Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 3.5e-42 174.5 84 100.0
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 1.1e-35 152.9 84 90.5
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 3.6e-31 137.9 83 81.9
TPR.G17727 Trifolium pratense HOM05D008018 ORTHO05D001531 3.7e-28 127.9 84 81.0
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 6.4e-28 127.1 83 74.7
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 8.3e-28 126.7 83 74.7
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 1.4e-27 125.9 84 78.6
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 1.4e-27 125.9 83 73.5
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 7.0e-27 123.6 83 75.9
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 7.0e-27 123.6 83 74.7
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 1.2e-26 122.9 75 80.0
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.6e-26 122.5 86 75.6
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 1.6e-26 122.5 83 75.9
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 2.0e-26 122.1 83 73.5
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 8.6e-25 116.7 83 69.9
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 1.5e-24 115.9 81 72.8
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 1.5e-24 115.9 81 72.8
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 1.9e-24 115.5 82 73.2
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 1.2e-21 106.3 85 69.4
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 4.4e-21 104.4 83 66.3
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.9e-20 101.7 83 65.1
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.9e-20 101.7 83 65.1
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.4e-19 98.6 82 64.6
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 9.2e-19 96.7 83 65.1
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 1.2e-18 96.3 83 65.1
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 1.6e-18 95.9 83 63.9
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 4.6e-18 94.4 83 62.7
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 4.6e-18 94.4 84 60.7
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 4.6e-18 94.4 84 60.7
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 6.0e-18 94.0 85 62.4
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 7.8e-18 93.6 72 68.1
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 1.5e-16 89.4 84 59.5
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 2.1e-15 85.5 81 54.3
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 2.1e-15 85.5 84 53.6
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 3.6e-15 84.7 83 56.6
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 6.2e-15 84.0 82 51.2
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 1.1e-14 83.2 85 49.4
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 5.2e-14 80.9 82 52.4
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 5.2e-14 80.9 80 52.5
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 6.8e-14 80.5 78 56.4
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 8.9e-14 80.1 78 56.4
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 8.9e-14 80.1 78 56.4
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 1.2e-13 79.7 81 53.1
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 1.2e-13 79.7 83 53.0
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 3.4e-13 78.2 80 53.8
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 3.4e-13 78.2 80 53.8
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 4.4e-13 77.8 81 54.3
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 5.8e-13 77.4 82 50.0
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.3e-12 76.3 79 51.9
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 1.7e-12 75.9 72 56.9
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.9e-12 75.1 79 50.6
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 2.9e-12 75.1 79 50.6
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 4.9e-12 74.3 76 47.4
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 4.9e-12 74.3 80 52.5
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 6.4e-12 73.9 76 47.4
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 6.4e-12 73.9 84 47.6
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 8.4e-12 73.6 82 48.8
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 1.4e-11 72.8 80 50.0
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 2.4e-11 72.0 67 58.2
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 7.1e-11 70.5 81 49.4
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 9.2e-11 70.1 81 45.7
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 9.2e-11 70.1 81 45.7
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 3.5e-10 68.2 81 43.2
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 6.0e-10 67.4 82 48.8
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 7.8e-10 67.0 78 52.6
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.0e-09 65.1 81 50.6
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 3.9e-09 64.7 79 49.4
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 6.6e-09 63.9 81 48.1
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 6.6e-09 63.9 81 48.1
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 1.5e-08 62.8 83 48.2
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 1.5e-08 62.8 82 45.1
MELO3C025018.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.9e-08 62.4 83 48.2
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 1.9e-08 62.4 82 45.1
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 1.9e-08 62.4 82 45.1
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 1.9e-08 62.4 78 47.4
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 4.3e-08 61.2 86 48.8
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 5.6e-08 60.8 81 46.9
Phvul.001G221800 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 9.6e-08 60.1 71 50.7
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.2e-07 59.7 83 45.8
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.6e-07 59.3 85 45.9
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 1.6e-07 59.3 85 44.7
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 1.6e-07 59.3 85 47.1
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 2.1e-07 58.9 84 45.2
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.1e-07 58.9 84 45.2
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.1e-07 58.9 84 45.2
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.1e-07 58.9 84 45.2
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 2.8e-07 58.5 85 45.9
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 2.8e-07 58.5 85 45.9
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 2.8e-07 58.5 85 45.9
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 2.8e-07 58.5 85 45.9
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 2.8e-07 58.5 63 49.2
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 3.6e-07 58.2 85 45.9
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 3.6e-07 58.2 85 45.9
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 3.6e-07 58.2 85 45.9
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 3.6e-07 58.2 73 46.6
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.6e-07 58.2 82 46.3
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 4.7e-07 57.8 85 45.9
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 4.7e-07 57.8 85 45.9
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 4.7e-07 57.8 85 45.9
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 4.7e-07 57.8 85 45.9
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 4.7e-07 57.8 87 44.8
MELO3C025021.2 Cucumis melo HOM05D002165 ORTHO05D001531 4.7e-07 57.8 83 47.0
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 4.7e-07 57.8 66 45.5
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 4.7e-07 57.8 66 45.5
VMungo1383G2747 Vigna mungo HOM05D008018 ORTHO05D001531 4.7e-07 57.8 71 49.3
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 6.2e-07 57.4 76 47.4
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 6.2e-07 57.4 68 50.0
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.2e-07 57.4 87 44.8
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.2e-07 57.4 87 44.8
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 6.2e-07 57.4 87 44.8
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 8.1e-07 57.0 87 43.7
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 8.1e-07 57.0 87 43.7
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 8.1e-07 57.0 82 45.1
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 8.1e-07 57.0 79 45.6
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 1.1e-06 56.6 85 43.5
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 1.4e-06 56.2 83 45.8
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.4e-06 56.2 81 46.9
MELO3C004151.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.4e-06 56.2 75 42.7
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.8e-06 55.8 81 46.9
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.8e-06 55.8 86 44.2
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.1e-06 55.1 87 43.7
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 4.0e-06 54.7 80 47.5
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 5.2e-06 54.3 70 41.4
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 5.2e-06 54.3 82 45.1
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 5.2e-06 54.3 82 45.1
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 5.2e-06 54.3 82 45.1
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 5.2e-06 54.3 82 45.1
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 5.2e-06 54.3 82 45.1
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 9.0e-06 53.5 88 38.6
CsaV3_6G002650 Cucumis sativus L. HOM05D002165 ORTHO05D001531 9.0e-06 53.5 83 43.4


User provided reference genes

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