Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 8.3e-71 270.4 149 100.0
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 3.8e-60 235.0 151 88.7
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.2e-56 223.4 153 86.3
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 4.7e-50 201.4 145 80.0
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 1.3e-47 193.4 138 77.5
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 2.0e-45 186.0 152 73.7
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 2.1e-42 176.0 116 82.8
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 1.4e-41 173.3 158 69.0
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 5.2e-41 171.4 150 66.7
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 2.6e-40 169.1 150 66.0
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 2.6e-40 169.1 134 71.6
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 1.1e-38 163.7 121 72.7
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.6e-37 159.8 122 70.5
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 6.0e-37 157.9 124 70.2
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 3.0e-36 155.6 125 70.4
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 5.1e-36 154.8 121 75.2
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 1.5e-35 153.3 124 67.7
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.9e-35 152.9 115 73.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.9e-35 152.9 115 73.0
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 3.3e-35 152.1 133 63.9
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 5.6e-35 151.4 130 66.2
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 1.2e-34 150.2 124 66.9
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.6e-34 149.8 125 66.4
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 2.1e-34 149.4 124 69.4
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.8e-34 149.1 136 63.2
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 6.2e-34 147.9 125 67.2
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.1e-33 147.1 124 65.3
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 1.1e-33 147.1 128 67.2
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.4e-33 146.7 130 64.6
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 1.8e-33 146.4 116 71.6
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 2.4e-33 146.0 147 63.3
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 3.1e-33 145.6 122 66.4
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 4.0e-33 145.2 125 64.0
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 5.2e-33 144.8 126 66.7
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 5.2e-33 144.8 110 71.8
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 6.8e-33 144.4 114 67.5
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 8.9e-33 144.1 125 63.2
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 1.2e-32 143.7 103 79.6
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 7.6e-32 141.0 130 61.5
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 1.3e-31 140.2 122 64.8
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 1.3e-31 140.2 119 68.9
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.7e-31 139.8 125 63.2
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.7e-31 139.8 125 63.2
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 2.9e-31 139.0 128 64.8
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 4.9e-31 138.3 122 64.8
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 8.4e-31 137.5 100 74.0
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.1e-30 137.1 134 61.9
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 2.4e-30 136.0 113 67.3
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 3.2e-30 135.6 115 64.3
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 4.1e-30 135.2 111 67.6
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 5.4e-30 134.8 119 65.5
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 7.1e-30 134.4 121 63.6
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 2.1e-29 132.9 124 62.9
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 4.6e-29 131.7 124 62.1
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 2.3e-28 129.4 117 64.1
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 3.0e-28 129.0 164 51.2
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.1e-27 127.1 110 61.8
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 1.1e-27 127.1 107 68.2
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.9e-27 126.3 142 54.2
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 9.6e-27 124.0 110 60.9
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 2.8e-26 122.5 131 54.2
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 2.8e-26 122.5 134 56.7
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.8e-26 122.5 114 60.5
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 2.8e-26 122.5 113 60.2
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 8.1e-26 120.9 87 81.6
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.1e-25 120.6 128 57.0
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 1.8e-25 119.8 159 49.7
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 4.0e-25 118.6 109 64.2
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 6.9e-25 117.9 112 59.8
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 9.0e-25 117.5 111 63.1
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 9.0e-25 117.5 114 57.0
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.5e-24 116.7 117 59.0
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 1.5e-24 116.7 115 60.9
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 1.5e-24 116.7 115 60.9
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 2.0e-24 116.3 131 51.9
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 2.6e-24 115.9 112 59.8
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 2.6e-24 115.9 112 59.8
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 2.6e-24 115.9 112 59.8
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 3.4e-24 115.5 113 57.5
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 3.4e-24 115.5 108 61.1
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 4.4e-24 115.2 111 59.5
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 5.8e-24 114.8 119 55.5
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 5.8e-24 114.8 112 58.9
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 5.8e-24 114.8 123 55.3
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 1.3e-23 113.6 112 58.9
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 2.4e-22 109.4 98 64.3
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 2.7e-21 105.9 92 62.0
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 1.3e-20 103.6 66 80.3
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 1.7e-20 103.2 75 72.0
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 2.3e-20 102.8 126 50.8
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 2.3e-20 102.8 69 76.8
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 3.0e-20 102.4 95 58.9
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.9e-20 102.1 107 54.2
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 8.7e-20 100.9 79 67.1
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 1.5e-19 100.1 86 60.5
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 1.5e-19 100.1 93 63.4
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 7.3e-19 97.8 85 62.4
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 1.6e-18 96.7 72 69.4
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 1.4e-17 93.6 114 50.0
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 5.3e-17 91.7 81 61.7
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.5e-16 90.1 78 60.3
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 3.4e-16 89.0 70 67.1
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 4.6e-13 78.6 80 62.5
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 3.9e-12 75.5 114 50.9
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 3.9e-12 75.5 114 50.9
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 8.7e-12 74.3 75 57.3
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.5e-11 72.8 46 76.1
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 5.6e-11 71.6 107 41.1
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 9.6e-11 70.9 59 59.3
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 2.1e-10 69.7 45 77.8
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 4.8e-10 68.6 105 40.0
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 6.9e-09 64.7 52 69.2
arahy.Tifrunner.gnm1.ann1.N1ZXMW Arachis hypogaea HOM05D006869 ORTHO05D008641 2.4e-06 56.2 46 67.4


User provided reference genes

Program Settings