Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 2.0e-75 285.8 157 100.0
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 8.2e-61 237.3 151 85.4
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 3.4e-59 231.9 163 84.7
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 1.4e-57 226.5 151 84.1
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 1.1e-46 190.3 149 72.5
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 9.7e-46 187.2 131 76.3
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 8.2e-45 184.1 152 61.8
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 5.3e-44 181.4 154 59.1
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 9.1e-44 180.6 152 59.9
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.5e-43 179.9 146 62.3
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 2.6e-43 179.1 149 63.8
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 2.6e-43 179.1 128 77.3
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 3.4e-43 178.7 154 58.4
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 4.5e-43 178.3 152 60.5
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.0e-42 177.2 155 58.1
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 1.0e-42 177.2 153 60.8
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 1.0e-42 177.2 148 60.8
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 1.3e-42 176.8 151 66.2
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 1.7e-42 176.4 149 62.4
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 1.7e-42 176.4 148 64.9
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 2.2e-42 176.0 150 60.0
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 2.9e-42 175.6 127 70.1
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 3.8e-42 175.3 148 64.9
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 3.8e-42 175.3 149 61.7
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 5.0e-42 174.9 148 62.8
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 5.0e-42 174.9 149 69.1
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 6.5e-42 174.5 151 61.6
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 6.5e-42 174.5 151 61.6
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 6.5e-42 174.5 151 61.6
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 6.5e-42 174.5 126 67.5
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 6.5e-42 174.5 138 63.0
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 6.5e-42 174.5 155 56.8
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 6.5e-42 174.5 138 72.5
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 8.5e-42 174.1 156 60.3
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 8.5e-42 174.1 143 61.5
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 1.1e-41 173.7 151 61.6
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 2.5e-41 172.6 125 68.0
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 3.2e-41 172.2 125 68.8
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 3.2e-41 172.2 149 67.8
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 4.2e-41 171.8 139 63.3
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 7.2e-41 171.0 125 71.2
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 9.4e-41 170.6 152 57.2
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 9.4e-41 170.6 140 62.9
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 1.2e-40 170.2 125 76.0
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 1.2e-40 170.2 150 60.7
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.2e-40 170.2 124 67.7
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.6e-40 169.9 124 67.7
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 1.6e-40 169.9 124 66.9
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 2.1e-40 169.5 124 68.5
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 2.7e-40 169.1 149 66.4
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 2.7e-40 169.1 133 72.2
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 2.7e-40 169.1 127 63.8
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 2.7e-40 169.1 131 67.9
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 3.6e-40 168.7 143 60.1
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 3.6e-40 168.7 140 62.1
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 4.7e-40 168.3 129 68.2
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 4.7e-40 168.3 125 76.0
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 6.1e-40 167.9 124 67.7
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 6.1e-40 167.9 125 66.4
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 6.1e-40 167.9 138 62.3
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 7.9e-40 167.5 150 59.3
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 7.9e-40 167.5 140 62.1
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 1.0e-39 167.2 124 67.7
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.0e-39 167.2 143 59.4
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 1.8e-39 166.4 126 65.9
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 2.3e-39 166.0 125 66.4
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 2.3e-39 166.0 126 61.9
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 2.3e-39 166.0 125 68.0
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 2.3e-39 166.0 125 75.2
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 3.9e-39 165.2 129 69.0
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 5.2e-39 164.9 122 68.9
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 5.2e-39 164.9 129 67.4
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 1.5e-38 163.3 124 63.7
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 2.0e-38 162.9 125 65.6
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 2.6e-38 162.5 123 64.2
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 4.4e-38 161.8 126 61.9
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 4.4e-38 161.8 149 54.4
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 5.7e-38 161.4 130 60.0
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 7.4e-38 161.0 154 54.5
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 9.7e-38 160.6 124 64.5
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 9.7e-38 160.6 129 60.5
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 1.3e-37 160.2 130 59.2
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.3e-37 160.2 124 62.1
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 1.7e-37 159.8 130 60.0
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.2e-37 159.5 130 59.2
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 2.8e-37 159.1 124 62.9
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 4.8e-37 158.3 125 60.8
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 6.3e-37 157.9 126 68.3
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 8.2e-37 157.5 125 74.4
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.4e-36 156.8 125 60.0
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 1.8e-36 156.4 141 56.7
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 1.8e-36 156.4 125 60.0
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.8e-36 156.4 127 58.3
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 4.1e-36 155.2 155 53.5
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 7.7e-35 151.0 139 56.1
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 7.7e-35 151.0 122 72.1
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 1.0e-34 150.6 120 61.7
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.7e-34 149.8 140 55.7
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 5.0e-34 148.3 122 64.8
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 1.1e-33 147.1 128 58.6
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.6e-32 143.3 126 57.1
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 1.6e-32 143.3 126 59.5
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 4.7e-32 141.7 125 57.6
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 8.8e-31 137.5 127 55.1
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 8.8e-31 137.5 129 54.3
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 2.2e-29 132.9 152 46.7
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 1.4e-28 130.2 123 52.0
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 7.0e-28 127.9 152 45.4
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 4.5e-27 125.2 86 68.6
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.5e-25 120.2 121 52.1
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 5.5e-25 118.2 119 49.6
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.6e-24 116.7 131 45.8
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 1.0e-23 114.0 146 42.5
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 3.4e-22 109.0 100 55.0
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 5.4e-20 101.7 87 56.3
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 1.7e-18 96.7 89 60.7
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 1.1e-17 94.0 146 40.4
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.1e-17 94.0 84 54.8
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 1.5e-17 93.6 80 55.0
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 5.5e-17 91.7 128 43.8
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 6.1e-16 88.2 80 50.0
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 7.0e-12 74.7 82 53.7
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.1e-09 67.4 120 39.2


User provided reference genes

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