Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26566 Trifolium pratense HOM05D007431 ORTHO05D008438 3.6e-140 501.9 316 100.0
Medtr1g016270 Medicago truncatula HOM05D007431 ORTHO05D008438 3.5e-55 219.5 283 56.5
Psat6g020440 Pisum sativum HOM05D007431 ORTHO05D008438 6.7e-38 162.2 301 43.5
Ca_13166_v3 Cicer arietinum L. HOM05D007431 ORTHO05D008438 1.2e-34 151.4 330 39.1
Medtr8g097140 Medicago truncatula HOM05D007431 ORTHO05D008438 8.0e-31 138.7 306 41.8
Glyma.14G094600 Glycine max HOM05D007431 ORTHO05D008438 1.5e-29 134.4 346 36.4
Lj5g0005730 Lotus japonicus HOM05D007431 ORTHO05D008438 1.1e-27 128.3 306 36.9
Phvul.001G035300 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 1.3e-25 121.3 352 34.4
Glyma.17G228900 Glycine max HOM05D007431 ORTHO05D008438 4.2e-24 116.3 345 34.5
VMungo0647G2370 Vigna mungo HOM05D007431 ORTHO05D008438 4.7e-23 112.8 336 35.4
Lalb_Chr24g0399681 Lupinus albus HOM05D007431 ORTHO05D008438 1.6e-18 97.8 195 42.1
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 5.9e-18 95.9 257 37.7
Lalb_Chr22g0356011 Lupinus albus HOM05D007431 ORTHO05D008438 1.0e-17 95.1 193 40.4
Phvul.001G035400 Phaseolus vulgaris HOM05D007431 ORTHO05D008438 3.2e-16 90.1 162 42.0
Thecc.03G012200 Theobroma cacao HOM05D007431 ORTHO05D008438 8.8e-14 82.0 134 44.0
arahy.Tifrunner.gnm1.ann1.C9XA4X Arachis hypogaea HOM05D007431 ORTHO05D008438 1.2e-13 81.6 158 44.9
Thecc.09G259600 Theobroma cacao HOM05D007431 ORTHO05D008438 7.5e-13 79.0 147 44.2
TPR.G22041 Trifolium pratense HOM05D007431 ORTHO05D008438 4.9e-12 76.3 131 44.3
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 2.4e-11 73.9 79 48.1
Atru.chr3.3765 Acer truncatum HOM05D007431 ORTHO05D008438 5.4e-11 72.8 142 38.7
Psat2g042560 Pisum sativum HOM05D007431 ORTHO05D008438 7.0e-11 72.4 56 71.4
Sed0011387 Sechium edule HOM05D007431 ORTHO05D008438 1.6e-10 71.2 72 55.6
Dinv06340 Davidia involucrata HOM05D007431 ORTHO05D008438 2.7e-10 70.5 158 37.3
TAR623G0663 Trochodendron aralioides HOM05D007431 ORTHO05D008438 3.5e-10 70.1 62 58.1
Aa31LG4G15040 Aethionema arabicum HOM05D007431 ORTHO05D008438 4.5e-10 69.7 76 51.3
Gohir.A03G036200 Gossypium hirsutum HOM05D007431 ORTHO05D008438 4.5e-10 69.7 167 40.1
Duzib168G1071 Durio zibethinus HOM05D007431 ORTHO05D008438 5.9e-10 69.3 64 54.7
Potri.019G095600 Populus trichocarpa HOM05D007431 ORTHO05D008438 5.9e-10 69.3 145 34.5
CANSAT11G1515 Cannabis sativa HOM05D007431 ORTHO05D008438 2.9e-09 67.0 85 49.4
CSS0032205 Camellia sinensis var. sinensis HOM05D007431 ORTHO05D008438 3.8e-09 66.6 70 48.6
Sed0003904 Sechium edule HOM05D007431 ORTHO05D008438 5.0e-09 66.2 278 28.1
THA.LOC104810823 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 5.0e-09 66.2 128 39.1
BolC3t13774H Brassica oleracea HOM05D007431 ORTHO05D008438 6.6e-09 65.9 129 38.8
Cpa.g.sc139.17 Carica papaya HOM05D007431 ORTHO05D008438 8.6e-09 65.5 188 34.0
Gohir.D03G132100 Gossypium hirsutum HOM05D007431 ORTHO05D008438 8.6e-09 65.5 180 34.4
RhsimUnG0043300 Rhododendron simsii HOM05D002794 ORTHO05D008438 8.6e-09 65.5 90 42.2
AT5G60030 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 1.5e-08 64.7 124 37.1
A03p11360 Brassica napus HOM05D007431 ORTHO05D008438 1.5e-08 64.7 89 42.7
AT1G75335 Arabidopsis thaliana HOM05D007431 ORTHO05D008438 1.9e-08 64.3 59 54.2
Ciclev10028956m.g Citrus clementina HOM05D007431 ORTHO05D008438 1.9e-08 64.3 70 52.9
TAR369G0100 Trochodendron aralioides HOM05D007431 ORTHO05D008438 2.5e-08 63.9 99 37.4
Actinidia00802 Actinidia chinensis HOM05D007431 ORTHO05D008438 3.3e-08 63.5 67 50.7
BraA03t10450Z Brassica rapa HOM05D007431 ORTHO05D008438 3.3e-08 63.5 90 42.2
Gorai.003G139000 Gossypium raimondii HOM05D007431 ORTHO05D008438 3.3e-08 63.5 180 33.9
Lsat_1_v5_gn_2_80021 Lactuca sativa HOM05D007431 ORTHO05D008438 3.3e-08 63.5 73 52.1
Nn2g12944 Nelumbo nucifera HOM05D007431 ORTHO05D008438 3.3e-08 63.5 157 36.3
AUR62034380 Chenopodium quinoa HOM05D007431 ORTHO05D008438 4.2e-08 63.2 154 34.4
Ah.15g096430 Amaranthus hybridus HOM05D007431 ORTHO05D008438 5.6e-08 62.8 144 34.7
A02p06640 Brassica napus HOM05D007431 ORTHO05D008438 5.6e-08 62.8 59 55.9
C02p11930 Brassica napus HOM05D007431 ORTHO05D008438 5.6e-08 62.8 59 55.9
BraA02t05746Z Brassica rapa HOM05D007431 ORTHO05D008438 5.6e-08 62.8 59 55.9
DCAR_003389 Daucus carota HOM05D007431 ORTHO05D008438 5.6e-08 62.8 141 30.5
Hma1.2p1_0321F.1_g124100 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 5.6e-08 62.8 130 39.2
HanXRQChr14g0439961 Helianthus annuus HOM05D007431 ORTHO05D008438 7.2e-08 62.4 98 43.9
Sc12g0001910 Simmondsia chinensis HOM05D007431 ORTHO05D008438 7.2e-08 62.4 158 38.0
AL8G36620 Arabidopsis lyrata HOM05D007431 ORTHO05D008438 9.5e-08 62.0 143 33.6
BolC2t07290H Brassica oleracea HOM05D007431 ORTHO05D008438 1.6e-07 61.2 62 51.6
Carub.0008s2073 Capsella rubella HOM05D007431 ORTHO05D008438 1.6e-07 61.2 59 52.5
ClCG02G020690 Citrullus lanatus HOM05D021867 ORTHO05D008438 1.6e-07 61.2 302 27.5
MD11G1119300 Malus domestica HOM05D016629 ORTHO05D008438 1.6e-07 61.2 163 35.0
Sp6g21690 Schrenkiella parvula HOM05D007431 ORTHO05D008438 1.6e-07 61.2 62 48.4
Carub.0002s2217 Capsella rubella HOM05D007431 ORTHO05D008438 2.1e-07 60.8 59 50.8
DCAR_011227 Daucus carota HOM05D007431 ORTHO05D008438 2.1e-07 60.8 120 32.5
DCAR_011228 Daucus carota HOM05D007431 ORTHO05D008438 2.1e-07 60.8 120 32.5
BcaB05g22609 Brassica carinata HOM05D007431 ORTHO05D008438 2.8e-07 60.5 61 52.5
Hma1.2p1_0321F.1_g124110 Hydrangea macrophylla HOM05D007431 ORTHO05D008438 2.8e-07 60.5 66 51.5
Lj1P179T36 Lonicera japonica HOM05D007431 ORTHO05D008438 2.8e-07 60.5 69 44.9
QL01p035383 Quercus lobata HOM05D007431 ORTHO05D008438 2.8e-07 60.5 93 45.2
Potri.013G126701 Populus trichocarpa HOM05D007431 ORTHO05D008438 3.6e-07 60.1 102 36.3
Aa31LG1G12150 Aethionema arabicum HOM05D007431 ORTHO05D008438 6.1e-07 59.3 150 34.7
MBI15_g23248_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 6.1e-07 59.3 65 50.8
Sabra13G0105800 Salix brachista HOM05D007431 ORTHO05D008438 6.1e-07 59.3 70 45.7
PGR102G0834 Punica granatum HOM05D007431 ORTHO05D008438 8.0e-07 58.9 76 43.4
MELO3C025719.2 Cucumis melo HOM05D021867 ORTHO05D008438 1.0e-06 58.5 175 34.9
MBI11_g07544_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 1.4e-06 58.2 163 31.9
MBI18_g47623_MAGBIO Magnolia biondii HOM05D007431 ORTHO05D008438 2.3e-06 57.4 65 50.8
Sabra19G0107900 Salix brachista HOM05D007431 ORTHO05D008438 3.0e-06 57.0 151 33.8
THA.LOC104799471 Tarenaya hassleriana HOM05D007431 ORTHO05D008438 5.2e-06 56.2 178 32.0
CDE01G0792 Ceratophyllum demersum HOM05D007431 ORTHO05D008438 6.8e-06 55.8 90 33.3
Dinv32831 Davidia involucrata HOM05D001089 ORTHO05D008438 6.8e-06 55.8 153 33.3


User provided reference genes

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