Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 3.1e-93 345.1 175 100.0
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 6.6e-35 151.4 102 75.5
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 1.0e-32 144.1 110 68.2
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 5.8e-31 138.3 114 65.8
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 5.8e-31 138.3 117 64.1
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 1.3e-30 137.1 112 67.9
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 2.2e-30 136.3 96 70.8
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 4.9e-30 135.2 110 67.3
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 2.0e-28 129.8 109 64.2
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 2.7e-28 129.4 101 63.4
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 7.8e-28 127.9 108 62.0
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 1.7e-27 126.7 105 62.9
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 3.0e-27 125.9 107 60.7
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 6.6e-27 124.8 116 54.3
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 1.1e-24 117.5 109 56.9
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 1.4e-24 117.1 116 55.2
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 3.1e-24 115.9 106 55.7
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.1e-24 115.9 127 52.8
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 5.2e-24 115.2 108 54.6
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 6.8e-24 114.8 89 60.7
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 8.9e-24 114.4 117 54.7
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 8.9e-24 114.4 85 65.9
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.5e-23 113.6 118 55.9
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 2.0e-23 113.2 124 50.8
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 2.6e-23 112.8 92 59.8
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 2.6e-23 112.8 110 51.8
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 3.4e-23 112.5 114 53.5
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 5.8e-23 111.7 112 51.8
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 7.5e-23 111.3 99 57.6
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 7.5e-23 111.3 107 52.3
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 9.8e-23 110.9 123 50.4
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 9.8e-23 110.9 116 49.1
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 9.8e-23 110.9 94 60.6
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 9.8e-23 110.9 88 61.4
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 1.7e-22 110.2 103 54.4
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 1.7e-22 110.2 110 54.5
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 1.7e-22 110.2 118 51.7
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 2.2e-22 109.8 93 58.1
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 2.2e-22 109.8 113 52.2
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 2.9e-22 109.4 99 57.6
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 2.9e-22 109.4 99 57.6
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 6.4e-22 108.2 100 57.0
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 6.4e-22 108.2 99 56.6
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 6.4e-22 108.2 99 56.6
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 6.4e-22 108.2 99 56.6
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 6.4e-22 108.2 110 53.6
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 8.3e-22 107.8 124 49.2
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 8.3e-22 107.8 99 56.6
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 1.1e-21 107.5 108 55.6
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 1.1e-21 107.5 109 51.4
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 1.4e-21 107.1 100 56.0
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 1.9e-21 106.7 111 52.3
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 1.9e-21 106.7 120 46.7
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 2.4e-21 106.3 121 50.4
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 3.2e-21 105.9 103 50.5
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 5.4e-21 105.1 112 48.2
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 7.1e-21 104.8 100 55.0
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 7.1e-21 104.8 95 55.8
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 9.2e-21 104.4 128 45.3
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 1.2e-20 104.0 108 51.9
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 1.2e-20 104.0 131 45.8
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 1.2e-20 104.0 122 45.1
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 2.1e-20 103.2 99 53.5
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 2.7e-20 102.8 96 56.2
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 3.5e-20 102.4 99 49.5
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 4.6e-20 102.1 120 48.3
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 6.0e-20 101.7 99 52.5
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 6.0e-20 101.7 108 53.7
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 6.0e-20 101.7 109 51.4
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 6.0e-20 101.7 82 61.0
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 6.0e-20 101.7 91 54.9
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 7.8e-20 101.3 89 57.3
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 1.0e-19 100.9 116 49.1
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 1.0e-19 100.9 86 58.1
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 1.0e-19 100.9 115 50.4
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 1.3e-19 100.5 104 51.0
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 1.3e-19 100.5 101 52.5
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 1.3e-19 100.5 101 51.5
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 1.7e-19 100.1 85 58.8
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 1.7e-19 100.1 101 51.5
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 2.3e-19 99.8 95 52.6
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 3.0e-19 99.4 103 51.5
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 3.0e-19 99.4 125 47.2
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 5.1e-19 98.6 124 46.0
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 5.1e-19 98.6 95 55.8
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 6.6e-19 98.2 102 48.0
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 8.6e-19 97.8 85 55.3
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 8.6e-19 97.8 120 45.8
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 8.6e-19 97.8 121 48.8
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 1.9e-18 96.7 107 47.7
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 7.3e-18 94.7 116 46.6
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 7.3e-18 94.7 116 46.6
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 9.5e-18 94.4 92 53.3
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 1.2e-17 94.0 99 51.5
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 1.2e-17 94.0 87 55.2
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 2.1e-17 93.2 116 43.1
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 6.2e-17 91.7 127 40.2
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 8.1e-17 91.3 102 44.1
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 1.4e-16 90.5 107 47.7
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 4.0e-16 89.0 118 49.2
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 5.2e-16 88.6 120 48.3
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 1.5e-15 87.0 119 47.1
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 2.0e-15 86.7 93 43.0
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.7e-14 83.6 126 42.9
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.7e-14 83.6 126 42.9
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 1.1e-13 80.9 109 46.8
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 3.2e-13 79.3 88 48.9
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 5.4e-13 78.6 119 37.8
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 9.2e-13 77.8 62 58.1
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 1.3e-11 73.9 82 47.6
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 3.9e-11 72.4 73 46.6
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 7.3e-10 68.2 39 76.9
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 1.6e-09 67.0 56 57.1
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 2.8e-09 66.2 39 76.9
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 3.6e-09 65.9 94 40.4


User provided reference genes

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