2e-38 161.0 129 67.4
Glyma.17G032800 Glycine max HOM05D001728 ORTHO05D004174 1.4e-37 160.2 133 68.4
TPR.G16843 Trifolium pratense HOM05D001728 ORTHO05D004174 4.1e-37 158.7 131 70.2
Lalb_Chr18g0058741 Lupinus albus HOM05D001728 ORTHO05D004174 9.1e-37 157.5 130 69.2
Phvul.003G113800 Phaseolus vulgaris HOM05D001728 ORTHO05D004174 1.2e-36 157.1 123 67.5
Glyma.07G240600 Glycine max HOM05D001728 ORTHO05D004174 1.5e-36 156.8 131 65.6
Ca_21446_v3 Cicer arietinum L. HOM05D001728 ORTHO05D004174 3.4e-36 155.6 144 64.6
Psat4g024160 Pisum sativum HOM05D001728 ORTHO05D004174 3.4e-36 155.6 112 74.1
Medtr4g121960 Medicago truncatula HOM05D001728 ORTHO05D004174 4.5e-36 155.2 131 71.0
Thecc.04G299100 Theobroma cacao HOM05D001728 ORTHO05D004174 2.2e-35 152.9 129 65.9
VMungo1215G0747 Vigna mungo HOM05D001728 ORTHO05D004174 2.2e-35 152.9 123 69.1
Dinv15187 Davidia involucrata HOM05D001728 ORTHO05D004174 3.8e-35 152.1 129 65.1
Cfa015326 Carpinus fangiana HOM05D001728 ORTHO05D004174 4.2e-34 148.7 129 63.6
GSVIVG01035008001 Vitis vinifera HOM05D001728 ORTHO05D004174 7.2e-34 147.9 127 63.8
Duzib151G0474 Durio zibethinus HOM05D001728 ORTHO05D004174 1.2e-33 147.1 129 64.3
Potri.008G106300 Populus trichocarpa HOM05D001728 ORTHO05D004174 2.1e-33 146.4 140 61.4
Duzib052G1178 Durio zibethinus HOM05D001728 ORTHO05D004174 3.6e-33 145.6 128 63.3
Hma1.2p1_0013F.1_g008660 Hydrangea macrophylla HOM05D001728 ORTHO05D004174 3.6e-33 145.6 130 63.8
CSS0020178 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 1.0e-32 144.1 129 64.3
Ciclev10005518m.g Citrus clementina HOM05D001728 ORTHO05D004174 1.0e-32 144.1 125 66.4
Haze_01289 Corylus avellana HOM05D001728 ORTHO05D004174 1.4e-32 143.7 132 64.4
Sabra08G0080000 Salix brachista HOM05D001728 ORTHO05D004174 3.0e-32 142.5 140 59.3
RcHm_v2.0_Chr4g0424811 Rosa chinensis HOM05D001728 ORTHO05D004174 5.1e-32 141.7 128 62.5
FAN07G1735 Fragaria x ananassa HOM05D001728 ORTHO05D004174 6.7e-32 141.4 128 62.5
MD13G1155700 Malus domestica HOM05D001728 ORTHO05D004174 6.7e-32 141.4 134 60.4
CsaV3_3G015120 Cucumis sativus L. HOM05D001728 ORTHO05D004174 8.8e-32 141.0 141 60.3
Dinv44292 Davidia involucrata HOM05D001728 ORTHO05D004174 1.1e-31 140.6 124 61.3
Gohir.D10G178500 Gossypium hirsutum HOM05D001728 ORTHO05D004174 1.1e-31 140.6 129 59.7
Gorai.011G199600 Gossypium raimondii HOM05D001728 ORTHO05D004174 1.1e-31 140.6 129 59.7
Atru.chr4.3016 Acer truncatum HOM05D001728 ORTHO05D004174 1.5e-31 140.2 128 60.2
Actinidia13363 Actinidia chinensis HOM05D001728 ORTHO05D004174 1.5e-31 140.2 125 60.8
DCAR_030467 Daucus carota HOM05D001728 ORTHO05D004174 2.6e-31 139.4 124 62.1
DCAR_030475 Daucus carota HOM05D001728 ORTHO05D004174 2.6e-31 139.4 124 62.1
MBI19_g07231_MAGBIO Magnolia biondii HOM05D001728 ORTHO05D004174 2.6e-31 139.4 136 60.3
Manes.03G203400 Manihot esculenta HOM05D001728 ORTHO05D004174 2.6e-31 139.4 139 58.3
Cpa.g.sc9.71 Carica papaya HOM05D001728 ORTHO05D004174 3.3e-31 139.0 122 66.4
QL06p011803 Quercus lobata HOM05D001728 ORTHO05D004174 3.3e-31 139.0 135 60.7
Rhsim02G0004600 Rhododendron simsii HOM05D001728 ORTHO05D004174 3.3e-31 139.0 123 63.4
Gohir.A10G171400 Gossypium hirsutum HOM05D001728 ORTHO05D004174 4.4e-31 138.7 125 60.8
Potri.010G143900 Populus trichocarpa HOM05D001728 ORTHO05D004174 4.4e-31 138.7 135 58.5
TAR362G0220 Trochodendron aralioides HOM05D001728 ORTHO05D004174 7.4e-31 137.9 135 59.3
MELO3C006710.2 Cucumis melo HOM05D001728 ORTHO05D004174 9.7e-31 137.5 117 67.5
Nn3g21703 Nelumbo nucifera HOM05D001728 ORTHO05D004174 1.3e-30 137.1 138 59.4
Sabra10G0111100 Salix brachista HOM05D001728 ORTHO05D004174 1.3e-30 137.1 133 58.6
Sed0009760 Sechium edule HOM05D001728 ORTHO05D004174 1.3e-30 137.1 116 67.2
Sed0012381 Sechium edule HOM05D001728 ORTHO05D004174 1.3e-30 137.1 136 56.6
CSS0047464 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 2.8e-30 136.0 126 63.5
FvH4_4g19560 Fragaria vesca HOM05D001728 ORTHO05D004174 2.8e-30 136.0 125 61.6
FAN12G2115 Fragaria x ananassa HOM05D001728 ORTHO05D004174 2.8e-30 136.0 125 61.6
ClCG05G006510 Citrullus lanatus HOM05D001728 ORTHO05D004174 3.7e-30 135.6 117 65.0
MD16G1155400 Malus domestica HOM05D001728 ORTHO05D004174 3.7e-30 135.6 130 60.0
Prupe.1G119000 Prunus persica HOM05D001728 ORTHO05D004174 3.7e-30 135.6 129 60.5
TWI53G1778 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 3.7e-30 135.6 137 59.1
vmacro15187 Vaccinium macrocarpon HOM05D001728 ORTHO05D004174 4.8e-30 135.2 123 64.2
AUR62016122 Chenopodium quinoa HOM05D001728 ORTHO05D004174 8.2e-30 134.4 125 63.2
Manes.15G005200 Manihot esculenta HOM05D001728 ORTHO05D004174 8.2e-30 134.4 132 59.1
Lj6C689T11 Lonicera japonica HOM05D001728 ORTHO05D004174 1.1e-29 134.0 121 62.0
PGR004G2896 Punica granatum HOM05D001728 ORTHO05D004174 1.1e-29 134.0 121 62.8
AUR62041394 Chenopodium quinoa HOM05D001728 ORTHO05D004174 1.4e-29 133.7 122 63.9
DCAR_027001 Daucus carota HOM05D001728 ORTHO05D004174 1.4e-29 133.7 132 57.6
CSS0014848 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004174 3.1e-29 132.5 126 62.7
CANSAT78G2180 Cannabis sativa HOM05D001728 ORTHO05D004174 5.3e-29 131.7 138 58.0
TWI73G0756 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 5.3e-29 131.7 123 63.4
PSO170G6117 Papaver somniferum HOM05D001728 ORTHO05D004174 9.1e-29 131.0 139 54.0
Sc19g0003160 Simmondsia chinensis HOM05D001728 ORTHO05D004174 9.1e-29 131.0 122 63.1
TWI09G0044 Tripterygium wilfordii HOM05D001728 ORTHO05D004174 9.1e-29 131.0 134 59.0
Gohir.D09G235700 Gossypium hirsutum HOM05D001728 ORTHO05D004174 1.5e-28 130.2 128 56.2
Gorai.006G258700 Gossypium raimondii HOM05D001728 ORTHO05D004174 1.5e-28 130.2 128 56.2
Solyc12g099310.2 Solanum lycopersicum HOM05D001728 ORTHO05D004174 1.5e-28 130.2 128 57.0
Sopen12g033990 Solanum pennellii HOM05D001728 ORTHO05D004174 1.5e-28 130.2 127 57.5
CiPaw.02G075700 Carya illinoinensis HOM05D001728 ORTHO05D004174 2.6e-28 129.4 134 58.2
Cc03_g00930 Coffea canephora HOM05D001728 ORTHO05D004174 2.6e-28 129.4 127 60.6
Peaxi162Scf00017g00816 Petunia axillaris HOM05D001728 ORTHO05D004174 2.6e-28 129.4 127 58.3
HanXRQChr05g0148261 Helianthus annuus HOM05D001728 ORTHO05D004174 3.5e-28 129.0 77 81.8
Nitab4.5_0002150g0220 Nicotiana tabacum HOM05D001728 ORTHO05D004174 3.5e-28 129.0 124 58.1
Nitab4.5_0013613g0010 Nicotiana tabacum HOM05D001728 ORTHO05D004174 3.5e-28 129.0 125 58.4
PSO357G0012 Papaver somniferum HOM05D001728 ORTHO05D004174 4.5e-28 128.6 139 53.2
PSO761G0142 Papaver somniferum HOM05D001728 ORTHO05D004174 4.5e-28 128.6 135 54.1
Hund03118 Selenicereus undatus HOM05D001728 ORTHO05D004174 7.7e-28 127.9 122 59.8
MSTRG.10147 Avicennia marina HOM05D001728 ORTHO05D004174 1.0e-27 127.5 129 58.1
EL10Ac3g05476 Beta vulgaris HOM05D001728 ORTHO05D004174 1.0e-27 127.5 132 59.1
CDE02G0105 Ceratophyllum demersum HOM05D001728 ORTHO05D004174 1.0e-27 127.5 131 54.2
Lj3A830T25 Lonicera japonica HOM05D001728 ORTHO05D004174 1.0e-27 127.5 124 60.5
PSO210G3088 Papaver somniferum HOM05D001728 ORTHO05D004174 1.3e-27 127.1 135 54.1
Hund11964 Selenicereus undatus HOM05D001728 ORTHO05D004174 1.3e-27 127.1 124 60.5
Aqoxy2G02747 Aquilegia oxysepala HOM05D001728 ORTHO05D004174 1.7e-27 126.7 134 56.0
MSTRG.24818 Avicennia marina HOM05D001728 ORTHO05D004174 1.7e-27 126.7 131 57.3
ECA246G2493 Erigeron canadensis HOM05D001728 ORTHO05D004174 1.7e-27 126.7 131 58.0
Lsat_1_v5_gn_6_116240 Lactuca sativa HOM05D001728 ORTHO05D004174 1.7e-27 126.7 84 75.0
COL.COLO4_34632 Corchorus olitorius HOM05D001728 ORTHO05D004174 2.2e-27 126.3 137 54.0
CiPaw.01G139100 Carya illinoinensis HOM05D001728 ORTHO05D004174 2.9e-27 125.9 126 58.7
Nn3g19516 Nelumbo nucifera HOM05D001728 ORTHO05D004174 5.0e-27 125.2 71 84.5
Eucgr.A00356 Eucalyptus grandis HOM05D001728 ORTHO05D004174 6.5e-27 124.8 128 57.0
Oeu046575.1 Olea europaea HOM05D001728 ORTHO05D004174 6.5e-27 124.8 117 64.1
Lsat_1_v5_gn_1_41000 Lactuca sativa HOM05D001728 ORTHO05D004174 8.5e-27 124.4 98 67.3
AT3G17000 Arabidopsis thaliana HOM05D001728 ORTHO05D004174 1.9e-26 123.2 128 56.2
CAN.G484.58 Capsicum annuum HOM05D001728 ORTHO05D004174 1.9e-26 123.2 69 85.5
PGR031G3596 Punica granatum HOM05D001728 ORTHO05D004174 1.9e-26 123.2 116 59.5
THA.LOC104818887 Tarenaya hassleriana HOM05D001728 ORTHO05D004174 2.5e-26 122.9 121 59.5
SalBow5G2437 Salvia bowleyana HOM05D001728 ORTHO05D004174 3.2e-26 122.5 115 63.5
Dinv33122 Davidia involucrata HOM05D001728 ORTHO05D004174 4.2e-26 122.1 128 57.0
ATR0796G190 Amborella trichopoda HOM05D001728 ORTHO05D004174 5.5e-26 121.7 145 54.5
PGSC0003DMG400004699 Solanum tuberosum HOM05D001728 ORTHO05D004174 5.5e-26 121.7 116 59.5
AL3G29980 Arabidopsis lyrata HOM05D001728 ORTHO05D004174 7.2e-26 121.3 128 54.7
Zm00001eb014740 Zea mays HOM05D001728 ORTHO05D004174 7.2e-26 121.3 83 75.9
Ah.13g071940 Amaranthus hybridus HOM05D001728 ORTHO05D004174 9.4e-26 120.9 123 61.0
Thhalv10021196m.g Eutrema salsugineum HOM05D001728 ORTHO05D004174 9.4e-26 120.9 129 56.6
Mapoly0002s0227 Marchantia polymorpha HOM05D001728 ORTHO05D004174 1.2e-25 120.6 138 52.2
SalBow2G0520 Salvia bowleyana HOM05D001728 ORTHO05D004174 1.2e-25 120.6 122 58.2
CARHR092250 Cardamine hirsuta HOM05D001728 ORTHO05D004174 1.6e-25 120.2 131 55.0
Oeu019973.1 Olea europaea HOM05D001728 ORTHO05D004174 1.6e-25 120.2 101 67.3
Gohir.A09G234900 Gossypium hirsutum HOM05D001728 ORTHO05D004174 2.1e-25 119.8 116 56.0
Hma1.2p1_0078F.1_g039990 Hydrangea macrophylla HOM05D001728 ORTHO05D004174 2.1e-25 119.8 131 53.4
Oeu003758.1 Olea europaea HOM05D001728 ORTHO05D004174 2.1e-25 119.8 93 68.8
Oeu032018.1 Olea europaea HOM05D001728 ORTHO05D004174 2.1e-25 119.8 126 59.5
SGA_v2.0_scaffold18G08401 Striga asiatica HOM05D001728 ORTHO05D004174 3.6e-25 119.0 124 58.9
Nn8g41281 Nelumbo nucifera HOM05D001728 ORTHO05D004174 4.7e-25 118.6 89 68.5
MSTRG.21773 Avicennia marina HOM05D001728 ORTHO05D004174 6.1e-25 118.2 134 53.0
Sp3g15220 Schrenkiella parvula HOM05D001728 ORTHO05D004174 6.1e-25 118.2 128 53.9
Actinidia14261 Actinidia chinensis HOM05D001728 ORTHO05D004174 1.0e-24 117.5 113 57.5
THA.LOC104820301 Tarenaya hassleriana HOM05D001728 ORTHO05D004174 1.4e-24 117.1 124 58.9
Nn2g12682 Nelumbo nucifera HOM05D001728 ORTHO05D004174 1.8e-24 116.7 94 66.0
Os03g0308000 Oryza sativa ssp. japonica HOM05D001728 ORTHO05D004174 4.0e-24 115.5 78 74.4
Aa31LG8G4040 Aethionema arabicum HOM05D001728 ORTHO05D004174 5.2e-24 115.2 136 52.2
Carub.0003s1675 Capsella rubella HOM05D001728 ORTHO05D004174 5.2e-24 115.2 127 53.5
A01p21340 Brassica napus HOM05D001728 ORTHO05D004174 8.8e-24 114.4 136 50.0
C01p26690 Brassica napus HOM05D001728 ORTHO05D004174 8.8e-24 114.4 126 50.8
BraA01t02040Z Brassica rapa HOM05D001728 ORTHO05D004174 8.8e-24 114.4 136 50.0
HPP92_008952 Vanilla planifolia HOM05D001728 ORTHO05D004174 8.8e-24 114.4 132 51.5
AL7G38800 Arabidopsis lyrata HOM05D001728 ORTHO05D004174 1.1e-23 114.0 127 49.6
A01p37320 Brassica napus HOM05D001728 ORTHO05D004174 1.1e-23 114.0 128 53.1
BraA01t03790Z Brassica rapa HOM05D001728 ORTHO05D004174 1.1e-23 114.0 128 53.1
CDE08G1047 Ceratophyllum demersum HOM05D001728 ORTHO05D004174 1.1e-23 114.0 137 52.6
C01p47260 Brassica napus HOM05D001728 ORTHO05D004174 2.0e-23 113.2 131 52.7
Peaxi162Scf00228g00218 Petunia axillaris HOM05D001728 ORTHO05D004174 2.6e-23 112.8 137 52.6
BcaC09g48652 Brassica carinata HOM05D001728 ORTHO05D004174 3.3e-23 112.5 132 52.3
BcaNung00213 Brassica carinata HOM05D001728 ORTHO05D004174 3.3e-23 112.5 128 51.6
BcaC09g50319 Brassica carinata HOM05D001728 ORTHO05D004174 4.4e-23 112.1 126 50.8
unitig_22.g6343 Utricularia gibba HOM05D001728 ORTHO05D004174 4.4e-23 112.1 100 64.0
Thhalv10025677m.g Eutrema salsugineum HOM05D001728 ORTHO05D004174 5.7e-23 111.7 140 48.6
BolC1t04696H Brassica oleracea HOM05D001728 ORTHO05D004174 7.5e-23 111.3 131 51.9
Zm00001eb396060 Zea mays HOM05D001728 ORTHO05D004174 7.5e-23 111.3 144 50.0
Nn2g11990 Nelumbo nucifera HOM05D001728 ORTHO05D004174 9.7e-23 110.9 102 62.7
Sp7g14760 Schrenkiella parvula HOM05D001728 ORTHO05D004174 9.7e-23 110.9 128 50.8
BolC1t02610H Brassica oleracea HOM05D001728 ORTHO05D004174 1.3e-22 110.5 126 50.0
AagrBONN_evm.TU.Sc2ySwM_228.2363 Anthoceros agrestis HOM05D001728 ORTHO05D004174 2.8e-22 109.4 131 53.4
Carub.0007s2527 Capsella rubella HOM05D001728 ORTHO05D004174 3.7e-22 109.0 129 48.1
Aa31LG10G5870 Aethionema arabicum HOM05D001728 ORTHO05D004174 8.2e-22 107.8 119 54.6
CBR_g19546 Chara braunii HOM05D001728 ORTHO05D004174 8.2e-22 107.8 130 53.1
Duzib212G0357 Durio zibethinus HOM05D001728 ORTHO05D004174 2.4e-21 106.3 129 52.7
Migut.G00049 Erythranthe guttata HOM05D001728 ORTHO05D004174 2.4e-21 106.3 109 58.7
CARHR222630 Cardamine hirsuta HOM05D001728 ORTHO05D004174 1.2e-20 104.0 123 49.6
Nn1g01603 Nelumbo nucifera HOM05D001728 ORTHO05D004174 1.2e-20 104.0 90 64.4
Pp3c7_24370 Physcomitrium patens HOM05D001728 ORTHO05D004174 3.5e-20 102.4 130 47.7
unitig_8.g3091 Utricularia gibba HOM05D001728 ORTHO05D004174 4.5e-20 102.1 129 50.4
Nn1g04497 Nelumbo nucifera HOM05D001728 ORTHO05D004174 7.7e-20 101.3 57 86.0
arahy.Tifrunner.gnm1.ann1.JD5JQQ Arachis hypogaea HOM05D001728 ORTHO05D004174 8.5e-19 97.8 62 79.0
Prupe.7G180600 Prunus persica HOM05D001728 ORTHO05D004174 1.5e-18 97.1 68 69.1
CARHR274020 Cardamine hirsuta HOM05D001728 ORTHO05D004174 5.5e-18 95.1 56 80.4
SMO116G0349 Selaginella moellendorffii HOM05D001728 ORTHO05D004174 1.2e-17 94.0 62 74.2
Prupe.5G033600 Prunus persica HOM05D001728 ORTHO05D004174 3.6e-17 92.4 97 50.5
Prupe.7G180200 Prunus persica HOM05D001728 ORTHO05D004174 6.1e-17 91.7 68 69.1
HanXRQChr02g0048741 Helianthus annuus HOM05D001728 ORTHO05D004174 1.0e-16 90.9 124 49.2
Prupe.6G047000 Prunus persica HOM05D001728 ORTHO05D004174 1.0e-16 90.9 81 59.3
Prupe.7G179700 Prunus persica HOM05D001728 ORTHO05D004174 6.8e-16 88.2 128 42.2
vmacro02402 Vaccinium macrocarpon HOM05D001728 ORTHO05D004174 5.7e-15 85.1 56 75.0
Cre03.g202897 Chlamydomonas reinhardtii HOM05D001728 ORTHO05D004174 4.5e-12 75.5 110 41.8
HanXRQChr11g0353501 Helianthus annuus HOM05D001728 ORTHO05D004174 7.7e-12 74.7 45 73.3
Prupe.7G179900 Prunus persica HOM05D001728 ORTHO05D004174 6.5e-11 71.6 68 54.4
Prupe.5G033500 Prunus persica HOM05D001728 ORTHO05D004174 2.5e-10 69.7 54 63.0
MCO14G158 Micromonas commoda HOM05D001728 ORTHO05D004174 1.4e-08 63.9 62 48.4
Nn4g25590 Nelumbo nucifera HOM05D001728 ORTHO05D004174 1.8e-08 63.5 75 46.7
PRCOL_00004800 Prasinoderma coloniale HOM05D001728 ORTHO05D004174 2.3e-08 63.2 97 40.2


User provided reference genes

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