Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26295 Trifolium pratense HOM05D004836 ORTHO05D005150 4.9e-94 347.8 178 100.0
Medtr1g111660 Medicago truncatula HOM05D004836 ORTHO05D005150 8.7e-59 230.7 178 73.6
Ca_25650_v3 Cicer arietinum L. HOM05D004836 ORTHO05D005150 1.9e-53 213.0 183 67.2
Glyma.10G277400 Glycine max HOM05D004836 ORTHO05D005150 1.0e-51 207.2 173 67.1
Glyma.20G112200 Glycine max HOM05D004836 ORTHO05D005150 9.9e-47 190.7 177 62.7
Phvul.003G265300 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 8.7e-43 177.6 177 58.2
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 6.9e-40 167.9 178 57.3
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 6.5e-38 161.4 179 58.1
Lalb_Chr06g0166281 Lupinus albus HOM05D004836 ORTHO05D005150 1.9e-37 159.8 178 54.5
Lalb_Chr21g0309081 Lupinus albus HOM05D004836 ORTHO05D005150 1.1e-32 144.1 179 50.3
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 1.6e-28 130.2 134 55.2
Lj5g0000015 Lotus japonicus HOM05D004836 ORTHO05D005150 1.3e-25 120.6 131 55.7
VMungo0720G3177 Vigna mungo HOM05D004836 ORTHO05D005150 1.0e-22 110.9 142 47.9
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 9.4e-21 104.4 173 41.6
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 9.4e-21 104.4 138 48.6
TWI39G0854 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 6.1e-20 101.7 140 49.3
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 7.9e-20 101.3 107 50.5
Gohir.A01G091700 Gossypium hirsutum HOM05D004836 ORTHO05D005150 3.9e-19 99.0 80 60.0
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 5.1e-19 98.6 176 42.0
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 2.6e-18 96.3 107 49.5
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 9.7e-18 94.4 133 43.6
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 9.7e-18 94.4 133 43.6
Gohir.D13G135900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 4.8e-17 92.0 106 49.1
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 4.8e-17 92.0 180 37.8
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 1.1e-16 90.9 157 42.0
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 1.1e-16 90.9 137 46.7
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 1.8e-16 90.1 83 56.6
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 2.4e-16 89.7 147 42.2
MD00G1168400 Malus domestica HOM05D004836 ORTHO05D005150 3.1e-16 89.4 137 46.7
Gorai.013G152400 Gossypium raimondii HOM05D004836 ORTHO05D005150 4.1e-16 89.0 106 48.1
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 2.6e-15 86.3 107 47.7
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 3.4e-15 85.9 184 37.5
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 4.5e-15 85.5 71 56.3
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 5.9e-15 85.1 160 35.0
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 7.7e-15 84.7 177 38.4
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 1.0e-14 84.3 186 36.6
Actinidia30399 Actinidia chinensis HOM05D004836 ORTHO05D005150 1.7e-14 83.6 86 52.3
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 1.7e-14 83.6 157 36.9
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 2.2e-14 83.2 185 38.4
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 2.2e-14 83.2 105 46.7
Gohir.A13G132500 Gossypium hirsutum HOM05D004836 ORTHO05D005150 3.8e-14 82.4 107 45.8
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 8.5e-14 81.3 183 37.2
Ah.06g181450 Amaranthus hybridus HOM05D004836 ORTHO05D005150 1.4e-13 80.5 81 48.1
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 1.4e-13 80.5 126 41.3
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 1.9e-13 80.1 166 37.3
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 2.5e-13 79.7 141 42.6
EL10Ac4g07562 Beta vulgaris HOM05D004836 ORTHO05D005150 3.2e-13 79.3 97 47.4
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 9.4e-13 77.8 206 33.5
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 9.4e-13 77.8 119 41.2
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 1.2e-12 77.4 184 34.2
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 2.1e-12 76.6 132 43.9
Ciclev10007227m.g Citrus clementina HOM05D004836 ORTHO05D005150 3.6e-12 75.9 106 44.3
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 3.6e-12 75.9 151 36.4
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 3.6e-12 75.9 185 33.5
PGSC0003DMG400022276 Solanum tuberosum HOM05D004836 ORTHO05D005150 3.6e-12 75.9 185 34.1
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 3.6e-12 75.9 161 33.5
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 4.7e-12 75.5 61 59.0
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 6.1e-12 75.1 185 33.5
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 1.4e-11 73.9 179 33.5
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 1.4e-11 73.9 174 34.5
Sp6g17700 Schrenkiella parvula HOM05D004836 ORTHO05D005150 1.4e-11 73.9 138 39.1
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 1.8e-11 73.6 149 34.9
CsaV3_7G011380 Cucumis sativus L. HOM05D004836 ORTHO05D005150 2.3e-11 73.2 74 48.6
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 2.3e-11 73.2 78 47.4
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 3.9e-11 72.4 188 34.0
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 3.9e-11 72.4 127 37.0
vmacro11593 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 5.2e-11 72.0 125 38.4
Carub.0008s1617 Capsella rubella HOM05D004836 ORTHO05D005150 6.7e-11 71.6 163 36.2
FAN10G2990 Fragaria x ananassa HOM05D004836 ORTHO05D005150 6.7e-11 71.6 194 35.6
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 6.7e-11 71.6 155 37.4
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 1.5e-10 70.5 129 38.8
Sed0003689 Sechium edule HOM05D004836 ORTHO05D005150 1.5e-10 70.5 119 39.5
MD00G1168200 Malus domestica HOM05D004836 ORTHO05D005150 2.0e-10 70.1 187 35.3
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 3.3e-10 69.3 66 48.5
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 3.3e-10 69.3 108 43.5
AT5G55820 Arabidopsis thaliana HOM05D004836 ORTHO05D005150 5.7e-10 68.6 74 47.3
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 5.7e-10 68.6 182 30.2
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 5.7e-10 68.6 71 49.3
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 1.3e-09 67.4 74 51.4
AUR62036461 Chenopodium quinoa HOM05D004836 ORTHO05D005150 1.7e-09 67.0 88 48.9
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 1.7e-09 67.0 62 51.6
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 1.7e-09 67.0 129 37.2
Aa31LG3G11720 Aethionema arabicum HOM05D004836 ORTHO05D005150 2.2e-09 66.6 163 31.9
ClCG09G021380 Citrullus lanatus HOM05D004836 ORTHO05D005150 2.2e-09 66.6 71 47.9
C03p16240 Brassica napus HOM05D004836 ORTHO05D005150 2.8e-09 66.2 111 38.7
COL.COLO4_09837 Corchorus olitorius HOM05D004836 ORTHO05D005150 3.7e-09 65.9 74 47.3
AUR62017108 Chenopodium quinoa HOM05D004836 ORTHO05D005150 4.8e-09 65.5 88 46.6
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 4.8e-09 65.5 66 50.0
MELO3C024947.2 Cucumis melo HOM05D004836 ORTHO05D005150 6.3e-09 65.1 158 34.2
Thhalv10012421m.g Eutrema salsugineum HOM05D004836 ORTHO05D005150 1.8e-08 63.5 142 37.3
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 3.1e-08 62.8 147 29.9
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 3.1e-08 62.8 66 48.5
THA.LOC104811669 Tarenaya hassleriana HOM05D004836 ORTHO05D005150 4.1e-08 62.4 182 31.9
SEGI_26437 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 2.0e-07 60.1 68 45.6
unitig_22.g5946 Utricularia gibba HOM05D004836 ORTHO05D005150 2.0e-07 60.1 171 29.8
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.6e-07 59.7 183 32.2
Hund23108 Selenicereus undatus HOM05D004836 ORTHO05D005150 2.6e-07 59.7 179 30.2
SEGI_04158 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 2.6e-07 59.7 68 44.1
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 3.5e-07 59.3 186 33.3
HanXRQChr03g0074011 Helianthus annuus HOM05D004836 ORTHO05D005150 3.5e-07 59.3 178 28.7
PSO063G5346 Papaver somniferum HOM05D004836 ORTHO05D005150 3.5e-07 59.3 173 28.9
PSO541G5284 Papaver somniferum HOM05D004836 ORTHO05D005150 3.5e-07 59.3 129 32.6
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 7.7e-07 58.2 168 31.0
PSO675G3612 Papaver somniferum HOM05D004836 ORTHO05D005150 7.7e-07 58.2 134 31.3
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 7.7e-07 58.2 173 29.5
Hund20644 Selenicereus undatus HOM05D004836 ORTHO05D005150 7.7e-07 58.2 179 31.8
CBR_g22984 Chara braunii HOM05D014698 ORTHO05D016532 1.7e-06 57.0 61 45.9
HPP92_018201 Vanilla planifolia HOM05D004836 ORTHO05D005150 1.7e-06 57.0 120 32.5
CARHR269190 Cardamine hirsuta HOM05D004836 ORTHO05D005150 2.2e-06 56.6 157 31.8
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 3.8e-06 55.8 180 32.8


User provided reference genes

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