Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26922 Trifolium pratense HOM05D004001 ORTHO05D004559 0.0e+00 1235.7 658 100.0
Psat3g115320 Pisum sativum HOM05D004001 ORTHO05D004559 7.7e-262 907.1 819 65.7
Ca_07831_v3 Cicer arietinum L. HOM05D004001 ORTHO05D004559 2.2e-261 905.6 819 66.8
Medtr7g075140 Medicago truncatula HOM05D004001 ORTHO05D004559 6.5e-261 904.0 831 66.7
Glyma.18G221900 Glycine max HOM05D004001 ORTHO05D004559 4.9e-232 808.1 805 60.7
Glyma.09G268000 Glycine max HOM05D004001 ORTHO05D004559 3.2e-223 778.9 827 58.4
Lj1g0027935 Lotus japonicus HOM05D004001 ORTHO05D004559 1.1e-220 770.4 820 58.2
Phvul.008G075200 Phaseolus vulgaris HOM05D004001 ORTHO05D004559 1.8e-218 763.1 825 57.5
arahy.Tifrunner.gnm1.ann1.2UV9R4 Arachis hypogaea HOM05D004001 ORTHO05D004559 4.1e-215 751.9 823 56.1
arahy.Tifrunner.gnm1.ann1.H5PXMS Arachis hypogaea HOM05D004001 ORTHO05D004559 2.3e-213 746.1 802 56.6
arahy.Tifrunner.gnm1.ann1.0Y1PWL Arachis hypogaea HOM05D004001 ORTHO05D004559 4.3e-212 741.9 819 55.4
arahy.Tifrunner.gnm1.ann1.CI1NNE Arachis hypogaea HOM05D004001 ORTHO05D004559 1.1e-210 737.3 819 55.6
Lalb_Chr12g0208391 Lupinus albus HOM05D004001 ORTHO05D004559 3.4e-209 732.3 824 55.8
Lalb_Chr12g0208441 Lupinus albus HOM05D004001 ORTHO05D004559 3.4e-209 732.3 824 55.8
arahy.Tifrunner.gnm1.ann1.EYC1DY Arachis hypogaea HOM05D004001 ORTHO05D004559 2.5e-204 716.1 824 55.8
Lalb_Chr07g0189651 Lupinus albus HOM05D004001 ORTHO05D004559 1.6e-203 713.4 824 54.0
arahy.Tifrunner.gnm1.ann1.9J1L2I Arachis hypogaea HOM05D004001 ORTHO05D004559 6.4e-200 701.4 823 54.8
arahy.Tifrunner.gnm1.ann1.JKPH3R Arachis hypogaea HOM05D004001 ORTHO05D004559 1.7e-184 650.2 813 51.9
Haze_16831 Corylus avellana HOM05D004001 ORTHO05D004559 2.3e-165 586.6 825 46.1
QL08p051978 Quercus lobata HOM05D004001 ORTHO05D004559 5.1e-165 585.5 873 46.3
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 3.4e-161 572.8 838 46.1
CiPaw.01G260600 Carya illinoinensis HOM05D004001 ORTHO05D004559 4.5e-161 572.4 863 45.4
Cfa001702 Carpinus fangiana HOM05D004001 ORTHO05D004559 2.2e-160 570.1 825 46.2
Atru.chr5.325 Acer truncatum HOM05D004001 ORTHO05D004559 1.4e-159 567.4 823 45.7
MD02G1201400 Malus domestica HOM05D004001 ORTHO05D004559 3.2e-159 566.2 839 45.6
Manes.05G044000 Manihot esculenta HOM05D004001 ORTHO05D004559 7.2e-159 565.1 843 46.6
Potri.014G071400 Populus trichocarpa HOM05D004001 ORTHO05D004559 1.8e-157 560.5 827 46.9
Actinidia12272 Actinidia chinensis HOM05D004001 ORTHO05D004559 8.8e-157 558.1 836 45.6
Duzib138G1007 Durio zibethinus HOM05D004001 ORTHO05D004559 7.4e-156 555.1 833 46.5
CANSAT56G0321 Cannabis sativa HOM05D004001 ORTHO05D004559 2.6e-153 546.6 827 46.4
Thecc.01G374400 Theobroma cacao HOM05D004001 ORTHO05D004559 6.5e-152 542.0 836 46.1
Actinidia31422 Actinidia chinensis HOM05D004001 ORTHO05D004559 1.0e-149 534.6 840 44.8
Prupe.2G147400 Prunus persica HOM05D004001 ORTHO05D004559 1.1e-148 531.2 773 46.7
COL.COLO4_12572 Corchorus olitorius HOM05D004001 ORTHO05D004559 1.1e-146 524.6 761 46.8
Gorai.007G092200 Gossypium raimondii HOM05D004001 ORTHO05D004559 4.1e-146 522.7 838 45.1
TAR636G3381 Trochodendron aralioides HOM05D004001 ORTHO05D004559 5.3e-146 522.3 838 43.3
RcHm_v2.0_Chr1g0350831 Rosa chinensis HOM05D004001 ORTHO05D004559 2.2e-144 516.9 834 43.6
TAR629G2254 Trochodendron aralioides HOM05D004001 ORTHO05D004559 2.2e-144 516.9 848 44.1
TWI14G1161 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 1.6e-142 510.8 833 44.5
Sabra14G0050700 Salix brachista HOM05D004001 ORTHO05D004559 6.1e-142 508.8 828 44.7
Gohir.D12G105400 Gossypium hirsutum HOM05D004001 ORTHO05D004559 2.6e-140 503.4 807 44.9
Lj9C572T3 Lonicera japonica HOM05D004001 ORTHO05D004559 7.5e-140 501.9 831 43.6
Gohir.D11G086300 Gossypium hirsutum HOM05D004001 ORTHO05D004559 1.2e-137 494.6 838 44.0
CsaV3_3G009550 Cucumis sativus L. HOM05D004001 ORTHO05D004559 5.9e-137 492.3 835 42.9
Gohir.A11G081700 Gossypium hirsutum HOM05D004001 ORTHO05D004559 1.7e-136 490.7 688 49.6
FAN10G1690 Fragaria x ananassa HOM05D004001 ORTHO05D004559 6.5e-136 488.8 811 42.8
Eucgr.E01409 Eucalyptus grandis HOM05D004001 ORTHO05D004559 2.5e-135 486.9 835 42.9
FAN03G0266 Fragaria x ananassa HOM05D004001 ORTHO05D004559 3.2e-135 486.5 842 42.3
FAN06G2206 Fragaria x ananassa HOM05D004001 ORTHO05D004559 9.4e-135 485.0 836 42.0
Solyc01g091500.3 Solanum lycopersicum HOM05D004001 ORTHO05D004559 9.4e-135 485.0 852 41.9
PGSC0003DMG400012752 Solanum tuberosum HOM05D004001 ORTHO05D004559 1.6e-134 484.2 843 41.8
Ciclev10018784m.g Citrus clementina HOM05D004001 ORTHO05D004559 1.4e-133 481.1 823 43.5
FAN10G1409 Fragaria x ananassa HOM05D004001 ORTHO05D004559 9.8e-132 474.9 836 41.6
Sopen01g037250 Solanum pennellii HOM05D004001 ORTHO05D004559 9.8e-132 474.9 858 41.4
Cc02_g36540 Coffea canephora HOM05D004001 ORTHO05D004559 2.2e-131 473.8 848 41.3
FvH4_7g12090 Fragaria vesca HOM05D004001 ORTHO05D004559 2.2e-131 473.8 836 41.6
Gorai.008G114700 Gossypium raimondii HOM05D004001 ORTHO05D004559 4.8e-131 472.6 835 42.2
FAN06G4715 Fragaria x ananassa HOM05D004001 ORTHO05D004559 1.1e-130 471.5 836 41.4
Nn4g26437 Nelumbo nucifera HOM05D004001 ORTHO05D004559 1.1e-130 471.5 842 41.7
CAN.G170.4 Capsicum annuum HOM05D004001 ORTHO05D004559 1.8e-130 470.7 852 41.5
Aqoxy7G00586 Aquilegia oxysepala HOM05D004001 ORTHO05D004559 7.7e-129 465.3 812 41.3
PSO782G3046 Papaver somniferum HOM05D004001 ORTHO05D004559 1.7e-128 464.2 797 40.8
SalBow5G4135 Salvia bowleyana HOM05D004001 ORTHO05D004559 1.5e-127 461.1 848 40.6
Nitab4.5_0010473g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 1.9e-127 460.7 854 41.0
Rhsim07G0025900 Rhododendron simsii HOM05D004001 ORTHO05D004559 2.5e-127 460.3 724 44.3
MSTRG.20759 Avicennia marina HOM05D004001 ORTHO05D004559 2.1e-126 457.2 879 39.8
Rhsim07G0026000 Rhododendron simsii HOM05D004001 ORTHO05D004559 4.7e-126 456.1 754 42.7
Nitab4.5_0004320g0020 Nicotiana tabacum HOM05D004001 ORTHO05D004559 6.1e-126 455.7 871 40.9
GSVIVG01027630001 Vitis vinifera HOM05D004001 ORTHO05D004559 1.0e-125 454.9 824 41.9
PSO478G3708 Papaver somniferum HOM05D004001 ORTHO05D004559 2.3e-125 453.8 834 40.0
Peaxi162Scf00021g01316 Petunia axillaris HOM05D004001 ORTHO05D004559 4.0e-125 453.0 852 41.2
Hund17008 Selenicereus undatus HOM05D004001 ORTHO05D004559 4.9e-123 446.0 910 38.9
AUR62013619 Chenopodium quinoa HOM05D004001 ORTHO05D004559 2.3e-120 437.2 786 39.8
ClCG05G002120 Citrullus lanatus HOM05D004001 ORTHO05D004559 2.9e-120 436.8 928 38.9
EL10Ac1g00911 Beta vulgaris HOM05D004001 ORTHO05D004559 4.7e-118 429.5 805 39.5
VMungo1383G1498 Vigna mungo HOM05D004001 ORTHO05D004559 8.0e-118 428.7 395 67.8
Sc26g0001190 Simmondsia chinensis HOM05D004001 ORTHO05D004559 1.4e-117 427.9 817 39.9
AUR62004229 Chenopodium quinoa HOM05D004001 ORTHO05D004559 1.5e-116 424.5 824 38.7
HanXRQChr03g0093811 Helianthus annuus HOM05D004001 ORTHO05D004559 1.1e-114 418.3 837 38.9
Thhalv10001303m.g Eutrema salsugineum HOM05D004001 ORTHO05D004559 5.9e-113 412.5 810 37.9
MELO3C006177.2 Cucumis melo HOM05D004001 ORTHO05D004559 1.0e-112 411.8 768 41.3
BcaB02g08998 Brassica carinata HOM05D004001 ORTHO05D004559 6.6e-112 409.1 844 38.4
vmacro13388 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 1.5e-111 407.9 753 43.4
A05p05490 Brassica napus HOM05D004001 ORTHO05D004559 4.3e-111 406.4 841 37.0
Migut.B01647 Erythranthe guttata HOM05D004001 ORTHO05D004559 5.6e-111 406.0 828 38.3
C04p06430 Brassica napus HOM05D004001 ORTHO05D004559 2.8e-110 403.7 844 37.4
BcaC02g12205 Brassica carinata HOM05D004001 ORTHO05D004559 6.2e-110 402.5 844 37.4
AL4G44630 Arabidopsis lyrata HOM05D004001 ORTHO05D004559 4.0e-109 399.8 855 37.0
BolC4t22266H Brassica oleracea HOM05D004001 ORTHO05D004559 6.8e-109 399.1 859 36.8
BraA05t19519Z Brassica rapa HOM05D004001 ORTHO05D004559 5.8e-108 396.0 856 36.4
Sp4g27490 Schrenkiella parvula HOM05D004001 ORTHO05D004559 9.8e-108 395.2 844 36.8
PGR042G2753 Punica granatum HOM05D004001 ORTHO05D004559 1.7e-107 394.4 908 36.1
ECA240G2591 Erigeron canadensis HOM05D004001 ORTHO05D004559 2.0e-105 387.5 790 38.5
CARHR140650 Cardamine hirsuta HOM05D004001 ORTHO05D004559 3.5e-105 386.7 845 36.4
AT2G45460 Arabidopsis thaliana HOM05D004001 ORTHO05D004559 4.6e-105 386.3 851 36.8
Aa31LG1G26960 Aethionema arabicum HOM05D004001 ORTHO05D004559 6.0e-105 386.0 850 36.2
Gohir.A12G102200 Gossypium hirsutum HOM05D004001 ORTHO05D004559 7.8e-105 385.6 805 39.9
Carub.0004s2807 Capsella rubella HOM05D004001 ORTHO05D004559 3.0e-104 383.6 846 36.4
SGA_v2.0_scaffold95G28893 Striga asiatica HOM05D004001 ORTHO05D004559 5.0e-104 382.9 832 36.9
Lj7C526G13 Lonicera japonica HOM05D004001 ORTHO05D004559 5.6e-103 379.4 823 37.1
Oeu037907.1 Olea europaea HOM05D004001 ORTHO05D004559 3.2e-98 363.6 846 35.9
Sed0014964 Sechium edule HOM05D004001 ORTHO05D004559 6.0e-97 359.4 774 40.1
unitig_8.g3817 Utricularia gibba HOM05D004001 ORTHO05D004559 6.0e-97 359.4 801 35.8
Lsat_1_v5_gn_3_133301 Lactuca sativa HOM05D004001 ORTHO05D004559 3.0e-96 357.1 829 36.6
MBI11_g23939_MAGBIO Magnolia biondii HOM05D004001 ORTHO05D004559 5.8e-92 342.8 726 38.7
Ah.16g103740 Amaranthus hybridus HOM05D004001 ORTHO05D004559 1.6e-89 334.7 813 35.3
CSS0038978 Camellia sinensis var. sinensis HOM05D004001 ORTHO05D004559 8.1e-86 322.4 307 56.4
CDE04G0282 Ceratophyllum demersum HOM05D004001 ORTHO05D004559 3.4e-84 317.0 810 32.8
Os03g0127600 Oryza sativa ssp. japonica HOM05D004001 ORTHO05D004559 1.1e-77 295.4 815 31.3
SGA_v2.0_scaffold153G37027 Striga asiatica HOM05D004001 ORTHO05D001724 2.0e-76 291.2 830 32.7
ATR0757G164 Amborella trichopoda HOM05D004001 ORTHO05D004559 3.9e-72 276.9 845 29.9
CSS0022656 Camellia sinensis var. sinensis HOM05D004001 ORTHO05D004559 7.4e-71 272.7 382 50.5
arahy.Tifrunner.gnm1.ann1.5M5P73 Arachis hypogaea HOM05D004001 ORTHO05D004559 8.1e-70 269.2 336 50.6
SHI13515 Sapria himalayana HOM05D004001 ORTHO05D004559 1.2e-68 265.4 297 49.2
DCAR_006876 Daucus carota HOM05D004001 ORTHO05D004559 3.4e-68 263.8 394 48.5
arahy.Tifrunner.gnm1.ann1.RB3Z54 Arachis hypogaea HOM05D004001 ORTHO05D004559 5.8e-68 263.1 482 41.3
Zm00001eb403560 Zea mays HOM05D004001 ORTHO05D004559 2.9e-67 260.8 828 30.9
Zm00001eb002020 Zea mays HOM05D004001 ORTHO05D004559 1.3e-62 245.4 777 29.9
SalBow3G1117 Salvia bowleyana HOM05D004001 ORTHO05D004559 5.1e-56 223.4 188 59.6
Actinidia33460 Actinidia chinensis HOM05D004001 ORTHO05D004559 8.7e-56 222.6 181 64.1
SEGI_05063 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 1.1e-55 222.2 816 26.0
HPP92_018394 Vanilla planifolia HOM05D004001 ORTHO05D004559 1.9e-55 221.5 580 32.9
DCAR_006877 Daucus carota HOM05D004001 ORTHO05D004559 3.8e-51 207.2 304 41.8
unitig_31.g34038 Utricularia gibba HOM05D004001 ORTHO05D004559 1.4e-45 188.7 520 32.3
AagrBONN_evm.TU.Sc2ySwM_362.1643 Anthoceros agrestis HOM05D004001 ORTHO05D004559 8.5e-43 179.5 353 34.8
VMungo1383G3044 Vigna mungo HOM05D004001 ORTHO05D004559 5.5e-42 176.8 137 70.1
Mapoly0005s0201 Marchantia polymorpha HOM05D004001 ORTHO05D004559 2.2e-35 154.8 232 39.2
Pp3c5_28010 Physcomitrium patens HOM05D004001 ORTHO05D004559 1.5e-31 142.1 342 31.9
vmacro13387 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 1.7e-30 138.7 100 64.0
arahy.Tifrunner.gnm1.ann1.FJEF2G Arachis hypogaea HOM05D004001 ORTHO05D004559 8.2e-30 136.3 389 33.9
Mapoly0048s0074 Marchantia polymorpha HOM05D004001 ORTHO05D004559 8.2e-30 136.3 240 35.0
Hma1.2p1_1793F.1_g302630 Hydrangea macrophylla HOM05D004001 ORTHO05D004559 1.9e-26 125.2 98 60.2
Hma1.2p1_3528F.1_g336625 Hydrangea macrophylla HOM05D004001 ORTHO05D004559 1.9e-26 125.2 98 60.2
Oeu005774.1 Olea europaea HOM05D004001 ORTHO05D004559 4.2e-26 124.0 143 52.4
Rhsim07G0026800 Rhododendron simsii HOM05D004001 ORTHO05D004559 2.0e-20 105.1 258 39.9
arahy.Tifrunner.gnm1.ann1.63QVJR Arachis hypogaea HOM05D004001 ORTHO05D004559 2.5e-18 98.2 363 32.8
arahy.Tifrunner.gnm1.ann1.2V3ERI Arachis hypogaea HOM05D004001 ORTHO05D004559 3.6e-17 94.4 363 32.2
Psat6g122920 Pisum sativum HOM05D004001 ORTHO05D004559 1.8e-16 92.0 46 95.7
arahy.Tifrunner.gnm1.ann1.K6PBMX Arachis hypogaea HOM05D004001 ORTHO05D004559 2.0e-15 88.6 169 37.9
arahy.Tifrunner.gnm1.ann1.DK59KL Arachis hypogaea HOM05D004001 ORTHO05D004559 7.5e-15 86.7 108 49.1
EL10Ac2g04735 Beta vulgaris HOM05D002948 ORTHO05D003577 2.8e-14 84.7 120 43.3
arahy.Tifrunner.gnm1.ann1.Y88425 Arachis hypogaea HOM05D004001 ORTHO05D004559 8.3e-14 83.2 148 37.2
vmacro22718 Vaccinium macrocarpon HOM05D004001 ORTHO05D004559 1.1e-13 82.8 65 67.7
arahy.Tifrunner.gnm1.ann1.8X1DD2 Arachis hypogaea HOM05D004001 ORTHO05D004559 1.2e-12 79.3 97 50.5
Hma1.2p1_1793F.1_g302640 Hydrangea macrophylla HOM05D004001 ORTHO05D004559 3.8e-11 74.3 63 55.6
Dinv00152 Davidia involucrata HOM05D026811 ORTHO05D004559 1.6e-09 68.9 56 60.7
Dinv00153 Davidia involucrata HOM05D004001 ORTHO05D004559 1.6e-09 68.9 56 60.7
Dinv00151 Davidia involucrata HOM05D026811 ORTHO05D004559 1.8e-08 65.5 52 61.5
TWI56G0444 Tripterygium wilfordii HOM05D004001 ORTHO05D004559 6.8e-08 63.5 118 37.3
SMO147G0240 Selaginella moellendorffii HOM05D004001 ORTHO05D004559 7.5e-07 60.1 246 28.0
SEGI_21780 Sequoiadendron giganteum HOM05D004001 ORTHO05D004559 3.7e-06 57.8 588 20.7


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