Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26335 Trifolium pratense HOM05D000007 ORTHO05D048973 1.7e-105 386.0 184 100.0
Medtr4g128150 Medicago truncatula HOM05D000283 ORTHO05D000358 1.4e-19 100.5 169 39.1
TPR.G39142 Trifolium pratense HOM05D000003 ORTHO05D015712 6.5e-17 91.7 147 35.4
TPR.G25431 Trifolium pratense HOM05D000007 ORTHO05D000017 1.0e-14 84.3 86 53.5
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.4e-14 84.0 160 33.8
TPR.G35485 Trifolium pratense HOM05D039754 ORTHO05D015712 1.8e-14 83.6 140 35.0
TPR.G20992 Trifolium pratense HOM05D021040 ORTHO05D015712 3.9e-14 82.4 103 42.7
Psat4g083440 Pisum sativum HOM05D000003 ORTHO05D000004 2.6e-13 79.7 139 30.2
Lj4g0009536 Lotus japonicus HOM05D000003 ORTHO05D000004 4.4e-13 79.0 166 28.3
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 7.4e-13 78.2 166 32.5
Lj5g0002145 Lotus japonicus HOM05D000003 ORTHO05D000167 4.8e-12 75.5 168 28.6
Medtr1g033950 Medicago truncatula HOM05D000003 ORTHO05D012297 7.0e-11 71.6 138 30.4
Ah.01g010200 Amaranthus hybridus HOM05D000003 ORTHO05D000167 9.1e-11 71.2 95 37.9
Lj4g0023123 Lotus japonicus HOM05D000003 ORTHO05D000004 1.2e-10 70.9 154 31.8
AUR62006131 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.6e-10 69.7 157 28.0
Lj1g0000828 Lotus japonicus HOM05D000003 ORTHO05D000167 3.5e-10 69.3 153 31.4
EL10Ac9g21339 Beta vulgaris HOM05D000003 ORTHO05D000167 5.9e-10 68.6 177 28.2
EL10Ac4g08380 Beta vulgaris HOM05D000003 ORTHO05D000004 1.7e-09 67.0 153 29.4
Ah.12g061370 Amaranthus hybridus HOM05D000003 ORTHO05D000167 2.9e-09 66.2 145 30.3
Lj4C842T3 Lonicera japonica HOM05D000003 ORTHO05D000167 2.9e-09 66.2 150 29.3
Atru.chr9.1193 Acer truncatum HOM05D000003 ORTHO05D000167 3.8e-09 65.9 173 32.4
Atru.chr5.2450 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-09 65.5 181 31.5
Psat6g094280 Pisum sativum HOM05D000003 ORTHO05D017066 6.5e-09 65.1 153 29.4
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 6.5e-09 65.1 160 26.2
Atru.chr1.1940 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-08 64.3 164 29.9
CANSAT11G1435 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-08 63.9 171 26.9
Medtr4g095048 Medicago truncatula HOM05D000007 ORTHO05D048973 1.5e-08 63.9 60 51.7
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 1.9e-08 63.5 155 26.5
AUR62008577 Chenopodium quinoa HOM05D000344 ORTHO05D005296 2.5e-08 63.2 166 30.1
AUR62034035 Chenopodium quinoa HOM05D000003 ORTHO05D000006 3.2e-08 62.8 155 27.1
Manes.07G069794 Manihot esculenta HOM05D000003 ORTHO05D000167 3.2e-08 62.8 149 30.9
AUR62037669 Chenopodium quinoa HOM05D000413 ORTHO05D000004 4.2e-08 62.4 152 29.6
PSO170G5422 Papaver somniferum HOM05D007919 ORTHO05D006738 4.2e-08 62.4 165 32.1
PSO017G3839 Papaver somniferum HOM05D007919 ORTHO05D006738 7.2e-08 61.6 164 32.3
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 9.4e-08 61.2 152 28.9
PSO478G1036 Papaver somniferum HOM05D003407 ORTHO05D001026 1.2e-07 60.8 175 24.0
CANSAT01G0940 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-07 60.5 171 26.9
CANSAT25G1903 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-07 60.5 159 29.6
AUR62034608 Chenopodium quinoa HOM05D009702 ORTHO05D000004 1.6e-07 60.5 115 28.7
AUR62033797 Chenopodium quinoa HOM05D000003 ORTHO05D000167 2.1e-07 60.1 152 28.3
AUR62016225 Chenopodium quinoa HOM05D006035 ORTHO05D007155 3.6e-07 59.3 155 28.4
CANSAT25G0899 Cannabis sativa HOM05D000003 ORTHO05D000167 6.1e-07 58.5 154 27.9
CANSAT56G3244 Cannabis sativa HOM05D000003 ORTHO05D000167 6.1e-07 58.5 178 24.7
AUR62035911 Chenopodium quinoa HOM05D000003 ORTHO05D000004 8.0e-07 58.2 175 24.6
Medtr5g078690 Medicago truncatula HOM05D021040 ORTHO05D015712 8.0e-07 58.2 98 33.7
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 8.0e-07 58.2 159 27.0
CiPaw.07G069100 Carya illinoinensis HOM05D000003 ORTHO05D000167 1.4e-06 57.4 157 28.0
CANSAT01G0793 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-06 57.0 158 25.9
Medtr7g033205 Medicago truncatula HOM05D009584 ORTHO05D011650 1.8e-06 57.0 149 30.2
QL02p102610 Quercus lobata HOM05D008417 ORTHO05D010741 1.8e-06 57.0 98 32.7
CANSAT11G0573 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-06 56.2 164 25.0
PSO063G0655 Papaver somniferum HOM05D008740 ORTHO05D006738 3.0e-06 56.2 154 28.6
QL11p039844 Quercus lobata HOM05D000003 ORTHO05D011877 3.0e-06 56.2 164 28.7
RcHm_v2.0_Chr3g0486981 Rosa chinensis HOM05D000003 ORTHO05D006737 3.0e-06 56.2 168 27.4
PSO478G4870 Papaver somniferum HOM05D000003 ORTHO05D006738 6.7e-06 55.1 146 28.1
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 6.7e-06 55.1 183 26.2
EL10Ac9g23004 Beta vulgaris HOM05D000003 ORTHO05D000004 8.8e-06 54.7 158 27.2


User provided reference genes

Program Settings