Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26160 Trifolium pratense HOM05D004830 ORTHO05D005310 2.9e-73 278.5 142 100.0
Glyma.06G170600 Glycine max HOM05D004830 ORTHO05D005310 1.1e-45 186.8 133 72.9
Ca_24504_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 6.3e-44 181.0 133 72.9
Medtr3g089170 Medicago truncatula HOM05D004830 ORTHO05D005310 8.2e-44 180.6 133 72.2
arahy.Tifrunner.gnm1.ann1.CC2DBD Arachis hypogaea HOM05D004830 ORTHO05D005310 9.1e-43 177.2 140 69.3
arahy.Tifrunner.gnm1.ann1.228PAQ Arachis hypogaea HOM05D004830 ORTHO05D005310 1.4e-40 169.9 140 67.1
Lj1g0026153 Lotus japonicus HOM05D004830 ORTHO05D005310 1.9e-40 169.5 133 68.4
Glyma.04G195400 Glycine max HOM05D004830 ORTHO05D005310 7.9e-39 164.1 133 66.9
Phvul.009G166700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 7.9e-39 164.1 133 67.7
VMungo1309G0155 Vigna mungo HOM05D004830 ORTHO05D005310 1.4e-38 163.3 133 67.7
Lalb_Chr11g0069591 Lupinus albus HOM05D004830 ORTHO05D005310 7.4e-37 157.5 132 63.6
CiPaw.11G008200 Carya illinoinensis HOM05D004830 ORTHO05D005310 8.2e-36 154.1 133 63.9
Cfa018828 Carpinus fangiana HOM05D004830 ORTHO05D005310 5.3e-35 151.4 133 62.4
QL10p003269 Quercus lobata HOM05D004830 ORTHO05D005310 5.3e-35 151.4 133 63.9
GSVIVG01008536001 Vitis vinifera HOM05D004830 ORTHO05D005310 1.7e-33 146.4 131 61.1
CSS0034026 Camellia sinensis var. sinensis HOM05D004830 ORTHO05D005310 5.0e-33 144.8 136 60.3
TAR622G0015 Trochodendron aralioides HOM05D004830 ORTHO05D005310 1.5e-32 143.3 133 60.9
QL10p003210 Quercus lobata HOM05D004830 ORTHO05D005310 1.9e-32 142.9 133 60.9
QL10p003237 Quercus lobata HOM05D004830 ORTHO05D005310 1.9e-32 142.9 134 60.4
COL.COLO4_28101 Corchorus olitorius HOM05D004830 ORTHO05D005310 2.5e-32 142.5 145 56.6
Actinidia08868 Actinidia chinensis HOM05D004830 ORTHO05D005310 3.2e-32 142.1 131 60.3
Aqoxy5G03391 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 2.7e-31 139.0 136 56.6
Cpa.g.sc13.124 Carica papaya HOM05D004830 ORTHO05D005310 2.7e-31 139.0 141 56.7
Lj5A97T92 Lonicera japonica HOM05D004830 ORTHO05D005310 6.1e-31 137.9 137 58.4
Aqoxy7G00964 Aquilegia oxysepala HOM05D004830 ORTHO05D005310 1.8e-30 136.3 133 56.4
Manes.14G051600 Manihot esculenta HOM05D004830 ORTHO05D005310 2.3e-30 136.0 134 57.5
Thecc.03G128400 Theobroma cacao HOM05D004830 ORTHO05D005310 6.7e-30 134.4 133 56.4
Rhsim12G0174200 Rhododendron simsii HOM05D004830 ORTHO05D005310 1.5e-29 133.3 131 57.3
Atru.chr9.1044 Acer truncatum HOM05D004830 ORTHO05D005310 2.6e-29 132.5 134 56.0
Duzib084G0035 Durio zibethinus HOM05D004830 ORTHO05D005310 2.6e-29 132.5 133 55.6
Migut.I00505 Erythranthe guttata HOM05D004830 ORTHO05D005310 3.3e-29 132.1 131 55.0
Eucgr.K02732 Eucalyptus grandis HOM05D004830 ORTHO05D005310 3.3e-29 132.1 135 53.3
Nn3g16476 Nelumbo nucifera HOM05D004830 ORTHO05D005310 3.3e-29 132.1 133 56.4
MSTRG.11282 Avicennia marina HOM05D004830 ORTHO05D005310 7.5e-29 131.0 129 56.6
RcHm_v2.0_Chr7g0190301 Rosa chinensis HOM05D004830 ORTHO05D005310 1.3e-28 130.2 133 52.6
Psat5g140640 Pisum sativum HOM05D004830 ORTHO05D005310 1.7e-28 129.8 96 72.9
Potri.012G097200 Populus trichocarpa HOM05D004830 ORTHO05D005310 3.7e-28 128.6 134 57.5
Oeu056012.1 Olea europaea HOM05D004830 ORTHO05D005310 1.1e-27 127.1 131 55.0
MD06G1142500 Malus domestica HOM05D004830 ORTHO05D005310 1.4e-27 126.7 131 54.2
Dinv23140 Davidia involucrata HOM05D004830 ORTHO05D005310 2.4e-27 125.9 121 57.9
Ciclev10022323m.g Citrus clementina HOM05D004830 ORTHO05D005310 3.1e-27 125.6 134 53.7
Prupe.5G151800 Prunus persica HOM05D004830 ORTHO05D005310 3.1e-27 125.6 132 53.8
PGR044G2645 Punica granatum HOM05D004830 ORTHO05D005310 3.1e-27 125.6 131 50.4
Gohir.A03G052400 Gossypium hirsutum HOM05D004830 ORTHO05D005310 2.0e-26 122.9 133 53.4
Gorai.003G121000 Gossypium raimondii HOM05D004830 ORTHO05D005310 2.7e-26 122.5 133 53.4
FAN13G1978 Fragaria x ananassa HOM05D004830 ORTHO05D005310 3.5e-26 122.1 133 51.9
Haze_07222 Corylus avellana HOM05D004830 ORTHO05D005310 1.0e-25 120.6 123 56.1
FAN18G1516 Fragaria x ananassa HOM05D004830 ORTHO05D005310 2.2e-25 119.4 133 51.1
FAN08G1417 Fragaria x ananassa HOM05D004830 ORTHO05D005310 5.0e-25 118.2 130 51.5
PSO063G3292 Papaver somniferum HOM05D004830 ORTHO05D005310 1.9e-24 116.3 131 52.7
Peaxi162Scf00536g00113 Petunia axillaris HOM05D004830 ORTHO05D005310 2.5e-24 115.9 138 50.7
FvH4_5g08220 Fragaria vesca HOM05D004830 ORTHO05D005310 3.2e-24 115.5 133 50.4
ATR0561G210 Amborella trichopoda HOM05D004830 ORTHO05D005310 7.2e-24 114.4 133 51.1
PSO782G4089 Papaver somniferum HOM05D004830 ORTHO05D005310 1.6e-23 113.2 131 51.1
Nitab4.5_0002855g0030 Nicotiana tabacum HOM05D004830 ORTHO05D005310 1.4e-22 110.2 136 48.5
Nitab4.5_0002062g0020 Nicotiana tabacum HOM05D004830 ORTHO05D005310 5.7e-21 104.8 142 45.8
ATR0332G003 Amborella trichopoda HOM05D004830 ORTHO05D005310 9.8e-21 104.0 133 48.9
CDE02G3469 Ceratophyllum demersum HOM05D004830 ORTHO05D005310 1.3e-20 103.6 129 46.5
MBI13_g01839_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 7.0e-19 97.8 86 60.5
Gohir.D03G114700 Gossypium hirsutum HOM05D004830 ORTHO05D005310 1.2e-18 97.1 118 50.8
Nn7g37285 Nelumbo nucifera HOM05D004830 ORTHO05D005310 1.7e-17 93.2 133 42.9
ECA232G3637 Erigeron canadensis HOM05D004830 ORTHO05D005310 6.5e-17 91.3 126 46.0
Lsat_1_v5_gn_4_80120 Lactuca sativa HOM05D004830 ORTHO05D005310 4.2e-16 88.6 123 46.3
MBI11_g07465_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 4.2e-16 88.6 79 59.5
vmacro16674 Vaccinium macrocarpon HOM05D004830 ORTHO05D005310 1.0e-14 84.0 117 43.6
Cc00_g11930 Coffea canephora HOM05D004830 ORTHO05D005310 2.0e-13 79.7 141 40.4
HanXRQChr09g0273121 Helianthus annuus HOM05D004830 ORTHO05D005310 2.2e-12 76.3 119 42.9
Gohir.D06G037550 Gossypium hirsutum HOM05D004830 ORTHO05D005310 4.9e-12 75.1 127 40.2
RcHm_v2.0_Chr3g0495501 Rosa chinensis HOM05D004830 ORTHO05D005310 6.3e-12 74.7 171 31.6
unitig_8.g3032 Utricularia gibba HOM05D004830 ORTHO05D005310 1.8e-11 73.2 127 35.4
SEGI_37187 Sequoiadendron giganteum HOM05D004830 ORTHO05D005310 2.4e-11 72.8 209 29.2
HPP92_013617 Vanilla planifolia HOM05D004830 ORTHO05D005310 1.2e-10 70.5 76 48.7
TAR633G1142 Trochodendron aralioides HOM05D004830 ORTHO05D005310 3.5e-10 68.9 211 29.4
TWI34G0970 Tripterygium wilfordii HOM05D004830 ORTHO05D005310 5.9e-10 68.2 211 27.0
Os08g0530500 Oryza sativa ssp. japonica HOM05D004830 ORTHO05D005310 1.0e-09 67.4 134 33.6
ATR0307G071 Amborella trichopoda HOM05D004830 ORTHO05D005310 3.8e-09 65.5 201 28.4
CiPaw.09G053100 Carya illinoinensis HOM05D004830 ORTHO05D005310 6.6e-09 64.7 207 27.1
FAN19G2808 Fragaria x ananassa HOM05D004830 ORTHO05D005310 6.6e-09 64.7 173 29.5
Gohir.D08G162001 Gossypium hirsutum HOM05D004830 ORTHO05D005310 6.6e-09 64.7 64 53.1
FvH4_1g29410 Fragaria vesca HOM05D004830 ORTHO05D005310 1.1e-08 63.9 173 29.5
Lalb_Chr22g0358351 Lupinus albus HOM05D004830 ORTHO05D005310 1.5e-08 63.5 214 26.2
COL.COLO4_33470 Corchorus olitorius HOM05D004830 ORTHO05D005310 4.3e-08 62.0 211 26.1
Glyma.19G121200 Glycine max HOM05D004830 ORTHO05D005310 4.3e-08 62.0 188 25.5
Potri.013G068900 Populus trichocarpa HOM05D004830 ORTHO05D005310 5.6e-08 61.6 203 25.6
Manes.08G155600 Manihot esculenta HOM05D004830 ORTHO05D005310 1.6e-07 60.1 77 42.9
MD14G1012800 Malus domestica HOM05D004830 ORTHO05D005310 3.6e-07 58.9 191 26.7
Haze_20367 Corylus avellana HOM05D004830 ORTHO05D005310 4.7e-07 58.5 203 27.6
Gohir.A11G224212 Gossypium hirsutum HOM05D004830 ORTHO05D005310 4.7e-07 58.5 212 25.9
Sabra13G0059800 Salix brachista HOM05D004830 ORTHO05D005310 4.7e-07 58.5 203 24.6
Atru.chr2.1607 Acer truncatum HOM05D004830 ORTHO05D005310 6.1e-07 58.2 178 28.1
Gorai.007G250900 Gossypium raimondii HOM05D004830 ORTHO05D005310 6.1e-07 58.2 219 26.0
Gohir.D11G237500 Gossypium hirsutum HOM05D004830 ORTHO05D005310 8.0e-07 57.8 212 25.5
Prupe.1G058500 Prunus persica HOM05D004830 ORTHO05D005310 1.0e-06 57.4 132 33.3
Duzib106G0998 Durio zibethinus HOM05D004830 ORTHO05D005310 1.8e-06 56.6 75 41.3
Ca_03431_v3 Cicer arietinum L. HOM05D004830 ORTHO05D005310 2.3e-06 56.2 84 36.9
Aa31LG5G8500 Aethionema arabicum HOM05D000045 ORTHO05D000067 3.0e-06 55.8 74 44.6
MBI19_g47438_MAGBIO Magnolia biondii HOM05D004830 ORTHO05D005310 3.0e-06 55.8 79 40.5
QL07p015956 Quercus lobata HOM05D004830 ORTHO05D005310 3.0e-06 55.8 76 42.1
Phvul.001G101700 Phaseolus vulgaris HOM05D004830 ORTHO05D005310 4.0e-06 55.5 77 40.3
CDE08G0868 Ceratophyllum demersum HOM05D000045 ORTHO05D005310 6.8e-06 54.7 79 39.2
Medtr7g087480 Medicago truncatula HOM05D004830 ORTHO05D005310 6.8e-06 54.7 74 39.2
CANSAT78G0784 Cannabis sativa HOM05D004830 ORTHO05D005310 8.9e-06 54.3 77 37.7
Thecc.05G236700 Theobroma cacao HOM05D004830 ORTHO05D005310 8.9e-06 54.3 75 40.0


User provided reference genes

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