Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26331 Trifolium pratense HOM05D000045 ORTHO05D000067 1.9e-56 222.2 112 100.0
TPR.G23616 Trifolium pratense HOM05D000045 ORTHO05D000067 4.8e-23 111.3 59 96.6
TPR.G22309 Trifolium pratense HOM05D000045 ORTHO05D000067 3.1e-22 108.6 59 94.9
TPR.G22307 Trifolium pratense HOM05D000045 ORTHO05D000067 5.5e-19 97.8 52 96.2
TPR.G9806 Trifolium pratense HOM05D000045 ORTHO05D000067 4.7e-18 94.7 59 79.7
TPR.G38439 Trifolium pratense HOM05D000045 ORTHO05D000067 9.1e-14 80.5 59 66.1
TPR.G35603 Trifolium pratense HOM05D000045 ORTHO05D000067 2.9e-12 75.5 79 45.6
Peaxi162Scf00049g00076 Petunia axillaris HOM05D000045 ORTHO05D000067 8.5e-12 73.9 59 55.9
Peaxi162Scf01514g00020 Petunia axillaris HOM05D000045 ORTHO05D000067 1.9e-11 72.8 59 55.9
EL10Ac6g14532 Beta vulgaris HOM05D000045 ORTHO05D000067 3.2e-11 72.0 59 57.6
TPR.G34153 Trifolium pratense HOM05D000045 ORTHO05D000067 5.5e-11 71.2 59 55.9
Medtr7g074790 Medicago truncatula HOM05D000045 ORTHO05D030148 9.4e-11 70.5 59 55.9
EL10Ac1g01868 Beta vulgaris HOM05D000045 ORTHO05D000067 2.7e-10 68.9 59 54.2
EL10Ac7g16467 Beta vulgaris HOM05D000045 ORTHO05D000067 2.7e-10 68.9 59 54.2
EL10Ac7g17614 Beta vulgaris HOM05D000045 ORTHO05D000611 2.7e-10 68.9 59 54.2
AUR62017476 Chenopodium quinoa HOM05D000045 ORTHO05D000611 1.4e-09 66.6 55 56.4
CSS0002394 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-09 65.1 59 54.2
CSS0017425 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-09 65.1 59 54.2
CSS0045912 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.0e-09 65.1 59 54.2
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.2e-09 64.7 59 54.2
CiPaw.09G035500 Carya illinoinensis HOM05D000045 ORTHO05D000067 6.8e-09 64.3 59 50.8
Rhsim02G0126700 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.8e-09 64.3 59 49.2
Rhsim12G0018100 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.8e-09 63.9 73 42.5
Atru.chr5.2454 Acer truncatum HOM05D003511 ORTHO05D004403 1.2e-08 63.5 59 47.5
EL10Ac2g03365 Beta vulgaris HOM05D000045 ORTHO05D019836 1.2e-08 63.5 57 50.9
Rhsim11G0165300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-08 62.4 59 52.5
RhsimUnG0130200 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-08 62.4 59 47.5
COL.COLO4_06875 Corchorus olitorius HOM05D000045 ORTHO05D000067 3.4e-08 62.0 59 49.2
QL04p064028 Quercus lobata HOM05D000045 ORTHO05D000067 3.4e-08 62.0 59 52.5
QL07p011111 Quercus lobata HOM05D000045 ORTHO05D000067 3.4e-08 62.0 59 52.5
Rhsim03G0118100 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.4e-08 62.0 59 47.5
Rhsim07G0060100 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.4e-08 62.0 59 47.5
Atru.chr8.1689 Acer truncatum HOM05D000045 ORTHO05D000067 4.4e-08 61.6 59 45.8
Actinidia02450 Actinidia chinensis HOM05D000045 ORTHO05D000067 4.4e-08 61.6 59 50.8
AUR62034711 Chenopodium quinoa HOM05D000045 ORTHO05D000067 4.4e-08 61.6 55 50.9
Rhsim08G0140300 Rhododendron simsii HOM05D000045 ORTHO05D004773 4.4e-08 61.6 59 49.2
COL.COLO4_12964 Corchorus olitorius HOM05D000045 ORTHO05D000067 5.7e-08 61.2 59 47.5
TPR.G18992 Trifolium pratense HOM05D000045 ORTHO05D000067 5.7e-08 61.2 59 47.5
TWI74G1247 Tripterygium wilfordii HOM05D000045 ORTHO05D012015 7.5e-08 60.8 59 52.5
Ciclev10030168m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.7e-07 59.7 59 47.5
COL.COLO4_29562 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.7e-07 59.7 59 45.8
TWI79G0323 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-07 59.3 64 48.4
QL03p055126 Quercus lobata HOM05D000045 ORTHO05D000611 2.8e-07 58.9 59 50.8
QL93p0073_0477 Quercus lobata HOM05D000045 ORTHO05D000067 3.7e-07 58.5 53 50.9
TWI31G1472 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.3e-07 57.8 61 47.5
CAN.G915.12 Capsicum annuum HOM05D000045 ORTHO05D000067 8.3e-07 57.4 59 45.8
Peaxi162Scf00106g00017 Petunia axillaris HOM05D000045 ORTHO05D000067 1.1e-06 57.0 59 47.5
Rhsim01G0226000 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-06 57.0 59 45.8
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.1e-06 57.0 59 45.8
TAR340G0001 Trochodendron aralioides HOM05D000045 ORTHO05D004773 1.1e-06 57.0 68 44.1
Atru.chr3.3094 Acer truncatum HOM05D000045 ORTHO05D000067 1.4e-06 56.6 60 41.7
CANSAT11G1643 Cannabis sativa HOM05D000045 ORTHO05D000611 1.4e-06 56.6 55 47.3
AUR62040076 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.8e-06 56.2 59 44.1
Rhsim10G0174800 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.8e-06 56.2 58 50.0
Os10g0571900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 2.4e-06 55.8 59 47.5
Rhsim02G0232300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.4e-06 55.8 52 55.8
TWI18G0018 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.4e-06 55.8 59 47.5
TWI34G0182 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.4e-06 55.8 59 45.8
TWI34G0702 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.4e-06 55.8 59 45.8
TWI34G1179 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 2.4e-06 55.8 59 45.8
TWI73G1051 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.4e-06 55.8 59 47.5
CSS0017444 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.1e-06 55.5 59 42.4
CSS0047463 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D009008 3.1e-06 55.5 59 47.5
CANSAT64G2947 Cannabis sativa HOM05D000045 ORTHO05D000067 3.1e-06 55.5 55 47.3
TPR.G18125 Trifolium pratense HOM05D000045 ORTHO05D000067 3.1e-06 55.5 59 45.8
TPR.G28057 Trifolium pratense HOM05D000045 ORTHO05D000067 3.1e-06 55.5 59 45.8
TPR.G34286 Trifolium pratense HOM05D000045 ORTHO05D000067 3.1e-06 55.5 57 47.4
TPR.G39876 Trifolium pratense HOM05D000045 ORTHO05D000067 3.1e-06 55.5 64 45.3
CANSAT21G0455 Cannabis sativa HOM05D000045 ORTHO05D000067 4.1e-06 55.1 71 38.0
QL06p047907 Quercus lobata HOM05D000045 ORTHO05D000067 4.1e-06 55.1 57 49.1
Sopen07g007600 Solanum pennellii HOM05D000045 ORTHO05D013823 4.1e-06 55.1 64 43.8
EL10Ac2g03509 Beta vulgaris HOM05D000045 ORTHO05D000067 5.4e-06 54.7 58 48.3
CANSAT01G2577 Cannabis sativa HOM05D000045 ORTHO05D000067 5.4e-06 54.7 57 45.6
PSO206G0012 Papaver somniferum HOM05D000045 ORTHO05D000067 5.4e-06 54.7 58 41.4
PSO541G1553 Papaver somniferum HOM05D000045 ORTHO05D000067 5.4e-06 54.7 58 41.4
PSO675G1270 Papaver somniferum HOM05D000045 ORTHO05D000067 5.4e-06 54.7 58 41.4
PSO832G0851 Papaver somniferum HOM05D000045 ORTHO05D000067 5.4e-06 54.7 58 41.4
COL.COLO4_20854 Corchorus olitorius HOM05D000045 ORTHO05D000611 9.1e-06 53.9 52 48.1
COL.COLO4_34382 Corchorus olitorius HOM05D000045 ORTHO05D000067 9.1e-06 53.9 59 39.0


User provided reference genes

Program Settings