Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26025 Trifolium pratense HOM05D006274 ORTHO05D007782 1.4e-96 356.3 188 100.0
Medtr3g100630 Medicago truncatula HOM05D006274 ORTHO05D007782 4.8e-84 314.7 180 91.1
Ca_22436_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 6.5e-81 304.3 185 88.1
Lj1g0015671 Lotus japonicus HOM05D006274 ORTHO05D007782 1.6e-74 283.1 186 80.1
Ca_15989_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 1.0e-70 270.4 152 92.1
Phvul.009G143300 Phaseolus vulgaris HOM05D006274 ORTHO05D007782 5.2e-70 268.1 187 79.7
VMungo1309G0647 Vigna mungo HOM05D006274 ORTHO05D007782 1.2e-69 266.9 188 78.7
Glyma.04G092700 Glycine max HOM05D006274 ORTHO05D007782 3.4e-69 265.4 182 79.1
Glyma.06G094500 Glycine max HOM05D006274 ORTHO05D007782 7.0e-67 257.7 168 79.8
Lalb_Chr08g0242401 Lupinus albus HOM05D006274 ORTHO05D007782 1.9e-64 249.6 177 77.4
TWI56G1401 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 3.0e-62 242.3 192 70.8
Haze_22342 Corylus avellana HOM05D006274 ORTHO05D007782 2.0e-61 239.6 181 71.3
Cfa013698 Carpinus fangiana HOM05D006274 ORTHO05D007782 2.6e-61 239.2 181 71.3
Ciclev10002605m.g Citrus clementina HOM05D006274 ORTHO05D007782 9.8e-61 237.3 183 71.6
TAR381G0542 Trochodendron aralioides HOM05D006274 ORTHO05D007782 1.3e-60 236.9 178 72.5
QL09p017221 Quercus lobata HOM05D006274 ORTHO05D007782 8.3e-60 234.2 197 69.0
Duzib116G0317 Durio zibethinus HOM05D006274 ORTHO05D007782 1.6e-58 229.9 182 68.1
Lsat_1_v5_gn_9_74940 Lactuca sativa HOM05D006274 ORTHO05D007782 2.7e-58 229.2 173 71.7
CiPaw.07G167900 Carya illinoinensis HOM05D006274 ORTHO05D007782 3.5e-58 228.8 188 66.5
Prupe.1G528000 Prunus persica HOM05D006274 ORTHO05D007782 7.8e-58 227.6 178 68.5
SalBow6G3082 Salvia bowleyana HOM05D006274 ORTHO05D007782 7.8e-58 227.6 179 68.7
Potri.002G103700 Populus trichocarpa HOM05D006274 ORTHO05D007782 1.7e-57 226.5 184 67.9
MBI02_g18284_MAGBIO Magnolia biondii HOM05D006274 ORTHO05D007782 2.3e-57 226.1 189 65.6
MSTRG.19530 Avicennia marina HOM05D006274 ORTHO05D007782 2.9e-57 225.7 181 66.9
Thecc.08G068200 Theobroma cacao HOM05D006274 ORTHO05D007782 2.9e-57 225.7 182 67.0
CSS0045542 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 3.8e-57 225.3 188 67.0
Cc10_g15630 Coffea canephora HOM05D006274 ORTHO05D007782 5.0e-57 224.9 179 67.0
Migut.J00587 Erythranthe guttata HOM05D006274 ORTHO05D007782 6.6e-57 224.6 178 67.4
CSS0028463 Camellia sinensis var. sinensis HOM05D006274 ORTHO05D007782 8.6e-57 224.2 188 66.0
HanXRQChr09g0249401 Helianthus annuus HOM05D006274 ORTHO05D007782 1.1e-56 223.8 172 71.5
ECA232G3909 Erigeron canadensis HOM05D006274 ORTHO05D007782 1.5e-56 223.4 176 68.8
Manes.18G061000 Manihot esculenta HOM05D006274 ORTHO05D007782 4.3e-56 221.9 182 65.9
C04p15430 Brassica napus HOM05D006274 ORTHO05D007782 7.3e-56 221.1 177 68.9
PGR031G0701 Punica granatum HOM05D006274 ORTHO05D007782 7.3e-56 221.1 186 66.7
Oeu024592.1 Olea europaea HOM05D006274 ORTHO05D007782 9.5e-56 220.7 175 66.9
MD08G1193500 Malus domestica HOM05D006274 ORTHO05D007782 1.2e-55 220.3 182 64.8
MD15G1382000 Malus domestica HOM05D006274 ORTHO05D007782 1.2e-55 220.3 182 65.4
Gohir.D06G032400 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.6e-55 219.9 182 65.4
BolC4t23114H Brassica oleracea HOM05D006274 ORTHO05D007782 2.1e-55 219.5 178 68.0
THA.LOC104814210 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 2.8e-55 219.2 194 64.9
Hma1.2p1_0010F.1_g006970 Hydrangea macrophylla HOM05D006274 ORTHO05D007782 3.6e-55 218.8 181 65.2
BcaC02g11449 Brassica carinata HOM05D006274 ORTHO05D007782 4.7e-55 218.4 178 68.0
A05p11860 Brassica napus HOM05D006274 ORTHO05D007782 8.0e-55 217.6 178 67.4
Gorai.010G035700 Gossypium raimondii HOM05D006274 ORTHO05D007782 8.0e-55 217.6 182 64.8
Hund27007 Selenicereus undatus HOM05D006274 ORTHO05D007782 8.0e-55 217.6 181 65.7
Sed0009042 Sechium edule HOM05D006274 ORTHO05D007782 1.4e-54 216.9 175 65.7
Solyc04g076050.4 Solanum lycopersicum HOM05D006274 ORTHO05D007782 1.4e-54 216.9 175 66.3
PGSC0003DMG400012912 Solanum tuberosum HOM05D006274 ORTHO05D007782 1.4e-54 216.9 175 66.3
Aa31LG9G13640 Aethionema arabicum HOM05D006274 ORTHO05D007782 2.3e-54 216.1 195 64.6
BcaB02g10587 Brassica carinata HOM05D006274 ORTHO05D007782 2.3e-54 216.1 176 67.0
PSO210G3104 Papaver somniferum HOM05D006274 ORTHO05D007782 2.3e-54 216.1 173 68.8
Sopen00g007030 Solanum pennellii HOM05D006274 ORTHO05D007782 2.3e-54 216.1 176 65.9
Sopen00g007710 Solanum pennellii HOM05D006274 ORTHO05D007782 2.3e-54 216.1 176 65.9
GSVIVG01009140001 Vitis vinifera HOM05D006274 ORTHO05D007782 2.3e-54 216.1 164 72.6
Actinidia19642 Actinidia chinensis HOM05D006274 ORTHO05D007782 5.2e-54 214.9 181 65.2
BraA05t20127Z Brassica rapa HOM05D006274 ORTHO05D007782 6.8e-54 214.5 177 67.2
CsaV3_2G030110 Cucumis sativus L. HOM05D006274 ORTHO05D007782 6.8e-54 214.5 183 63.9
unitig_26.g9169 Utricularia gibba HOM05D006274 ORTHO05D007782 8.9e-54 214.2 173 67.6
Thhalv10017289m.g Eutrema salsugineum HOM05D006274 ORTHO05D007782 1.2e-53 213.8 177 66.1
Nn5g29933 Nelumbo nucifera HOM05D006274 ORTHO05D007782 1.5e-53 213.4 177 66.7
CARHR127760 Cardamine hirsuta HOM05D006274 ORTHO05D007782 5.7e-53 211.5 172 69.8
Dinv44839 Davidia involucrata HOM05D006274 ORTHO05D007782 5.7e-53 211.5 188 64.9
Aqoxy5G01327 Aquilegia oxysepala HOM05D006274 ORTHO05D007782 7.5e-53 211.1 175 66.3
EL10Ac1g01111 Beta vulgaris HOM05D006274 ORTHO05D007782 7.5e-53 211.1 198 62.6
SGA_v2.0_scaffold10G05208 Striga asiatica HOM05D006274 ORTHO05D007782 2.2e-52 209.5 181 65.2
Carub.0004s1538 Capsella rubella HOM05D006274 ORTHO05D007782 2.9e-52 209.1 169 68.6
ClCG08G011520 Citrullus lanatus HOM05D006274 ORTHO05D007782 2.9e-52 209.1 199 57.8
AL4G29430 Arabidopsis lyrata HOM05D006274 ORTHO05D007782 4.9e-52 208.4 171 69.6
PSO170G6492 Papaver somniferum HOM05D006274 ORTHO05D007782 4.9e-52 208.4 172 68.6
Nitab4.5_0010618g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 6.4e-52 208.0 177 67.2
THA.LOC104820685 Tarenaya hassleriana HOM05D006274 ORTHO05D007782 8.3e-52 207.6 186 63.4
FAN04G0860 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.4e-51 206.8 181 62.4
RcHm_v2.0_Chr7g0237451 Rosa chinensis HOM05D006274 ORTHO05D007782 1.8e-51 206.5 188 60.1
arahy.Tifrunner.gnm1.ann1.44X20L Arachis hypogaea HOM05D006274 ORTHO05D007782 4.1e-51 205.3 153 75.2
FvH4_5g35790 Fragaria vesca HOM05D006274 ORTHO05D007782 4.1e-51 205.3 184 59.8
AT2G33740 Arabidopsis thaliana HOM05D006274 ORTHO05D007782 7.0e-51 204.5 187 66.3
Nn1g05513 Nelumbo nucifera HOM05D006274 ORTHO05D007782 7.0e-51 204.5 164 67.1
Sc01g0001050 Simmondsia chinensis HOM05D006274 ORTHO05D007782 9.2e-51 204.1 179 60.3
vmacro04670 Vaccinium macrocarpon HOM05D006274 ORTHO05D007782 9.2e-51 204.1 209 58.9
Psat5g045880 Pisum sativum HOM05D006274 ORTHO05D007782 1.2e-50 203.8 146 80.1
Sp4g16090 Schrenkiella parvula HOM05D006274 ORTHO05D007782 1.2e-50 203.8 179 65.4
arahy.Tifrunner.gnm1.ann1.SMA5HD Arachis hypogaea HOM05D006274 ORTHO05D007782 1.6e-50 203.4 140 77.9
FAN18G0017 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.6e-50 203.4 184 60.3
Peaxi162Scf00281g00415 Petunia axillaris HOM05D006274 ORTHO05D007782 1.6e-50 203.4 168 65.5
TWI12G0161 Tripterygium wilfordii HOM05D006274 ORTHO05D007782 2.7e-50 202.6 131 79.4
Eucgr.F02129 Eucalyptus grandis HOM05D006274 ORTHO05D007782 1.3e-49 200.3 183 61.7
CDE10G0432 Ceratophyllum demersum HOM05D006274 ORTHO05D007782 8.6e-49 197.6 173 62.4
Sabra02G0081200 Salix brachista HOM05D006274 ORTHO05D007782 1.1e-48 197.2 240 51.7
Gohir.A06G032628 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.9e-48 196.4 171 63.7
ATR0022G028 Amborella trichopoda HOM05D006274 ORTHO05D007782 2.5e-48 196.1 175 63.4
Dinv42635 Davidia involucrata HOM05D006274 ORTHO05D007782 4.3e-48 195.3 184 62.5
MELO3C011069.2 Cucumis melo HOM05D006274 ORTHO05D007782 7.3e-48 194.5 201 57.7
Zm00001eb006540 Zea mays HOM05D006274 ORTHO05D007782 2.8e-47 192.6 165 62.4
Cpa.g.sc309.7 Carica papaya HOM05D006274 ORTHO05D007782 1.4e-46 190.3 178 60.1
Os10g0378300 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 3.1e-46 189.1 110 82.7
Os03g0186950 Oryza sativa ssp. japonica HOM05D006274 ORTHO05D007782 8.9e-46 187.6 167 61.1
Gohir.A05G218200 Gossypium hirsutum HOM05D006274 ORTHO05D007782 1.2e-45 187.2 181 58.6
Hund16871 Selenicereus undatus HOM05D006274 ORTHO05D007782 1.2e-45 187.2 190 58.4
MSTRG.6044 Avicennia marina HOM05D006274 ORTHO05D007782 2.0e-45 186.4 111 81.1
DCAR_012863 Daucus carota HOM05D006274 ORTHO05D007782 2.6e-45 186.0 110 81.8
AUR62019013 Chenopodium quinoa HOM05D006274 ORTHO05D007782 3.4e-45 185.7 111 82.9
AUR62027854 Chenopodium quinoa HOM05D006274 ORTHO05D007782 9.8e-45 184.1 111 81.1
Sopen00g004300 Solanum pennellii HOM05D006274 ORTHO05D007782 9.8e-45 184.1 109 80.7
Gorai.009G231100 Gossypium raimondii HOM05D006274 ORTHO05D007782 2.2e-44 183.0 173 59.5
Nitab4.5_0001507g0040 Nicotiana tabacum HOM05D006274 ORTHO05D007782 2.7e-42 176.0 177 59.3
CAN.G1658.2 Capsicum annuum HOM05D006274 ORTHO05D007782 6.0e-42 174.9 115 75.7
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.0e-41 172.6 163 57.7
Actinidia29612 Actinidia chinensis HOM05D006274 ORTHO05D007782 1.1e-40 170.6 173 60.1
Gohir.D05G223833 Gossypium hirsutum HOM05D006274 ORTHO05D007782 2.0e-37 159.8 175 54.9
FAN13G2708 Fragaria x ananassa HOM05D006274 ORTHO05D007782 1.1e-35 154.1 92 78.3
FAN08G3216 Fragaria x ananassa HOM05D006274 ORTHO05D007782 9.2e-35 151.0 92 77.2
HPP92_002219 Vanilla planifolia HOM05D006274 ORTHO05D007782 1.2e-34 150.6 88 80.7
SMO119G0339 Selaginella moellendorffii HOM05D006274 ORTHO05D007782 2.1e-34 149.8 103 68.0
Atru.chr13.1045 Acer truncatum HOM05D006274 ORTHO05D007782 2.7e-34 149.4 105 77.1
Mapoly0011s0077 Marchantia polymorpha HOM05D006274 ORTHO05D007782 5.1e-33 145.2 132 54.5
Sed0010188 Sechium edule HOM05D006274 ORTHO05D007782 1.5e-32 143.7 92 77.2
SEGI_16140 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 1.5e-29 133.7 90 71.1
SEGI_33866 Sequoiadendron giganteum HOM05D006274 ORTHO05D007782 5.8e-29 131.7 100 60.0
CBR_g39263 Chara braunii HOM05D002374 ORTHO05D003594 1.3e-28 130.6 101 59.4
Cre02.g082350 Chlamydomonas reinhardtii HOM05D006274 ORTHO05D007782 1.9e-27 126.7 99 58.6
CANSAT64G0910 Cannabis sativa HOM05D006274 ORTHO05D007782 1.2e-26 124.0 128 58.6
PRCOL_00002052 Prasinoderma coloniale HOM05D006274 ORTHO05D007782 2.1e-26 123.2 97 57.7
Rhsim07G0210300 Rhododendron simsii HOM05D006274 ORTHO05D007782 4.6e-26 122.1 70 80.0
EL10Ac9g22466 Beta vulgaris HOM05D006274 ORTHO05D007782 9.6e-24 114.4 70 74.3
Pp3c21_2600 Physcomitrium patens HOM05D006274 ORTHO05D007782 1.2e-23 114.0 129 48.1
AagrBONN_evm.TU.Sc2ySwM_228.3755 Anthoceros agrestis HOM05D006274 ORTHO05D007782 6.2e-23 111.7 81 65.4
CBR_g7959 Chara braunii HOM05D006274 ORTHO05D007782 2.4e-19 99.8 92 56.5
Medtr4g010890 Medicago truncatula HOM05D006274 ORTHO05D007782 1.9e-11 73.6 55 78.2
Ca_28793_v3 Cicer arietinum L. HOM05D006274 ORTHO05D007782 2.3e-09 66.6 85 36.5


User provided reference genes

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