Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 1.1e-127 459.9 227 100.0
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 4.0e-117 424.9 229 91.3
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 6.8e-117 424.1 227 91.2
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 5.8e-108 394.4 228 81.6
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 1.9e-106 389.4 226 84.1
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 1.5e-103 379.8 226 81.9
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 1.9e-103 379.4 212 84.0
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 3.6e-102 375.2 227 80.6
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 4.7e-102 374.8 227 80.2
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 5.2e-101 371.3 227 80.6
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 2.9e-99 365.5 212 79.2
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 4.9e-99 364.8 214 81.3
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 4.9e-99 364.8 214 81.3
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 1.1e-98 363.6 214 78.5
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 2.4e-98 362.5 212 80.7
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 2.4e-98 362.5 213 77.5
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 5.4e-98 361.3 213 79.8
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 2.7e-97 359.0 213 75.6
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.5e-97 358.6 214 77.1
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 3.5e-97 358.6 211 78.7
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 7.8e-97 357.5 214 78.5
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 1.7e-96 356.3 215 78.6
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.7e-96 356.3 213 77.0
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 2.3e-96 355.9 214 76.2
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 3.0e-96 355.5 211 78.7
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 3.9e-96 355.1 217 77.4
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 3.9e-96 355.1 216 76.9
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 6.6e-96 354.4 214 75.7
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 1.1e-95 353.6 205 79.5
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 1.1e-95 353.6 215 78.1
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 2.5e-95 352.4 219 75.8
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 3.3e-95 352.1 212 76.4
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 3.3e-95 352.1 212 77.4
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 3.3e-95 352.1 222 74.3
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 7.3e-95 350.9 220 76.4
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 9.6e-95 350.5 212 76.9
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 1.6e-94 349.7 213 76.5
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 1.6e-94 349.7 212 76.9
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 2.8e-94 349.0 212 77.8
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 6.2e-94 347.8 227 72.7
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 8.1e-94 347.4 213 76.1
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 1.1e-93 347.1 200 76.5
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 1.1e-93 347.1 213 76.5
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 1.4e-93 346.7 219 74.0
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 1.4e-93 346.7 212 75.9
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 2.4e-93 345.9 217 73.7
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 3.1e-93 345.5 213 75.1
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 3.1e-93 345.5 212 74.5
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 1.2e-92 343.6 227 72.2
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 1.2e-92 343.6 212 74.5
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 1.5e-92 343.2 204 77.5
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.6e-92 342.4 215 75.3
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 5.8e-92 341.3 215 74.4
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 2.2e-91 339.3 214 72.4
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 2.9e-91 339.0 215 74.9
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 3.8e-91 338.6 226 71.2
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 1.1e-90 337.0 215 72.6
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 1.4e-90 336.7 212 72.2
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 1.9e-90 336.3 213 73.7
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 4.2e-90 335.1 211 74.9
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 5.4e-90 334.7 213 71.4
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 5.4e-90 334.7 215 74.0
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 1.2e-89 333.6 210 73.3
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 3.5e-89 332.0 211 74.4
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 3.5e-89 332.0 211 74.4
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.5e-89 332.0 215 73.5
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 6.0e-89 331.3 211 73.9
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 2.3e-88 329.3 211 73.5
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 6.6e-88 327.8 212 73.1
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 6.6e-88 327.8 214 71.5
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 5.6e-87 324.7 214 73.4
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 5.6e-87 324.7 209 71.3
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 9.6e-87 323.9 211 72.0
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 1.3e-86 323.6 209 72.7
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.6e-86 323.2 212 71.7
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 2.1e-86 322.8 214 72.4
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 2.1e-86 322.8 214 72.4
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 7.6e-84 314.3 224 68.3
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.4e-82 309.3 194 73.7
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 3.2e-82 308.9 210 68.1
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 3.9e-80 302.0 239 61.9
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 5.1e-80 301.6 172 76.2
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 5.6e-79 298.1 178 75.3
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 2.8e-78 295.8 162 80.2
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 1.5e-76 290.0 187 70.6
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 2.9e-75 285.8 213 65.3
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 2.9e-75 285.8 180 73.3
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 3.1e-69 265.8 212 65.6
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 1.2e-68 263.8 145 89.7
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 4.5e-68 261.9 150 75.3
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 5.8e-68 261.5 198 58.1
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 2.3e-64 249.6 216 62.0
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 6.7e-64 248.1 161 72.0
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 1.3e-62 243.8 197 54.8
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 1.5e-60 236.9 209 55.5
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 2.2e-59 233.0 140 75.7
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 5.0e-59 231.9 213 52.1
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 4.6e-57 225.3 130 77.7
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 5.7e-47 191.8 115 76.5
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 9.7e-47 191.0 126 69.8
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 7.0e-45 184.9 142 55.6
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 6.5e-43 178.3 103 77.7
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 1.8e-37 160.2 208 37.5
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 7.2e-34 148.3 183 35.0
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 2.7e-33 146.4 128 57.8
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 1.8e-32 143.7 128 56.2
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 2.2e-30 136.7 101 61.4
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 6.3e-30 135.2 79 74.7
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 1.7e-27 127.1 74 74.3
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 8.5e-27 124.8 170 36.5
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 2.1e-25 120.2 72 72.2
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 2.2e-22 110.2 73 64.4
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.5e-18 96.7 51 80.4
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 7.2e-18 95.1 64 70.3
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 5.7e-15 85.5 71 57.7
CBR_g50885 Chara braunii HOM05D006727 ORTHO05D008408 3.7e-14 82.8 123 33.3
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 1.2e-12 77.8 60 70.0
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 3.9e-11 72.8 56 66.1
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 8.9e-08 61.6 93 43.0


User provided reference genes

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