Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 6.1e-266 920.2 457 100.0
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 1.3e-255 885.9 456 95.4
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 1.7e-255 885.6 457 95.6
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 1.8e-238 828.9 459 90.0
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 2.7e-237 825.1 458 88.6
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 2.3e-236 822.0 458 88.4
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 6.2e-234 813.9 458 87.3
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 6.6e-228 793.9 457 84.7
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 6.6e-220 767.3 461 82.9
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 3.6e-218 761.5 455 83.3
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.1e-211 740.0 458 78.8
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.2e-210 736.5 453 79.2
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 4.9e-207 724.5 457 77.2
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 3.2e-206 721.8 457 77.5
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 4.2e-206 721.5 456 77.6
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 2.7e-205 718.8 457 77.7
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 4.6e-205 718.0 455 78.5
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 7.8e-205 717.2 451 77.6
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 7.8e-205 717.2 451 77.4
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 1.0e-204 716.8 457 77.5
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 3.0e-204 715.3 455 77.8
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 6.6e-204 714.1 451 76.7
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 3.3e-203 711.8 455 76.7
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 5.6e-203 711.1 456 76.8
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 7.3e-203 710.7 454 76.9
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 9.6e-203 710.3 438 79.0
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.6e-202 709.5 455 76.5
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 6.2e-202 707.6 452 76.8
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 8.1e-202 707.2 454 76.0
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 1.8e-201 706.1 467 74.5
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 3.1e-201 705.3 454 74.7
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 5.3e-201 704.5 455 77.6
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 1.2e-200 703.4 449 74.4
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.0e-200 702.6 441 78.2
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 5.8e-200 701.0 436 77.5
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 5.8e-200 701.0 451 74.1
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 9.9e-200 700.3 455 75.2
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 9.9e-200 700.3 456 76.5
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 1.3e-199 699.9 451 76.1
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 3.8e-199 698.4 431 77.5
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 6.4e-199 697.6 455 74.3
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 6.4e-199 697.6 451 73.8
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 6.4e-199 697.6 452 77.2
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 8.4e-199 697.2 449 75.7
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 2.4e-198 695.7 446 75.6
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.4e-198 695.7 455 74.7
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 5.4e-198 694.5 436 76.8
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 5.4e-198 694.5 438 77.4
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 2.1e-197 692.6 457 75.5
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.7e-197 692.2 442 77.4
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 2.7e-197 692.2 488 70.5
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 3.5e-197 691.8 417 79.9
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 4.6e-197 691.4 453 75.3
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 6.0e-197 691.0 449 75.3
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 1.3e-196 689.9 451 74.1
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 1.8e-196 689.5 435 76.6
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 1.8e-196 689.5 477 74.2
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 1.8e-196 689.5 436 76.4
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 1.1e-195 686.8 457 72.2
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 3.3e-195 685.3 451 72.9
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 5.6e-195 684.5 470 70.4
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 7.4e-195 684.1 457 73.1
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 1.3e-194 683.3 451 72.5
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.1e-193 680.2 451 72.1
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 1.4e-193 679.9 462 71.6
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.4e-193 679.1 458 72.3
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 3.1e-193 678.7 452 73.0
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 4.0e-193 678.3 473 70.2
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 6.9e-193 677.6 434 77.2
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 2.6e-192 675.6 451 72.1
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 2.6e-192 675.6 438 73.7
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 3.4e-192 675.2 451 72.3
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 3.4e-192 675.2 455 71.6
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 5.8e-192 674.5 451 74.9
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 1.3e-191 673.3 459 70.4
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 4.9e-191 671.4 451 70.5
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 1.1e-190 670.2 471 69.2
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 2.4e-190 669.1 480 68.3
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 2.1e-189 666.0 451 72.7
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 2.7e-189 665.6 451 72.3
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 7.9e-189 664.1 457 72.0
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 2.5e-187 659.1 457 71.8
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 7.4e-187 657.5 451 71.2
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 6.2e-186 654.4 461 70.3
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.1e-185 653.7 444 72.1
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 4.0e-185 651.7 457 71.1
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 4.0e-185 651.7 457 73.3
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.5e-184 649.8 483 68.9
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 3.0e-180 635.6 430 68.6
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 1.9e-179 632.9 503 66.6
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.3e-178 630.2 465 68.4
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 9.0e-177 624.0 410 75.4
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 3.4e-176 622.1 403 74.2
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 1.3e-175 620.2 415 72.0
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 2.2e-175 619.4 451 67.4
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 5.0e-175 618.2 486 63.4
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 6.3e-170 601.3 388 72.9
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 4.1e-169 598.6 409 71.9
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 1.0e-167 594.0 447 66.4
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 6.5e-167 591.3 470 65.5
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.8e-164 583.2 363 77.4
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 2.6e-163 579.3 451 65.4
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 7.4e-163 577.8 451 65.0
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.4e-156 557.0 427 63.2
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 1.2e-152 543.9 426 60.6
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 7.2e-150 534.6 279 92.8
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 4.7e-149 531.9 431 58.0
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 2.6e-147 526.2 429 59.7
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.1e-145 520.8 322 78.0
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.7e-144 516.2 434 56.2
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 4.7e-133 478.8 457 58.2
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.5e-118 430.6 451 54.8
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 3.7e-114 416.0 434 46.1
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 1.4e-105 387.5 425 47.5
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 7.8e-96 355.1 315 60.0
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 5.6e-94 349.0 367 54.0
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 9.3e-89 331.6 188 88.8
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.5e-83 314.3 484 36.2
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 4.2e-81 306.2 177 78.5
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 2.1e-56 224.2 345 40.9
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 2.7e-56 223.8 372 40.1
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.3e-50 204.9 108 84.3
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 1.0e-42 178.7 128 76.6
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 1.0e-39 168.7 124 69.4
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 5.7e-38 162.9 390 33.3
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 5.9e-35 152.9 137 56.9
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 4.7e-32 143.3 105 67.6
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 3.1e-28 130.6 85 65.9
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 5.5e-25 119.8 126 47.6
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 2.0e-22 111.3 67 71.6
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 4.1e-20 103.6 189 31.2
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 2.0e-19 101.3 76 63.2
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 2.0e-19 101.3 66 72.7
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 2.7e-19 100.9 82 58.5
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 1.9e-17 94.7 145 43.4
Duzib268G0110 Durio zibethinus HOM05D005577 ORTHO05D006941 1.0e-15 89.0 105 52.4
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.8e-15 88.2 70 61.4
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 2.8e-13 80.9 57 71.9
VMungo0720G2142 Vigna mungo HOM05D008589 ORTHO05D010715 4.4e-06 57.0 36 75.0


User provided reference genes

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