Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.4e-111 406.4 223 100.0
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 7.2e-95 350.9 226 88.1
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 8.8e-93 344.0 229 86.9
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 5.7e-84 314.7 233 76.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 4.5e-81 305.1 232 75.4
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 3.6e-78 295.4 225 78.2
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.0e-77 293.9 225 77.8
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 5.2e-77 291.6 232 72.4
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 5.2e-77 291.6 229 73.8
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.3e-75 287.0 229 72.1
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.4e-74 283.5 229 71.6
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 4.5e-73 278.5 230 72.6
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 5.6e-71 271.6 237 68.4
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.2e-68 263.8 232 65.9
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.7e-67 260.0 237 65.0
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 3.7e-67 258.8 232 65.5
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 8.3e-67 257.7 228 65.4
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.8e-66 256.5 237 64.1
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 4.1e-66 255.4 234 66.2
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 4.1e-66 255.4 233 63.9
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 5.4e-66 255.0 234 64.5
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.2e-65 253.8 242 64.0
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 1.6e-65 253.4 254 61.8
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.7e-65 252.7 235 63.8
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 4.6e-65 251.9 239 61.9
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 7.8e-65 251.1 235 62.6
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 7.8e-65 251.1 230 63.0
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.7e-64 250.0 237 62.9
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.3e-64 249.6 231 63.2
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 3.0e-64 249.2 237 63.7
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 6.6e-64 248.1 241 62.7
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 8.6e-64 247.7 236 63.6
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.5e-63 246.9 240 62.5
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 1.9e-63 246.5 236 63.1
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 2.5e-63 246.1 232 63.4
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 3.3e-63 245.7 196 68.9
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 3.3e-63 245.7 230 64.3
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 4.3e-63 245.4 237 61.2
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 4.3e-63 245.4 231 63.6
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 7.3e-63 244.6 234 62.4
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.8e-62 242.7 167 82.0
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 6.2e-62 241.5 236 61.0
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 6.2e-62 241.5 232 62.5
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 8.0e-62 241.1 230 62.2
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.8e-61 240.0 214 63.1
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.8e-61 240.0 230 63.0
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.8e-61 240.0 193 66.3
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 3.1e-61 239.2 229 61.1
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.0e-61 238.8 223 64.1
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 4.0e-61 238.8 230 62.6
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.2e-60 237.3 223 63.7
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.2e-60 237.3 230 62.6
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.5e-60 236.9 223 63.7
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 2.0e-60 236.5 223 63.7
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 5.8e-60 235.0 232 61.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 7.5e-60 234.6 228 60.5
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 7.5e-60 234.6 202 66.8
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.3e-59 233.8 233 61.8
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.9e-59 231.9 233 60.1
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.9e-59 231.9 175 74.3
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 6.4e-59 231.5 192 65.6
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.4e-58 230.3 229 62.0
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.9e-58 229.9 227 62.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.2e-58 229.2 231 62.8
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 7.0e-58 228.0 236 58.9
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 9.2e-58 227.6 239 57.7
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.2e-57 227.3 233 59.7
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 3.5e-57 225.7 227 59.9
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 4.6e-57 225.3 226 59.3
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.0e-56 224.2 225 59.1
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 1.0e-56 224.2 226 58.4
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 5.0e-56 221.9 234 59.4
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 5.0e-56 221.9 235 59.1
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 7.3e-55 218.0 233 56.7
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 7.3e-55 218.0 253 55.3
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 7.3e-55 218.0 220 59.1
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 4.7e-54 215.3 222 58.1
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 6.2e-54 214.9 182 67.0
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.1e-53 214.2 224 58.5
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 1.4e-53 213.8 209 61.7
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.4e-53 213.8 220 58.6
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.8e-53 213.4 227 61.7
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.8e-53 213.4 250 55.6
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 2.3e-53 213.0 221 59.3
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 2.3e-53 213.0 220 57.7
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 4.0e-53 212.2 208 60.6
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 6.8e-53 211.5 214 59.8
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 6.8e-53 211.5 220 58.2
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 8.9e-53 211.1 171 67.3
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 2.0e-52 209.9 220 58.2
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 4.4e-52 208.8 229 57.2
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 4.4e-52 208.8 182 66.5
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 5.8e-52 208.4 237 57.4
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 7.5e-52 208.0 242 53.7
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 9.8e-52 207.6 182 65.4
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 2.9e-51 206.1 172 64.5
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 6.4e-51 204.9 216 58.3
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 8.3e-51 204.5 260 50.8
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.2e-49 200.7 162 68.5
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 1.6e-49 200.3 230 55.2
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 6.6e-48 194.9 175 64.0
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 6.6e-48 194.9 170 61.8
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 8.6e-48 194.5 233 55.4
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.1e-47 194.1 220 55.5
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 2.8e-46 189.5 134 73.1
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 8.9e-45 184.5 175 61.7
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.5e-44 183.7 168 58.3
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 3.2e-42 176.0 203 57.6
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 1.3e-40 170.6 178 60.7
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 4.3e-39 165.6 196 51.5
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 9.6e-39 164.5 196 55.1
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 3.1e-37 159.5 171 55.6
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.1e-34 151.0 140 62.1
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 9.3e-34 147.9 128 63.3
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 2.3e-32 143.3 128 60.9
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 3.3e-31 139.4 176 47.2
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.1e-29 132.9 152 51.3
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 8.4e-27 124.8 160 48.1
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 4.2e-26 122.5 145 48.3
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 1.4e-21 107.5 104 55.8
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 4.9e-19 99.0 75 66.7
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.5e-18 95.5 115 54.8
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 6.0e-17 92.0 128 45.3
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 5.1e-16 89.0 106 46.2
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 5.1e-08 62.4 112 45.5


User provided reference genes

Program Settings