Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 6.8e-84 313.9 156 100.0
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 1.8e-76 289.3 156 92.9
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 8.4e-74 280.4 156 86.5
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 4.6e-72 274.6 156 89.1
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 4.2e-65 251.5 161 79.5
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 6.0e-64 247.7 160 77.5
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 1.0e-63 246.9 166 75.9
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 1.7e-63 246.1 166 75.9
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 2.3e-63 245.7 158 77.8
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 9.6e-62 240.4 164 71.3
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 1.2e-59 233.4 167 74.3
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 3.4e-59 231.9 167 73.7
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 1.7e-58 229.6 164 68.9
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 4.6e-56 221.5 158 71.5
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 3.9e-55 218.4 155 72.3
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 8.7e-55 217.2 156 70.5
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 1.5e-54 216.5 159 71.7
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.5e-54 216.5 157 70.7
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 1.5e-54 216.5 153 71.2
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 2.5e-54 215.7 158 68.4
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.5e-54 215.7 153 71.2
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.3e-53 213.4 158 69.6
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.6e-53 213.0 158 69.6
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 2.1e-53 212.6 157 69.4
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 4.8e-53 211.5 162 69.1
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 6.2e-53 211.1 153 68.0
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 6.2e-53 211.1 160 68.8
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 6.2e-53 211.1 156 69.9
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.2e-53 211.1 158 68.4
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 8.1e-53 210.7 161 65.8
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 1.1e-52 210.3 122 81.1
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 1.1e-52 210.3 158 68.4
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 1.4e-52 209.9 161 67.1
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.4e-52 209.9 161 65.2
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.8e-52 209.5 155 67.7
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 2.4e-52 209.1 161 65.2
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.4e-52 209.1 153 66.7
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 2.4e-52 209.1 161 66.5
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 2.4e-52 209.1 163 64.4
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 3.1e-52 208.8 159 67.9
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 4.0e-52 208.4 160 62.5
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 5.3e-52 208.0 156 67.9
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 6.9e-52 207.6 156 66.7
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 6.9e-52 207.6 157 66.2
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 1.5e-51 206.5 162 64.8
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 2.0e-51 206.1 122 77.9
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.0e-51 206.1 155 66.5
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 2.0e-51 206.1 159 66.0
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 2.6e-51 205.7 162 64.2
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.4e-51 205.3 162 65.4
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.5e-51 204.9 158 65.2
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.5e-51 204.9 162 64.8
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 4.5e-51 204.9 118 80.5
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.5e-51 204.9 161 67.1
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 5.8e-51 204.5 155 68.4
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 5.8e-51 204.5 118 79.7
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 5.8e-51 204.5 118 79.7
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 7.6e-51 204.1 154 63.6
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 1.3e-50 203.4 154 68.8
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.7e-50 203.0 155 67.7
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 3.8e-50 201.8 153 68.0
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 3.8e-50 201.8 153 68.0
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.8e-50 201.8 164 64.6
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 3.8e-50 201.8 156 66.0
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 4.9e-50 201.4 157 64.3
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 4.9e-50 201.4 158 63.3
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 6.4e-50 201.1 152 65.8
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 6.4e-50 201.1 157 63.1
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 8.4e-50 200.7 152 65.8
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 8.4e-50 200.7 159 64.8
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 8.4e-50 200.7 130 72.3
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.1e-49 200.3 150 64.0
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.4e-49 199.9 159 63.5
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 1.4e-49 199.9 155 63.2
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 1.9e-49 199.5 161 64.0
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 5.5e-49 198.0 153 64.1
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 5.5e-49 198.0 155 61.9
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 7.1e-49 197.6 131 67.9
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 1.2e-48 196.8 159 64.8
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 1.2e-48 196.8 133 69.2
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 2.1e-48 196.1 158 63.3
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 2.1e-48 196.1 158 63.3
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 2.1e-48 196.1 163 62.6
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 2.1e-48 196.1 122 73.0
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 2.7e-48 195.7 156 65.4
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 3.5e-48 195.3 155 65.2
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 3.5e-48 195.3 155 63.9
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.5e-48 195.3 163 62.0
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.5e-48 195.3 163 62.0
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 3.5e-48 195.3 161 62.7
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 4.6e-48 194.9 157 63.1
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 4.6e-48 194.9 157 63.1
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 6.0e-48 194.5 165 61.8
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 7.9e-48 194.1 158 64.6
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 7.9e-48 194.1 165 60.0
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.3e-47 193.4 157 62.4
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.3e-47 193.4 157 63.7
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 3.0e-47 192.2 149 63.1
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 1.1e-46 190.3 157 61.1
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.9e-46 189.5 163 58.9
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 4.3e-46 188.3 157 59.2
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 6.2e-45 184.5 155 60.6
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 1.8e-44 183.0 156 60.3
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 5.3e-44 181.4 142 69.0
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 2.2e-42 176.0 117 70.9
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 3.8e-42 175.3 116 69.0
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 6.5e-42 174.5 163 57.1
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 1.2e-40 170.2 140 60.7
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.5e-38 163.3 151 55.0
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 2.6e-35 152.5 91 76.9
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 5.9e-35 151.4 160 47.5
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 2.1e-32 142.9 159 45.9
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.7e-29 133.3 124 48.4
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 6.3e-29 131.3 74 73.0
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 2.4e-28 129.4 82 76.8
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 1.2e-24 117.1 92 62.0
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 1.6e-24 116.7 89 62.9
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 4.7e-24 115.2 103 58.3
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 2.1e-16 89.7 91 53.8
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 5.2e-15 85.1 122 36.9
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 2.8e-13 79.3 51 68.6
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 6.3e-13 78.2 51 70.6
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 8.2e-13 77.8 122 33.6
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 5.0e-10 68.6 164 39.6
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.9e-09 66.6 131 32.1


User provided reference genes

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