Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27176 Trifolium pratense HOM05D000005 ORTHO05D012323 1.0e-117 426.8 224 100.0
TPR.G704 Trifolium pratense HOM05D000005 ORTHO05D012323 2.9e-27 126.3 67 91.0
Medtr8g433010 Medicago truncatula HOM05D000005 ORTHO05D000012 8.7e-24 114.8 266 35.3
Medtr8g016440 Medicago truncatula HOM05D000005 ORTHO05D000012 1.6e-22 110.5 280 34.3
Medtr8g018480 Medicago truncatula HOM05D000005 ORTHO05D012323 2.5e-18 96.7 191 36.6
Medtr8g027565 Medicago truncatula HOM05D000005 ORTHO05D012323 3.2e-18 96.3 110 52.7
Lj3g0010889 Lotus japonicus HOM05D000005 ORTHO05D000012 2.7e-17 93.2 104 50.0
Medtr8g032440 Medicago truncatula HOM05D000005 ORTHO05D000012 1.9e-15 87.0 84 57.1
Medtr8g035990 Medicago truncatula HOM05D000005 ORTHO05D000012 4.3e-15 85.9 169 34.3
Lj3g0018368 Lotus japonicus HOM05D000005 ORTHO05D000012 1.8e-13 80.5 73 57.5
Glyma.09G202766 Glycine max HOM05D000005 ORTHO05D012323 3.1e-13 79.7 79 49.4
Medtr8g032420 Medicago truncatula HOM05D000005 ORTHO05D000012 4.1e-13 79.3 103 44.7
Medtr8g433020 Medicago truncatula HOM05D000005 ORTHO05D000012 4.1e-13 79.3 103 44.7
Psat0s3979g0160 Pisum sativum HOM05D000005 ORTHO05D012323 4.1e-13 79.3 174 36.2
Psat0s3979g0240 Pisum sativum HOM05D000005 ORTHO05D012323 6.9e-13 78.6 174 35.1
Glyma.08G192900 Glycine max HOM05D000005 ORTHO05D000012 3.4e-12 76.3 143 37.8
Glyma.14G151100 Glycine max HOM05D000005 ORTHO05D000012 4.5e-12 75.9 79 53.2
arahy.Tifrunner.gnm1.ann1.5M20JS Arachis hypogaea HOM05D000005 ORTHO05D000012 5.9e-12 75.5 73 56.2
Medtr0363s0030 Medicago truncatula HOM05D000005 ORTHO05D000012 7.7e-12 75.1 71 54.9
Medtr8g038815 Medicago truncatula HOM05D000005 ORTHO05D000012 7.7e-12 75.1 71 54.9
Medtr8g076910 Medicago truncatula HOM05D000005 ORTHO05D000012 7.7e-12 75.1 114 43.0
arahy.Tifrunner.gnm1.ann1.03USKU Arachis hypogaea HOM05D000005 ORTHO05D000012 1.3e-11 74.3 73 53.4
TPR.G36358 Trifolium pratense HOM05D000005 ORTHO05D012323 1.3e-11 74.3 180 32.2
TPR.G7937 Trifolium pratense HOM05D000005 ORTHO05D012323 1.3e-11 74.3 81 51.9
arahy.Tifrunner.gnm1.ann1.Y37CV7 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.7e-11 73.9 73 53.4
arahy.Tifrunner.gnm1.ann1.C1DP1Y Arachis hypogaea HOM05D000005 ORTHO05D000012 2.2e-11 73.6 73 54.8
Glyma.07G123000 Glycine max HOM05D000005 ORTHO05D000012 2.9e-11 73.2 79 50.6
arahy.Tifrunner.gnm1.ann1.XAW1E1 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.8e-11 72.8 73 54.8
arahy.Tifrunner.gnm1.ann1.Z4U2FE Arachis hypogaea HOM05D000005 ORTHO05D000012 3.8e-11 72.8 73 54.8
Medtr8g016580 Medicago truncatula HOM05D000005 ORTHO05D012323 6.5e-11 72.0 82 50.0
Medtr8g016650 Medicago truncatula HOM05D000005 ORTHO05D012323 6.5e-11 72.0 82 50.0
TPR.G27177 Trifolium pratense HOM05D000005 ORTHO05D012323 6.5e-11 72.0 78 51.3
TPR.G25070 Trifolium pratense HOM05D000005 ORTHO05D011244 8.5e-11 71.6 72 55.6
arahy.Tifrunner.gnm1.ann1.AQDT95 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-10 71.2 72 51.4
Medtr8g016680 Medicago truncatula HOM05D000005 ORTHO05D012323 1.1e-10 71.2 69 56.5
arahy.Tifrunner.gnm1.ann1.3NFB3J Arachis hypogaea HOM05D000005 ORTHO05D000012 1.4e-10 70.9 73 52.1
arahy.Tifrunner.gnm1.ann1.88IWPW Arachis hypogaea HOM05D000005 ORTHO05D000012 1.4e-10 70.9 73 52.1
TPR.G27168 Trifolium pratense HOM05D000005 ORTHO05D012323 1.4e-10 70.9 72 56.9
arahy.Tifrunner.gnm1.ann1.04C23Q Arachis hypogaea HOM05D000005 ORTHO05D000012 1.9e-10 70.5 73 53.4
arahy.Tifrunner.gnm1.ann1.208V23 Arachis hypogaea HOM05D000005 ORTHO05D000012 2.5e-10 70.1 126 36.5
arahy.Tifrunner.gnm1.ann1.L4U9CB Arachis hypogaea HOM05D000005 ORTHO05D000012 2.5e-10 70.1 116 38.8
arahy.Tifrunner.gnm1.ann1.4C5C9J Arachis hypogaea HOM05D000005 ORTHO05D000012 3.2e-10 69.7 116 38.8
TPR.G279 Trifolium pratense HOM05D000005 ORTHO05D012323 4.2e-10 69.3 72 54.2
arahy.Tifrunner.gnm1.ann1.R3YIYS Arachis hypogaea HOM05D000005 ORTHO05D000012 5.5e-10 68.9 126 37.3
arahy.Tifrunner.gnm1.ann1.9NZ7QY Arachis hypogaea HOM05D000005 ORTHO05D000012 7.2e-10 68.6 74 48.6
arahy.Tifrunner.gnm1.ann1.ETG8N4 Arachis hypogaea HOM05D000005 ORTHO05D000012 7.2e-10 68.6 115 36.5
Lalb_Chr05g0220931 Lupinus albus HOM05D000005 ORTHO05D000012 1.2e-09 67.8 74 45.9
TPR.G36519 Trifolium pratense HOM05D000005 ORTHO05D012323 3.6e-09 66.2 72 51.4
arahy.Tifrunner.gnm1.ann1.BB34IZ Arachis hypogaea HOM05D000005 ORTHO05D000012 3.0e-08 63.2 86 44.2
arahy.Tifrunner.gnm1.ann1.F21H8S Arachis hypogaea HOM05D000005 ORTHO05D000012 8.8e-08 61.6 156 31.4
Medtr4g036080 Medicago truncatula HOM05D000005 ORTHO05D000012 5.7e-07 58.9 96 37.5
arahy.Tifrunner.gnm1.ann1.H8JIAA Arachis hypogaea HOM05D000005 ORTHO05D000012 7.4e-07 58.5 69 44.9
arahy.Tifrunner.gnm1.ann1.370D23 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.7e-06 56.2 77 41.6
arahy.Tifrunner.gnm1.ann1.3RA443 Arachis hypogaea HOM05D000005 ORTHO05D000012 4.8e-06 55.8 97 37.1
Ca_05008_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 4.8e-06 55.8 71 45.1


User provided reference genes

Program Settings