Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26609 Trifolium pratense HOM05D010689 ORTHO05D012855 1.9e-77 292.4 142 100.0
Psat1g009320 Pisum sativum HOM05D010689 ORTHO05D012855 1.0e-57 226.9 144 82.6
Ca_03398_v3 Cicer arietinum L. HOM05D010689 ORTHO05D012855 3.4e-42 175.3 146 70.5
Phvul.005G061801 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 1.6e-39 166.4 146 63.7
Glyma.15G247800 Glycine max HOM05D010689 ORTHO05D012855 3.6e-39 165.2 146 65.8
Glyma.13G260100 Glycine max HOM05D010689 ORTHO05D012855 1.5e-37 159.8 148 62.8
Glyma.15G247900 Glycine max HOM05D010689 ORTHO05D012855 1.5e-37 159.8 137 67.9
Glyma.13G260401 Glycine max HOM05D010689 ORTHO05D012855 2.0e-37 159.5 146 63.7
Lalb_Chr01g0016121 Lupinus albus HOM05D010689 ORTHO05D012855 4.4e-37 158.3 140 63.6
Phvul.005G062100 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 4.4e-37 158.3 146 61.0
Phvul.005G061900 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 1.8e-35 152.9 148 59.5
VMungo1080G1305 Vigna mungo HOM05D010689 ORTHO05D012855 7.7e-34 147.5 143 59.4
Lj3g0005793 Lotus japonicus HOM05D010689 ORTHO05D012855 1.0e-33 147.1 148 60.1
Phvul.005G061700 Phaseolus vulgaris HOM05D010689 ORTHO05D012855 2.9e-33 145.6 135 58.5
Lalb_Chr25g0285471 Lupinus albus HOM05D010689 ORTHO05D012855 1.1e-32 143.7 137 62.8
Glyma.15G247700 Glycine max HOM05D010689 ORTHO05D012855 3.2e-32 142.1 146 58.9
Glyma.13G260200 Glycine max HOM05D010689 ORTHO05D012855 2.4e-19 99.4 88 58.0
VMungo1080G0147 Vigna mungo HOM05D010689 ORTHO05D012855 4.0e-14 82.0 60 63.3
Lalb_Chr20g0108981 Lupinus albus HOM05D010689 ORTHO05D012855 4.9e-12 75.1 76 57.9
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 2.7e-10 69.3 140 35.0
Medtr2g071800 Medicago truncatula HOM05D010689 ORTHO05D012855 2.7e-10 69.3 46 71.7
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 2.9e-09 65.9 112 38.4
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 6.6e-09 64.7 136 35.3
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 8.6e-09 64.3 148 33.8
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 4.3e-08 62.0 131 35.1
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.6e-07 60.1 148 32.4
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 2.8e-07 59.3 146 34.9
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 6.1e-07 58.2 144 31.2
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 8.0e-07 57.8 134 35.8
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 1.0e-06 57.4 143 35.7
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 2.3e-06 56.2 101 34.7
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 3.0e-06 55.8 150 32.0
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 3.0e-06 55.8 142 34.5
Gorai.002G040500 Gossypium raimondii HOM05D008142 ORTHO05D009674 8.9e-06 54.3 123 30.9


User provided reference genes

Program Settings