Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 3.8e-143 511.5 269 100.0
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 8.1e-101 370.9 272 78.7
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 1.6e-88 330.1 304 65.1
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 1.3e-85 320.5 209 84.2
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 5.8e-83 311.6 320 61.2
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 3.8e-82 308.9 303 63.0
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 1.1e-81 307.4 332 58.7
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 1.1e-81 307.4 307 61.6
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 1.4e-81 307.0 313 59.4
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 5.7e-78 295.0 330 56.7
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 1.7e-74 283.5 194 81.4
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 3.0e-71 272.7 297 58.9
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 5.7e-62 241.9 297 55.6
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 2.7e-56 223.0 303 53.8
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 1.0e-55 221.1 280 55.4
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.4e-44 184.1 325 46.5
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 3.1e-44 183.0 284 51.8
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 5.3e-44 182.2 323 45.2
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 7.0e-44 181.8 282 50.7
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 1.0e-39 167.9 323 42.4
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 4.0e-39 166.0 335 42.4
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 1.3e-37 161.0 319 41.1
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 6.3e-37 158.7 328 43.0
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.8e-36 157.1 325 44.0
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 4.1e-36 156.0 332 41.3
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 4.1e-36 156.0 328 38.4
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 7.0e-36 155.2 334 41.0
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 1.2e-35 154.5 328 40.9
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.6e-35 154.1 332 41.3
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 2.0e-35 153.7 329 40.7
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 4.5e-35 152.5 283 45.6
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 4.5e-35 152.5 332 41.0
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 5.0e-34 149.1 320 39.4
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 6.5e-34 148.7 335 38.5
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 6.5e-34 148.7 335 38.5
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 1.9e-33 147.1 325 38.5
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 2.1e-32 143.7 328 39.6
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 2.1e-32 143.7 331 36.6
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 2.8e-32 143.3 325 38.8
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.8e-32 143.3 332 37.3
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 4.7e-32 142.5 329 39.5
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 1.4e-31 141.0 330 38.5
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 5.2e-31 139.0 312 39.1
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.2e-30 137.9 333 37.5
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 2.0e-30 137.1 332 37.0
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 1.7e-29 134.0 329 37.7
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 2.2e-29 133.7 331 37.2
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 9.2e-28 128.3 328 37.8
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 1.2e-27 127.9 337 38.0
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.6e-27 127.5 314 37.3
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 2.7e-27 126.7 203 46.3
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 7.8e-27 125.2 346 36.1
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.3e-26 124.4 337 36.5
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 2.3e-26 123.6 337 35.9
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 5.0e-26 122.5 327 34.6
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 2.5e-25 120.2 214 44.9
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 3.3e-25 119.8 327 33.9
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 7.3e-25 118.6 148 50.0
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 4.7e-24 115.9 277 39.4
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 8.0e-24 115.2 378 32.3
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 2.3e-23 113.6 330 34.2
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 4.0e-23 112.8 343 35.3
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 8.9e-23 111.7 314 34.4
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.5e-22 110.9 173 45.1
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 5.7e-22 109.0 336 33.6
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 9.8e-22 108.2 317 35.3
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 9.8e-22 108.2 337 34.1
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 1.7e-21 107.5 311 35.0
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 3.7e-21 106.3 353 33.1
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 3.7e-21 106.3 334 32.9
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 1.1e-20 104.8 269 36.4
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 9.2e-20 101.7 281 35.9
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 2.0e-19 100.5 291 38.5
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 3.5e-19 99.8 335 30.7
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 4.6e-19 99.4 202 45.5
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.3e-18 97.8 242 36.4
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 3.0e-18 96.7 326 35.6
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 2.5e-17 93.6 295 35.6
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 1.6e-16 90.9 324 34.9
Psat4g227520 Pisum sativum HOM05D006273 ORTHO05D007607 1.6e-16 90.9 187 42.8
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 2.8e-16 90.1 277 34.7
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 2.8e-16 90.1 203 38.9
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.8e-16 90.1 175 40.0
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 8.0e-16 88.6 211 36.5
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 5.2e-15 85.9 317 32.8
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.2e-14 84.7 307 35.5
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 1.2e-14 84.7 288 34.0
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 1.5e-14 84.3 294 33.3
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 1.9e-12 77.4 327 31.8
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 2.0e-11 73.9 308 32.1
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 4.6e-11 72.8 292 36.0
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 1.3e-10 71.2 336 31.0
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 6.6e-10 68.9 287 31.0
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.1e-09 68.2 306 33.7
Medtr5g005040 Medicago truncatula HOM05D006273 ORTHO05D007607 2.5e-09 67.0 154 35.7
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 2.5e-09 67.0 179 33.0
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 4.3e-09 66.2 321 31.8
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 7.3e-09 65.5 304 34.2
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 1.6e-08 64.3 305 32.8
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.6e-08 64.3 281 34.2
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 2.8e-08 63.5 348 28.2
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 3.6e-08 63.2 50 56.0
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 4.7e-08 62.8 310 30.0
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 6.2e-08 62.4 141 37.6
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 8.1e-08 62.0 251 28.3
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.4e-07 61.2 277 29.2
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 6.8e-07 58.9 259 32.4
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 1.5e-06 57.8 275 29.8
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 4.4e-06 56.2 335 27.8
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 5.8e-06 55.8 270 32.2
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 9.9e-06 55.1 288 29.5
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 9.9e-06 55.1 289 32.9


User provided reference genes

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