Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_18737_v3 Cicer arietinum L. HOM05D001046 ORTHO05D007174 3.4e-21 104.0 50 100.0
Ca_30694_v3 Cicer arietinum L. HOM05D001046 ORTHO05D007174 3.4e-21 104.0 50 100.0
TPR.G26128 Trifolium pratense HOM05D001046 ORTHO05D007174 3.4e-21 104.0 50 100.0
Psat7g128600 Pisum sativum HOM05D001046 ORTHO05D007174 1.3e-20 102.1 50 94.0
Medtr4g084660 Medicago truncatula HOM05D001046 ORTHO05D007174 5.0e-20 100.1 50 96.0
arahy.Tifrunner.gnm1.ann1.R35CQ9 Arachis hypogaea HOM05D001046 ORTHO05D007174 6.5e-20 99.8 50 96.0
arahy.Tifrunner.gnm1.ann1.3TS05T Arachis hypogaea HOM05D001046 ORTHO05D007174 1.4e-19 98.6 50 94.0
Glyma.07G218600 Glycine max HOM05D001046 ORTHO05D007174 1.4e-19 98.6 50 94.0
Glyma.20G017000 Glycine max HOM05D001046 ORTHO05D007174 1.4e-19 98.6 50 94.0
Phvul.002G095000 Phaseolus vulgaris HOM05D001046 ORTHO05D007174 1.4e-19 98.6 50 94.0
Lj4g0011214 Lotus japonicus HOM05D001046 ORTHO05D007174 1.9e-19 98.2 50 92.0
VMungo0251G1068 Vigna mungo HOM05D001046 ORTHO05D007174 3.2e-19 97.4 50 92.0
Lalb_Chr09g0328541 Lupinus albus HOM05D001046 ORTHO05D007174 1.2e-18 95.5 50 92.0
Cfa008619 Carpinus fangiana HOM05D001046 ORTHO05D007174 2.7e-18 94.4 52 90.4
CiPaw.05G250600 Carya illinoinensis HOM05D001046 ORTHO05D007174 2.7e-18 94.4 52 90.4
MD16G1027200 Malus domestica HOM05D001046 ORTHO05D007174 2.7e-18 94.4 52 90.4
Prupe.1G326000 Prunus persica HOM05D001046 ORTHO05D007174 2.7e-18 94.4 52 90.4
QL01p001482 Quercus lobata HOM05D001046 ORTHO05D007174 2.7e-18 94.4 52 90.4
Nn4g24188 Nelumbo nucifera HOM05D001046 ORTHO05D007174 3.6e-18 94.0 52 88.5
TAR622G0834 Trochodendron aralioides HOM05D001046 ORTHO05D007174 3.6e-18 94.0 52 88.5
MD13G1024500 Malus domestica HOM05D001046 ORTHO05D007174 6.1e-18 93.2 52 86.5
Atru.chr11.504 Acer truncatum HOM05D001046 ORTHO05D007174 7.9e-18 92.8 52 88.5
ClCG11G001250 Citrullus lanatus HOM05D001046 ORTHO05D007174 7.9e-18 92.8 52 86.5
Ciclev10014169m.g Citrus clementina HOM05D001046 ORTHO05D007174 7.9e-18 92.8 52 88.5
Potri.010G111900 Populus trichocarpa HOM05D001046 ORTHO05D007174 7.9e-18 92.8 52 88.5
TWI31G0274 Tripterygium wilfordii HOM05D001046 ORTHO05D007174 7.9e-18 92.8 52 88.5
FvH4_4g32570 Fragaria vesca HOM05D001046 ORTHO05D007174 1.0e-17 92.4 52 88.5
FAN07G0377 Fragaria x ananassa HOM05D001046 ORTHO05D007174 1.0e-17 92.4 52 88.5
FAN12G0077 Fragaria x ananassa HOM05D001046 ORTHO05D007174 1.0e-17 92.4 52 88.5
FAN17G1443 Fragaria x ananassa HOM05D001046 ORTHO05D007174 1.0e-17 92.4 52 88.5
RcHm_v2.0_Chr4g0441441 Rosa chinensis HOM05D001046 ORTHO05D007174 1.0e-17 92.4 52 88.5
CsaV3_5G013320 Cucumis sativus L. HOM05D001046 ORTHO05D007174 1.8e-17 91.7 52 84.6
TWI75G1880 Tripterygium wilfordii HOM05D001046 ORTHO05D007174 1.8e-17 91.7 52 86.5
Dinv14424 Davidia involucrata HOM05D001046 ORTHO05D007174 2.3e-17 91.3 52 88.5
Sc04g0005400 Simmondsia chinensis HOM05D001046 ORTHO05D007174 2.3e-17 91.3 52 86.5
CANSAT64G0447 Cannabis sativa HOM05D001046 ORTHO05D007174 3.0e-17 90.9 52 86.5
TAR622G0350 Trochodendron aralioides HOM05D001046 ORTHO05D007174 3.0e-17 90.9 52 86.5
EL10Ac1g02062 Beta vulgaris HOM05D001046 ORTHO05D007174 3.9e-17 90.5 52 86.5
Lalb_Chr16g0385001 Lupinus albus HOM05D001046 ORTHO05D007174 3.9e-17 90.5 50 86.0
Hund24973 Selenicereus undatus HOM05D001046 ORTHO05D007174 3.9e-17 90.5 52 86.5
Aqoxy3G00111 Aquilegia oxysepala HOM05D001046 ORTHO05D007174 5.1e-17 90.1 52 82.7
PGR119G0737 Punica granatum HOM05D001046 ORTHO05D007174 5.1e-17 90.1 52 84.6
Thhalv10000761m.g Eutrema salsugineum HOM05D001046 ORTHO05D007174 6.7e-17 89.7 52 84.6
Potri.008G130200 Populus trichocarpa HOM05D001046 ORTHO05D007174 6.7e-17 89.7 52 84.6
SEGI_20016 Sequoiadendron giganteum HOM05D001046 ORTHO05D007174 6.7e-17 89.7 52 82.7
unitig_699.g19534 Utricularia gibba HOM05D001046 ORTHO05D007174 6.7e-17 89.7 52 86.5
Cpa.g.sc65.149 Carica papaya HOM05D001046 ORTHO05D007174 8.8e-17 89.4 52 84.6
MELO3C018345.2 Cucumis melo HOM05D001046 ORTHO05D007174 8.8e-17 89.4 52 82.7
AT2G01460 Arabidopsis thaliana HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
BcaC03g17041 Brassica carinata HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
A02p31990 Brassica napus HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
C02p49560 Brassica napus HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
BolC2t11035H Brassica oleracea HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
BraA02t08210Z Brassica rapa HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
Carub.0005s0042 Capsella rubella HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
AUR62002755 Chenopodium quinoa HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 86.5
AUR62014179 Chenopodium quinoa HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 86.5
Lj6A745T54 Lonicera japonica HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
Sp2g12910 Schrenkiella parvula HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 84.6
GSVIVG01011746001 Vitis vinifera HOM05D001046 ORTHO05D007174 1.1e-16 89.0 52 86.5
CSS0021601 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D007174 1.5e-16 88.6 52 84.6
CSS0048168 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D007174 1.5e-16 88.6 52 84.6
COL.COLO4_13162 Corchorus olitorius HOM05D001046 ORTHO05D007174 1.5e-16 88.6 52 84.6
ECA234G2117 Erigeron canadensis HOM05D001046 ORTHO05D007174 1.5e-16 88.6 52 80.8
Gohir.D02G143700 Gossypium hirsutum HOM05D001046 ORTHO05D007174 1.5e-16 88.6 52 82.7
Gorai.005G161200 Gossypium raimondii HOM05D001046 ORTHO05D007174 1.5e-16 88.6 52 82.7
Oeu063607.3 Olea europaea HOM05D001046 ORTHO05D007174 1.5e-16 88.6 52 84.6
SalBow8G1368 Salvia bowleyana HOM05D001046 ORTHO05D007174 2.0e-16 88.2 52 82.7
SalBow8G3528 Salvia bowleyana HOM05D001046 ORTHO05D007174 2.0e-16 88.2 52 82.7
Sed0013317 Sechium edule HOM05D001046 ORTHO05D007174 2.0e-16 88.2 52 80.8
BcaB07g30397 Brassica carinata HOM05D001046 ORTHO05D007174 2.5e-16 87.8 52 82.7
CDE07G1190 Ceratophyllum demersum HOM05D001046 ORTHO05D007174 2.5e-16 87.8 52 84.6
Migut.E00432 Erythranthe guttata HOM05D001046 ORTHO05D007174 2.5e-16 87.8 52 82.7
Nitab4.5_0000688g0050 Nicotiana tabacum HOM05D001046 ORTHO05D007174 2.5e-16 87.8 52 84.6
PGSC0003DMG402018402 Solanum tuberosum HOM05D001046 ORTHO05D007174 2.5e-16 87.8 52 84.6
Thecc.02G282700 Theobroma cacao HOM05D001046 ORTHO05D007174 2.5e-16 87.8 52 82.7
vmacro00411 Vaccinium macrocarpon HOM05D001046 ORTHO05D007174 2.5e-16 87.8 52 84.6
MSTRG.13593 Avicennia marina HOM05D001046 ORTHO05D007174 3.3e-16 87.4 52 80.8
Gohir.A03G120500 Gossypium hirsutum HOM05D001046 ORTHO05D007174 3.3e-16 87.4 52 82.7
Rhsim09G0066100 Rhododendron simsii HOM05D001046 ORTHO05D007174 3.3e-16 87.4 52 82.7
CARHR143980 Cardamine hirsuta HOM05D001046 ORTHO05D007174 4.3e-16 87.0 52 82.7
Duzib268G1566 Durio zibethinus HOM05D001046 ORTHO05D007174 4.3e-16 87.0 52 82.7
THA.LOC104824139 Tarenaya hassleriana HOM05D001046 ORTHO05D007174 5.7e-16 86.7 52 80.8
Aa31LG2G8470 Aethionema arabicum HOM05D001046 ORTHO05D007174 7.4e-16 86.3 52 80.8
Cc11_g08540 Coffea canephora HOM05D001046 ORTHO05D007174 7.4e-16 86.3 52 82.7
Manes.15G128300 Manihot esculenta HOM05D001046 ORTHO05D007174 7.4e-16 86.3 52 80.8
Duzib251G0115 Durio zibethinus HOM05D001046 ORTHO05D007174 9.7e-16 85.9 52 78.8
Eucgr.G02183 Eucalyptus grandis HOM05D001046 ORTHO05D007174 1.3e-15 85.5 52 78.8
Solyc05g007990.4 Solanum lycopersicum HOM05D001046 ORTHO05D007174 1.3e-15 85.5 52 82.7
Sopen05g003840 Solanum pennellii HOM05D001046 ORTHO05D007174 1.3e-15 85.5 52 82.7
SGA_v2.0_scaffold257G45685 Striga asiatica HOM05D001046 ORTHO05D007174 1.3e-15 85.5 52 78.8
CAN.G1298.31 Capsicum annuum HOM05D001046 ORTHO05D007174 2.2e-15 84.7 52 80.8
Actinidia18443 Actinidia chinensis HOM05D001046 ORTHO05D007174 2.8e-15 84.3 52 78.8
PSO478G0704 Papaver somniferum HOM05D001046 ORTHO05D007174 3.7e-15 84.0 52 76.9
Peaxi162Scf00159g01020 Petunia axillaris HOM05D001046 ORTHO05D007174 3.7e-15 84.0 52 80.8
DCAR_030226 Daucus carota HOM05D001046 ORTHO05D007174 4.8e-15 83.6 52 80.8
Lsat_1_v5_gn_4_13960 Lactuca sativa HOM05D001046 ORTHO05D007174 4.8e-15 83.6 52 78.8
Os04g0280200 Oryza sativa ssp. japonica HOM05D001046 ORTHO05D007174 8.2e-15 82.8 52 75.0
HPP92_023398 Vanilla planifolia HOM05D001046 ORTHO05D007174 1.1e-14 82.4 52 76.9
HanXRQChr17g0566901 Helianthus annuus HOM05D001046 ORTHO05D007174 1.4e-14 82.0 52 75.0
ATR1102G048 Amborella trichopoda HOM05D001046 ORTHO05D007174 1.8e-14 81.6 52 73.1
SHI04600 Sapria himalayana HOM05D001046 ORTHO05D007174 1.7e-12 75.1 52 69.2
Pp3c20_690 Physcomitrium patens HOM05D001046 ORTHO05D007174 3.8e-12 73.9 52 67.3
Mapoly0011s0131 Marchantia polymorpha HOM05D001046 ORTHO05D007174 8.5e-12 72.8 50 72.0
AagrBONN_evm.TU.Sc2ySwM_228.2448 Anthoceros agrestis HOM05D001046 ORTHO05D007174 1.4e-11 72.0 50 68.0


User provided reference genes

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