Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.7e-160 569.3 292 100.0
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 3.4e-137 491.9 293 88.7
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 8.4e-136 487.3 305 85.2
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 4.6e-126 454.9 300 81.0
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 5.3e-122 441.4 301 76.7
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 4.5e-121 438.3 303 76.6
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 2.2e-120 436.0 298 76.8
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 6.9e-114 414.5 308 73.1
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 4.2e-111 405.2 262 84.4
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 3.1e-106 389.0 292 68.8
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 4.5e-105 385.2 244 75.8
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 5.9e-105 384.8 289 71.6
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.0e-104 384.0 277 69.7
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 2.9e-104 382.5 290 69.3
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 3.8e-104 382.1 255 73.7
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 3.8e-104 382.1 285 70.2
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 6.5e-104 381.3 264 72.0
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 6.5e-104 381.3 290 68.3
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 8.5e-104 380.9 287 69.0
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 8.5e-104 380.9 248 73.8
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 1.9e-103 379.8 285 67.4
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 4.2e-103 378.6 286 67.1
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 7.2e-103 377.9 286 66.4
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 9.4e-103 377.5 285 67.0
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.6e-102 376.7 265 70.6
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 6.1e-102 374.8 265 71.3
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 1.4e-101 373.6 268 70.1
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 6.7e-101 371.3 294 65.3
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 6.7e-101 371.3 268 71.3
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.1e-100 370.5 287 67.9
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 2.0e-100 369.8 261 71.3
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 3.3e-100 369.0 294 65.6
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 4.4e-100 368.6 254 72.8
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 4.4e-100 368.6 259 71.0
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 4.4e-100 368.6 274 69.3
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 9.7e-100 367.5 247 73.3
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 9.7e-100 367.5 253 71.1
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 1.7e-99 366.7 264 69.3
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 1.7e-99 366.7 294 65.6
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.2e-99 366.3 292 67.5
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 2.8e-99 365.9 285 67.0
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 3.7e-99 365.5 293 64.5
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.7e-99 365.5 292 67.5
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 1.1e-98 364.0 283 66.8
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 1.8e-98 363.2 291 66.0
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 1.8e-98 363.2 260 72.3
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 3.1e-98 362.5 257 70.0
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.1e-98 362.1 254 73.6
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 7.0e-98 361.3 264 68.6
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 9.1e-98 360.9 292 65.8
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 5.9e-97 358.2 241 72.6
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 1.0e-96 357.5 283 65.4
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.3e-96 357.1 279 68.1
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 3.8e-96 355.5 269 68.0
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 3.8e-96 355.5 265 69.1
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 1.1e-95 354.0 269 68.0
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 1.1e-95 354.0 244 72.5
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 1.5e-95 353.6 269 68.0
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 2.5e-95 352.8 286 64.3
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 5.5e-95 351.7 252 74.6
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 7.2e-95 351.3 253 70.0
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 9.4e-95 350.9 286 64.3
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.1e-94 349.7 262 67.9
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 8.0e-94 347.8 253 69.2
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.4e-93 347.1 271 67.5
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 2.3e-93 346.3 255 70.6
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.3e-93 346.3 292 61.3
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 2.3e-93 346.3 292 61.3
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 2.3e-93 346.3 261 67.4
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 4.0e-93 345.5 271 66.4
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 1.2e-92 344.0 253 69.2
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 3.4e-92 342.4 253 68.0
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 7.5e-92 341.3 258 69.4
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.1e-90 337.4 272 65.4
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.1e-90 337.4 268 66.8
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.8e-90 336.7 248 70.2
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 2.4e-90 336.3 269 64.3
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 2.7e-89 332.8 282 60.6
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 3.5e-89 332.4 241 69.7
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.3e-88 330.5 255 66.7
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.5e-87 327.0 227 72.2
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 4.2e-87 325.5 262 67.2
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 1.2e-86 323.9 260 65.8
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 1.2e-86 323.9 254 68.5
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 2.1e-86 323.2 272 62.9
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 2.6e-84 316.2 256 64.5
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 7.5e-84 314.7 270 61.9
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 8.3e-83 311.2 245 63.3
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 3.1e-82 309.3 257 62.3
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 4.5e-81 305.4 195 76.9
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 5.6e-79 298.5 265 60.4
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 1.6e-78 297.0 225 64.0
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 3.0e-77 292.7 229 65.9
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 7.0e-74 281.6 258 57.8
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 2.1e-70 270.0 187 72.2
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 2.7e-65 253.1 262 55.0
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 1.9e-63 246.9 232 53.9
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 9.8e-60 234.6 233 51.5
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.3e-56 224.2 292 49.3
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 9.5e-55 218.0 227 47.1
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 3.0e-48 196.4 138 69.6
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 3.5e-41 172.9 244 39.8
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 5.1e-40 169.1 232 39.2
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 2.6e-36 156.8 246 41.1
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 9.9e-36 154.8 244 38.1
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 6.7e-32 142.1 91 72.5
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.8e-30 136.7 267 38.6
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 6.7e-24 115.5 84 64.3
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 9.0e-21 105.1 108 50.0
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.3e-16 91.3 51 84.3
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 2.1e-14 84.0 61 65.6
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 2.8e-14 83.6 103 51.5
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 5.9e-12 75.9 54 63.0
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 2.7e-09 67.0 75 50.7
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 2.7e-09 67.0 75 50.7
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 7.9e-09 65.5 75 49.3
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 2.3e-08 63.9 87 40.2


User provided reference genes

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