Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 8.4e-207 723.4 353 100.0
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.8e-177 625.9 356 86.8
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 5.9e-176 620.9 354 85.6
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 7.2e-166 587.4 358 81.8
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 1.6e-157 559.7 357 77.9
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 2.0e-152 542.7 355 76.3
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 7.3e-150 534.3 380 72.1
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.4e-145 519.2 356 72.8
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 3.2e-145 518.8 356 72.2
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 2.3e-143 512.7 354 73.2
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 3.3e-126 455.7 362 63.8
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.2e-123 447.2 365 61.6
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 9.9e-123 444.1 365 61.9
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.3e-122 443.7 371 62.5
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 2.2e-122 443.0 371 62.5
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 5.4e-121 438.3 368 61.1
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 5.4e-121 438.3 358 63.1
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 7.1e-121 438.0 357 62.2
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 1.6e-120 436.8 365 61.4
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.3e-119 433.0 365 60.3
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.9e-119 432.2 365 60.8
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 5.1e-119 431.8 364 60.4
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 6.6e-119 431.4 385 57.7
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 4.3e-118 428.7 370 60.5
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 7.3e-118 427.9 373 60.9
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 9.6e-118 427.6 443 52.6
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 2.8e-117 426.0 411 56.0
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 3.6e-117 425.6 399 57.6
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 3.1e-116 422.5 372 59.7
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 6.9e-116 421.4 370 59.5
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.7e-114 416.8 364 58.5
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 6.4e-114 414.8 401 54.9
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.1e-113 414.1 366 58.2
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 3.5e-112 409.1 357 60.8
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 4.6e-112 408.7 271 77.1
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.3e-111 407.1 443 50.1
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 1.8e-111 406.8 344 60.5
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 2.3e-111 406.4 365 58.1
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 2.3e-111 406.4 445 50.3
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.9e-110 403.3 329 62.0
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 7.4e-110 401.4 393 53.2
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 2.1e-109 399.8 262 72.5
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 3.6e-109 399.1 284 69.0
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 8.1e-109 397.9 402 52.5
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 8.1e-109 397.9 267 72.3
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 1.4e-108 397.1 375 57.9
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 3.1e-108 396.0 365 58.9
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 3.1e-108 396.0 384 54.7
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 4.0e-108 395.6 370 55.1
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 5.3e-108 395.2 367 58.3
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 2.9e-106 389.4 254 71.3
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 3.8e-106 389.0 374 57.0
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 6.4e-106 388.3 373 56.0
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 6.4e-106 388.3 370 57.6
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 6.4e-106 388.3 373 56.8
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 8.4e-106 387.9 417 52.5
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 3.2e-105 386.0 370 57.8
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 5.5e-105 385.2 304 62.5
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 5.5e-105 385.2 353 56.4
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 6.0e-104 381.7 330 60.3
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 6.0e-104 381.7 303 63.0
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 6.0e-104 381.7 367 55.3
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 3.0e-103 379.4 315 60.0
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 3.9e-103 379.0 295 65.4
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 6.2e-101 371.7 258 68.2
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.8e-100 370.2 357 54.9
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 2.4e-100 369.8 315 59.7
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.4e-100 369.8 383 53.5
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 2.6e-99 366.3 251 69.3
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 7.6e-99 364.8 283 63.6
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.9e-98 362.8 359 54.6
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.2e-96 357.5 313 60.1
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 1.2e-96 357.5 390 51.8
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 4.6e-96 355.5 301 59.5
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 4.6e-96 355.5 301 59.5
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 7.9e-96 354.8 393 49.9
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 3.9e-95 352.4 369 51.2
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.1e-94 350.9 306 58.8
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 1.5e-91 340.5 352 53.1
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 4.2e-89 332.4 342 53.8
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 1.9e-86 323.6 408 47.5
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 2.8e-85 319.7 383 45.4
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 8.2e-85 318.2 383 46.0
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 5.9e-83 312.0 279 59.1
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 1.7e-82 310.5 289 55.4
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 7.4e-78 295.0 373 46.6
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 1.8e-76 290.4 338 51.8
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 4.5e-75 285.8 172 76.7
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 5.5e-73 278.9 316 45.9
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 3.6e-72 276.2 182 72.0
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.6e-67 260.8 251 53.0
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.5e-65 253.4 278 51.8
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 5.5e-65 252.3 273 52.0
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 6.7e-63 245.4 288 49.3
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 4.4e-62 242.7 196 57.7
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 7.5e-62 241.9 364 41.5
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 8.0e-56 221.9 346 43.6
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 9.1e-52 208.4 152 61.8
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 7.7e-51 205.3 210 46.7
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 5.5e-49 199.1 178 58.4
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 5.2e-47 192.6 113 74.3
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 3.1e-44 183.3 354 38.1
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 5.4e-44 182.6 247 40.9
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 5.2e-39 166.0 91 84.6
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 9.8e-38 161.8 225 44.4
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 2.0e-35 154.1 87 75.9
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 8.0e-32 142.1 123 61.0
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 6.8e-31 139.0 84 71.4
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 5.0e-26 122.9 281 30.2
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 8.6e-26 122.1 232 39.2
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.8e-24 117.1 273 33.3
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 4.0e-23 113.2 134 44.8
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 3.9e-18 96.7 146 43.2
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 6.6e-18 95.9 84 53.6
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 1.3e-10 71.6 58 53.4
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 5.6e-09 66.2 47 57.4
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.2e-08 65.1 129 36.4
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.2e-06 58.5 181 30.4


User provided reference genes

Program Settings