Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27215 Trifolium pratense HOM05D000205 ORTHO05D013496 6.0e-63 244.2 140 100.0
TPR.G32813 Trifolium pratense HOM05D000205 ORTHO05D000438 4.2e-24 115.2 141 53.9
Medtr7g094110 Medicago truncatula HOM05D000205 ORTHO05D000438 8.4e-17 90.9 150 47.3
Psat3g066800 Pisum sativum HOM05D000205 ORTHO05D000438 7.1e-16 87.8 148 44.6
Ca_08553_v3 Cicer arietinum L. HOM05D000205 ORTHO05D000438 2.7e-15 85.9 145 46.2
Ca_08587_v3 Cicer arietinum L. HOM05D000205 ORTHO05D000438 2.7e-15 85.9 145 46.2
Psat3g065840 Pisum sativum HOM05D000205 ORTHO05D000438 3.9e-14 82.0 149 45.6
Psat3g065880 Pisum sativum HOM05D000205 ORTHO05D000438 3.9e-14 82.0 143 44.1
Medtr7g094450 Medicago truncatula HOM05D000205 ORTHO05D000438 4.3e-13 78.6 146 42.5
Glyma.19G152400 Glycine max HOM05D000205 ORTHO05D000438 6.3e-12 74.7 141 41.8
Lj1g0000589 Lotus japonicus HOM05D000205 ORTHO05D000438 6.3e-12 74.7 141 39.7
Lj1g0001369 Lotus japonicus HOM05D000205 ORTHO05D000438 6.3e-12 74.7 128 41.4
Lj1g0012324 Lotus japonicus HOM05D000205 ORTHO05D000438 1.1e-11 73.9 141 40.4
arahy.Tifrunner.gnm1.ann1.CZPU8Y Arachis hypogaea HOM05D000205 ORTHO05D000438 1.4e-11 73.6 142 42.3
arahy.Tifrunner.gnm1.ann1.FFP3YJ Arachis hypogaea HOM05D000205 ORTHO05D000438 1.4e-11 73.6 142 43.7
Glyma.03G149200 Glycine max HOM05D000205 ORTHO05D000438 1.4e-11 73.6 143 42.7
VMungo1383G2588 Vigna mungo HOM05D000205 ORTHO05D000438 2.4e-11 72.8 145 42.1
Lj1g0017409 Lotus japonicus HOM05D000205 ORTHO05D000438 6.9e-11 71.2 144 39.6
Phvul.001G147100 Phaseolus vulgaris HOM05D000205 ORTHO05D000438 6.9e-11 71.2 148 41.9
Phvul.001G147200 Phaseolus vulgaris HOM05D000205 ORTHO05D000438 1.2e-10 70.5 143 40.6
QL12p023071 Quercus lobata HOM05D000205 ORTHO05D000438 5.9e-10 68.2 148 38.5
PGR119G1931 Punica granatum HOM05D000205 ORTHO05D000438 2.2e-09 66.2 142 38.7
Lalb_Chr01g0020261 Lupinus albus HOM05D000205 ORTHO05D000438 3.8e-09 65.5 124 40.3
VMungo1383G1460 Vigna mungo HOM05D000205 ORTHO05D000438 3.8e-09 65.5 134 38.8
Thhalv10022677m.g Eutrema salsugineum HOM05D000205 ORTHO05D000438 6.5e-09 64.7 123 36.6
CSS0011738 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D000438 8.5e-09 64.3 147 36.1
Eucgr.H01602 Eucalyptus grandis HOM05D000205 ORTHO05D000438 8.5e-09 64.3 137 35.8
Hma1.2p1_2318F.1_g319750 Hydrangea macrophylla HOM05D000205 ORTHO05D000438 1.1e-08 63.9 158 34.2
CANSAT25G2956 Cannabis sativa HOM05D000205 ORTHO05D000438 1.4e-08 63.5 121 38.0
Lalb_Chr25g0290241 Lupinus albus HOM05D000205 ORTHO05D000438 1.4e-08 63.5 126 39.7
CiPaw.08G101800 Carya illinoinensis HOM05D000205 ORTHO05D000438 1.9e-08 63.2 150 37.3
Sc05g0004560 Simmondsia chinensis HOM05D000205 ORTHO05D000438 1.9e-08 63.2 133 36.1
Cfa006072 Carpinus fangiana HOM05D000205 ORTHO05D000438 2.5e-08 62.8 150 37.3
EL10Ac7g17182 Beta vulgaris HOM05D000205 ORTHO05D000438 3.2e-08 62.4 151 33.1
BolC2t09335H Brassica oleracea HOM05D000205 ORTHO05D032526 3.2e-08 62.4 122 36.1
CARHR143410 Cardamine hirsuta HOM05D000205 ORTHO05D000438 4.2e-08 62.0 123 36.6
AL4G47620 Arabidopsis lyrata HOM05D000205 ORTHO05D000438 5.5e-08 61.6 123 36.6
AT2G48020 Arabidopsis thaliana HOM05D000205 ORTHO05D000438 5.5e-08 61.6 123 36.6
Hma1.2p1_0257F.1_g103970 Hydrangea macrophylla HOM05D000205 ORTHO05D000438 5.5e-08 61.6 148 36.5
Lj2C1180G17 Lonicera japonica HOM05D000205 ORTHO05D000438 5.5e-08 61.6 150 34.7
Lj2C1220T3 Lonicera japonica HOM05D000205 ORTHO05D000438 5.5e-08 61.6 150 34.7
PSO302G0074 Papaver somniferum HOM05D000205 ORTHO05D000438 5.5e-08 61.6 135 37.0
Aqoxy2G03177 Aquilegia oxysepala HOM05D000205 ORTHO05D000438 9.3e-08 60.8 155 32.9
A07p16330 Brassica napus HOM05D000205 ORTHO05D000438 9.3e-08 60.8 123 35.0
BraA07t29360Z Brassica rapa HOM05D000205 ORTHO05D000438 9.3e-08 60.8 123 35.0
Lj1C42T7 Lonicera japonica HOM05D000205 ORTHO05D000438 1.2e-07 60.5 147 34.0
BcaB08g34855 Brassica carinata HOM05D000205 ORTHO05D000438 1.6e-07 60.1 123 35.0
A07p01410 Brassica napus HOM05D000205 ORTHO05D000438 1.6e-07 60.1 123 35.0
CSS0003138 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D000438 1.6e-07 60.1 147 36.1
FAN20G0794 Fragaria x ananassa HOM05D000205 ORTHO05D000438 2.1e-07 59.7 148 37.8
Lj1C42T6 Lonicera japonica HOM05D000205 ORTHO05D000438 2.1e-07 59.7 127 37.0
Sp3g32710 Schrenkiella parvula HOM05D000205 ORTHO05D000438 2.1e-07 59.7 123 35.0
Ah.08g212820 Amaranthus hybridus HOM05D000205 ORTHO05D000438 2.7e-07 59.3 119 37.8
CSS0037164 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D000438 2.7e-07 59.3 148 33.1
FvH4_2g24290 Fragaria vesca HOM05D000205 ORTHO05D000438 2.7e-07 59.3 148 37.8
FAN24G2556 Fragaria x ananassa HOM05D000205 ORTHO05D000438 2.7e-07 59.3 148 37.8
BraA07t27935Z Brassica rapa HOM05D000205 ORTHO05D000438 3.6e-07 58.9 122 35.2
Cpa.g.sc9.137 Carica papaya HOM05D000205 ORTHO05D000438 3.6e-07 58.9 146 33.6
AUR62034583 Chenopodium quinoa HOM05D000205 ORTHO05D000438 3.6e-07 58.9 133 33.8
Eucgr.H01560 Eucalyptus grandis HOM05D000205 ORTHO05D000438 3.6e-07 58.9 142 35.9
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 3.6e-07 58.9 117 41.9
FAN15G1791 Fragaria x ananassa HOM05D000205 ORTHO05D000438 4.6e-07 58.5 148 37.8
HanXRQChr10g0282991 Helianthus annuus HOM05D000205 ORTHO05D000438 4.6e-07 58.5 32 90.6
Lsat_1_v5_gn_9_1760 Lactuca sativa HOM05D000205 ORTHO05D003784 4.6e-07 58.5 32 90.6
PSO170G0534 Papaver somniferum HOM05D000205 ORTHO05D000438 4.6e-07 58.5 135 36.3
Thecc.01G286600 Theobroma cacao HOM05D000205 ORTHO05D000438 4.6e-07 58.5 149 34.2
Aa31LG1G29440 Aethionema arabicum HOM05D000205 ORTHO05D000438 6.1e-07 58.2 123 35.0
BcaB03g14393 Brassica carinata HOM05D000205 ORTHO05D000438 6.1e-07 58.2 123 35.0
C07p24020 Brassica napus HOM05D000205 ORTHO05D000438 6.1e-07 58.2 123 35.0
BolC7t42927H Brassica oleracea HOM05D000205 ORTHO05D000438 6.1e-07 58.2 123 35.0
Cc01_g19900 Coffea canephora HOM05D000205 ORTHO05D000438 6.1e-07 58.2 32 90.6
Eucgr.H01571 Eucalyptus grandis HOM05D000205 ORTHO05D000438 6.1e-07 58.2 142 35.9
FAN20G2561 Fragaria x ananassa HOM05D000205 ORTHO05D000438 6.1e-07 58.2 120 37.5
Medtr7g094430 Medicago truncatula HOM05D000205 ORTHO05D013496 6.1e-07 58.2 33 90.9
TAR362G0506 Trochodendron aralioides HOM05D000205 ORTHO05D000438 6.1e-07 58.2 153 34.0
Actinidia24866 Actinidia chinensis HOM05D000205 ORTHO05D000438 7.9e-07 57.8 152 32.9
BcaC06g36565 Brassica carinata HOM05D000205 ORTHO05D000438 7.9e-07 57.8 122 34.4
C07p02860 Brassica napus HOM05D000205 ORTHO05D000438 7.9e-07 57.8 122 34.4
BolC7t40683H Brassica oleracea HOM05D000205 ORTHO05D000438 7.9e-07 57.8 122 34.4
AUR62036687 Chenopodium quinoa HOM05D000205 ORTHO05D000438 7.9e-07 57.8 110 36.4
Manes.05G071400 Manihot esculenta HOM05D000205 ORTHO05D000438 7.9e-07 57.8 147 35.4
RcHm_v2.0_Chr6g0292141 Rosa chinensis HOM05D000205 ORTHO05D000438 7.9e-07 57.8 143 36.4
SGA_v2.0_scaffold1G00435 Striga asiatica HOM05D000205 ORTHO05D000438 7.9e-07 57.8 32 87.5
FvH4_2g24280 Fragaria vesca HOM05D000205 ORTHO05D000438 1.0e-06 57.4 120 37.5
Rhsim01G0278000 Rhododendron simsii HOM05D000205 ORTHO05D000438 1.0e-06 57.4 144 33.3
RcHm_v2.0_Chr6g0292101 Rosa chinensis HOM05D000205 ORTHO05D000438 1.0e-06 57.4 120 36.7
Gohir.A12G006900 Gossypium hirsutum HOM05D000205 ORTHO05D000438 1.3e-06 57.0 32 84.4
Potri.002G212900 Populus trichocarpa HOM05D000205 ORTHO05D000438 1.3e-06 57.0 32 84.4
CSS0033712 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D000438 1.8e-06 56.6 148 33.1
Carub.0004s3074 Capsella rubella HOM05D000205 ORTHO05D000438 1.8e-06 56.6 125 36.8
CAN.G1172.4 Capsicum annuum HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
Ciclev10019918m.g Citrus clementina HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
Duzib138G0754 Durio zibethinus HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
Migut.D01000 Erythranthe guttata HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
FAN15G3323 Fragaria x ananassa HOM05D000205 ORTHO05D000438 1.8e-06 56.6 143 39.2
FAN27G0200 Fragaria x ananassa HOM05D000205 ORTHO05D000438 1.8e-06 56.6 148 37.2
Gohir.A08G070900 Gossypium hirsutum HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
Gohir.D12G006300 Gossypium hirsutum HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
Gorai.008G006300 Gossypium raimondii HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
Manes.01G211700 Manihot esculenta HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 81.2
Oeu001446.1 Olea europaea HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
Oeu011183.1 Olea europaea HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
SalBow3G3803 Salvia bowleyana HOM05D000205 ORTHO05D000438 1.8e-06 56.6 134 35.1
Sed0007063 Sechium edule HOM05D000205 ORTHO05D000438 1.8e-06 56.6 114 36.0
GSVIVG01011047001 Vitis vinifera HOM05D000205 ORTHO05D000438 1.8e-06 56.6 32 84.4
TWI23G0936 Tripterygium wilfordii HOM05D000205 ORTHO05D000438 2.3e-06 56.2 149 32.9
Atru.chr5.1321 Acer truncatum HOM05D000205 ORTHO05D000438 3.0e-06 55.8 32 84.4
CsaV3_6G036960 Cucumis sativus L. HOM05D000205 ORTHO05D000438 3.0e-06 55.8 143 32.9
ECA247G3546 Erigeron canadensis HOM05D000205 ORTHO05D000438 3.0e-06 55.8 30 93.3
Lsat_1_v5_gn_5_188500 Lactuca sativa HOM05D000205 ORTHO05D000438 3.0e-06 55.8 127 34.6
Psat2g047440 Pisum sativum HOM05D000205 ORTHO05D000438 3.0e-06 55.8 32 87.5
Ciclev10019923m.g Citrus clementina HOM05D000205 ORTHO05D000438 3.9e-06 55.5 32 81.2
FAN20G0057 Fragaria x ananassa HOM05D000205 ORTHO05D000438 3.9e-06 55.5 141 39.7
PSO302G0187 Papaver somniferum HOM05D000205 ORTHO05D000438 3.9e-06 55.5 140 32.1
TWI23G0531 Tripterygium wilfordii HOM05D000205 ORTHO05D000438 3.9e-06 55.5 149 32.9
CAN.G1172.1 Capsicum annuum HOM05D000205 ORTHO05D000438 5.1e-06 55.1 32 81.2
PSO170G4095 Papaver somniferum HOM05D000205 ORTHO05D000438 5.1e-06 55.1 139 32.4
Solyc09g074230.4 Solanum lycopersicum HOM05D000205 ORTHO05D000438 5.1e-06 55.1 32 81.2
Sopen09g029040 Solanum pennellii HOM05D000205 ORTHO05D000438 5.1e-06 55.1 32 81.2
PGSC0003DMG400003848 Solanum tuberosum HOM05D000205 ORTHO05D000438 5.1e-06 55.1 32 81.2
Gorai.004G084300 Gossypium raimondii HOM05D000205 ORTHO05D000438 6.7e-06 54.7 32 81.2
PSO170G5015 Papaver somniferum HOM05D000205 ORTHO05D000438 6.7e-06 54.7 32 81.2
PSO302G0142 Papaver somniferum HOM05D000205 ORTHO05D000438 6.7e-06 54.7 32 78.1
PSO302G0257 Papaver somniferum HOM05D000205 ORTHO05D000438 6.7e-06 54.7 32 81.2
Prupe.8G248600 Prunus persica HOM05D000205 ORTHO05D000438 6.7e-06 54.7 145 33.8
Sabra02G0130600 Salix brachista HOM05D000205 ORTHO05D000438 6.7e-06 54.7 32 81.2
TAR633G2210 Trochodendron aralioides HOM05D000205 ORTHO05D000438 6.7e-06 54.7 32 84.4
MSTRG.18207 Avicennia marina HOM05D000205 ORTHO05D000438 8.7e-06 54.3 132 34.8
ClCG07G000140 Citrullus lanatus HOM05D000205 ORTHO05D000438 8.7e-06 54.3 140 33.6
Prupe.8G248700 Prunus persica HOM05D000205 ORTHO05D000438 8.7e-06 54.3 147 34.7
RcHm_v2.0_Chr6g0292071 Rosa chinensis HOM05D000205 ORTHO05D000438 8.7e-06 54.3 121 31.4


User provided reference genes

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