Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 0.0e+00 1159.1 620 100.0
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.3e-66 257.7 138 92.0
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 2.8e-64 250.8 138 90.6
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 5.5e-60 236.5 138 87.0
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 2.2e-56 224.6 138 79.7
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 4.1e-55 220.3 138 80.4
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 5.3e-55 219.9 139 77.0
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.2e-54 218.8 138 79.0
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 3.5e-54 217.2 138 77.5
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 5.0e-53 213.4 138 76.8
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 6.7e-50 203.0 135 71.9
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 1.2e-49 202.2 130 72.3
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 4.4e-49 200.3 135 71.1
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.3e-48 198.7 131 72.5
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.3e-48 198.7 131 73.3
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.7e-48 198.4 133 69.2
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 2.2e-48 198.0 127 74.8
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 3.7e-48 197.2 131 68.7
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 4.8e-48 196.8 134 74.6
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 6.3e-48 196.4 131 71.8
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 8.2e-48 196.1 123 76.4
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 8.2e-48 196.1 129 71.3
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.1e-47 195.7 131 71.0
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.1e-47 195.7 128 73.4
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 1.8e-47 194.9 131 71.0
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.4e-47 194.5 132 70.5
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 1.2e-46 192.2 129 68.2
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 2.0e-46 191.4 131 69.5
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 2.7e-46 191.0 131 70.2
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 4.5e-46 190.3 131 66.4
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 4.5e-46 190.3 146 63.7
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 1.7e-45 188.3 123 71.5
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 2.9e-45 187.6 147 62.6
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.0e-45 186.8 131 69.5
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 6.5e-45 186.4 131 71.0
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 8.5e-45 186.0 130 69.2
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.1e-44 185.7 131 67.9
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.9e-44 184.9 124 71.0
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.9e-44 184.9 143 61.5
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 2.5e-44 184.5 131 66.4
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 2.5e-44 184.5 134 68.7
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 4.2e-44 183.7 131 67.2
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 7.2e-44 183.0 127 67.7
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 9.4e-44 182.6 131 65.6
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.2e-43 182.2 127 67.7
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.6e-43 181.8 128 66.4
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.6e-43 181.8 128 66.4
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.6e-43 181.8 131 66.4
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.6e-43 181.8 131 66.4
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.1e-43 181.4 125 68.0
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 2.7e-43 181.0 130 68.5
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 2.7e-43 181.0 129 69.8
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 2.7e-43 181.0 131 61.8
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 3.6e-43 180.6 137 65.0
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 4.7e-43 180.3 131 61.8
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 1.0e-42 179.1 127 66.1
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.4e-42 178.7 125 66.4
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 1.4e-42 178.7 127 66.1
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 1.4e-42 178.7 127 66.1
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.4e-42 178.7 133 64.7
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 1.4e-42 178.7 131 63.4
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 3.0e-42 177.6 129 66.7
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 3.0e-42 177.6 124 71.8
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 3.0e-42 177.6 131 64.1
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 4.0e-42 177.2 127 66.1
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 5.2e-42 176.8 127 66.9
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 8.8e-42 176.0 135 61.5
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 8.8e-42 176.0 131 62.6
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 8.8e-42 176.0 129 64.3
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 1.5e-41 175.3 133 63.9
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 2.0e-41 174.9 127 66.9
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 2.0e-41 174.9 127 65.4
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 2.0e-41 174.9 127 65.4
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 2.6e-41 174.5 133 63.9
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 3.4e-41 174.1 127 64.6
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 4.4e-41 173.7 130 62.3
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 5.7e-41 173.3 130 60.8
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 9.8e-41 172.6 131 64.9
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.3e-40 172.2 127 66.1
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.7e-40 171.8 127 65.4
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.7e-40 171.8 129 66.7
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 2.2e-40 171.4 130 60.0
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 2.8e-40 171.0 115 72.2
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 3.7e-40 170.6 129 66.7
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 6.3e-40 169.9 127 63.8
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 6.3e-40 169.9 127 63.8
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 9.1e-39 166.0 122 63.9
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 9.1e-39 166.0 122 63.9
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 9.1e-39 166.0 122 63.9
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 9.1e-39 166.0 128 60.9
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 3.5e-38 164.1 132 56.8
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 1.0e-37 162.5 154 53.2
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 2.9e-37 161.0 134 60.4
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.5e-36 158.7 119 62.2
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.9e-36 158.3 115 65.2
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 2.5e-36 157.9 170 50.0
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 5.5e-36 156.8 122 58.2
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 7.2e-36 156.4 126 60.3
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 3.6e-35 154.1 126 61.1
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 1.0e-34 152.5 110 65.5
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 3.0e-34 151.0 132 53.0
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 3.7e-32 144.1 104 64.4
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 3.7e-32 144.1 104 64.4
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 1.4e-31 142.1 119 59.7
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 7.0e-31 139.8 126 57.9
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 4.7e-27 127.1 117 51.3
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 8.0e-27 126.3 132 47.0
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 4.0e-26 124.0 94 63.8
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 4.4e-25 120.6 102 54.9
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 7.5e-25 119.8 124 50.8
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.2e-24 118.2 83 67.5
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 8.3e-24 116.3 92 57.6
Medtr1g085900 Medicago truncatula HOM05D006081 ORTHO05D007628 2.0e-22 111.7 103 58.3
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 1.7e-21 108.6 138 42.8
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 4.3e-20 104.0 110 54.5
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 6.2e-19 100.1 131 45.0
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 3.1e-18 97.8 63 71.4
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 6.8e-18 96.7 66 68.2
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 3.2e-15 87.8 120 38.3
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 2.0e-14 85.1 132 40.2
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.1e-12 79.3 109 38.5
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 8.9e-10 69.7 115 33.0
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 7.5e-09 66.6 38 81.6
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 9.8e-09 66.2 39 74.4
TPR.G36744 Trifolium pratense HOM05D033735 ORTHO05D007628 1.3e-08 65.9 41 78.0
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 1.2e-06 59.3 50 60.0
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 6.0e-06 57.0 40 62.5
TPR.G31053 Trifolium pratense HOM05D033735 ORTHO05D410983 7.8e-06 56.6 45 62.2


User provided reference genes

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