Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26006 Trifolium pratense HOM05D001219 ORTHO05D001017 2.7e-40 168.3 92 100.0
Medtr8g076010 Medicago truncatula HOM05D001219 ORTHO05D001017 1.7e-18 95.9 74 66.2
Medtr5g075860 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-17 93.2 74 62.2
Medtr5g095830 Medicago truncatula HOM05D001219 ORTHO05D001017 7.2e-17 90.5 76 57.9
TPR.G26002 Trifolium pratense HOM05D001219 ORTHO05D001017 9.5e-17 90.1 75 57.3
Medtr8g446780 Medicago truncatula HOM05D001219 ORTHO05D001017 6.1e-16 87.4 74 56.8
Medtr3g110150 Medicago truncatula HOM05D001219 ORTHO05D001017 1.0e-15 86.7 74 62.2
TPR.G15122 Trifolium pratense HOM05D001219 ORTHO05D001017 1.0e-15 86.7 74 54.1
Ca_06859_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.8e-15 85.9 81 51.9
Medtr3g006050 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-15 85.9 74 58.1
TPR.G38710 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-15 85.5 76 56.6
TPR.G25741 Trifolium pratense HOM05D001219 ORTHO05D001017 4.0e-15 84.7 74 54.1
Medtr4g008340 Medicago truncatula HOM05D001219 ORTHO05D001017 5.2e-15 84.3 74 50.0
TPR.G25998 Trifolium pratense HOM05D001219 ORTHO05D001017 5.2e-15 84.3 74 55.4
Medtr4g008400 Medicago truncatula HOM05D001219 ORTHO05D001017 6.8e-15 84.0 64 60.9
Medtr4g132730 Medicago truncatula HOM05D001219 ORTHO05D001017 6.8e-15 84.0 74 59.5
Medtr4g006240 Medicago truncatula HOM05D001219 ORTHO05D001017 8.8e-15 83.6 74 59.5
Medtr4g008420 Medicago truncatula HOM05D001219 ORTHO05D001017 8.8e-15 83.6 74 59.5
TPR.G15724 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-14 83.2 74 58.1
Ca_07189_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 2.0e-14 82.4 81 49.4
TPR.G9338 Trifolium pratense HOM05D001219 ORTHO05D001017 3.4e-14 81.6 82 48.8
Medtr4g024220 Medicago truncatula HOM05D001219 ORTHO05D001017 4.4e-14 81.3 76 55.3
Medtr4g008330 Medicago truncatula HOM05D001219 ORTHO05D001017 5.7e-14 80.9 74 55.4
Medtr4g021835 Medicago truncatula HOM05D001219 ORTHO05D001017 5.7e-14 80.9 76 57.9
Medtr4g008490 Medicago truncatula HOM05D001219 ORTHO05D001017 7.5e-14 80.5 75 56.0
TPR.G31141 Trifolium pratense HOM05D001219 ORTHO05D001017 9.8e-14 80.1 74 55.4
Medtr6g042905 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-13 79.7 65 63.1
Medtr6g080560 Medicago truncatula HOM05D001219 ORTHO05D001017 1.3e-13 79.7 72 55.6
Medtr5g087540 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-13 79.0 74 52.7
Medtr5g088250 Medicago truncatula HOM05D001219 ORTHO05D001017 2.2e-13 79.0 74 54.1
TPR.G15706 Trifolium pratense HOM05D001219 ORTHO05D001017 2.8e-13 78.6 77 57.1
Medtr3g074570 Medicago truncatula HOM05D001219 ORTHO05D001017 3.7e-13 78.2 74 55.4
Psat3g054280 Pisum sativum HOM05D001219 ORTHO05D001017 4.9e-13 77.8 79 50.6
Psat0s538g0040 Pisum sativum HOM05D001219 ORTHO05D001017 6.3e-13 77.4 74 51.4
TPR.G15726 Trifolium pratense HOM05D001219 ORTHO05D001017 6.3e-13 77.4 70 57.1
Medtr1g023530 Medicago truncatula HOM05D001219 ORTHO05D001017 8.3e-13 77.0 65 60.0
Medtr2g104970 Medicago truncatula HOM05D001219 ORTHO05D001017 8.3e-13 77.0 50 74.0
TPR.G15180 Trifolium pratense HOM05D001219 ORTHO05D001017 8.3e-13 77.0 74 56.8
Psat3g054040 Pisum sativum HOM05D001219 ORTHO05D001017 1.1e-12 76.6 77 51.9
Psat3g054120 Pisum sativum HOM05D001219 ORTHO05D001017 1.1e-12 76.6 77 51.9
Psat3g055200 Pisum sativum HOM05D001219 ORTHO05D001017 1.4e-12 76.3 77 54.5
Medtr2g103530 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-12 75.5 65 52.3
Medtr4g435338 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-12 75.5 74 55.4
Medtr8g067230 Medicago truncatula HOM05D001219 ORTHO05D001017 2.4e-12 75.5 50 74.0
TPR.G15128 Trifolium pratense HOM05D001219 ORTHO05D001017 2.4e-12 75.5 50 74.0
Medtr8g060730 Medicago truncatula HOM05D001219 ORTHO05D001017 3.1e-12 75.1 50 72.0
Psat3g054200 Pisum sativum HOM05D001219 ORTHO05D001017 3.1e-12 75.1 74 51.4
Psat7g261360 Pisum sativum HOM05D001219 ORTHO05D001017 3.1e-12 75.1 70 55.7
TPR.G16396 Trifolium pratense HOM05D001219 ORTHO05D001017 3.1e-12 75.1 74 50.0
TPR.G37654 Trifolium pratense HOM05D001219 ORTHO05D001017 3.1e-12 75.1 74 50.0
TPR.G38777 Trifolium pratense HOM05D001219 ORTHO05D001017 3.1e-12 75.1 71 52.1
Medtr3g083280 Medicago truncatula HOM05D001219 ORTHO05D001017 4.1e-12 74.7 74 52.7
Medtr4g008450 Medicago truncatula HOM05D001219 ORTHO05D001017 5.4e-12 74.3 74 52.7
Psat7g041280 Pisum sativum HOM05D001219 ORTHO05D001017 5.4e-12 74.3 74 50.0
Psat7g261440 Pisum sativum HOM05D001219 ORTHO05D001017 5.4e-12 74.3 74 50.0
Psat7g261520 Pisum sativum HOM05D001219 ORTHO05D001017 5.4e-12 74.3 74 48.6
Medtr3g074550 Medicago truncatula HOM05D001219 ORTHO05D001017 7.0e-12 73.9 79 50.6
Psat3g055240 Pisum sativum HOM05D001219 ORTHO05D001017 7.0e-12 73.9 74 51.4
TPR.G15124 Trifolium pratense HOM05D001219 ORTHO05D001017 7.0e-12 73.9 76 46.1
Medtr6g022820 Medicago truncatula HOM05D001219 ORTHO05D001017 9.2e-12 73.6 50 70.0
TPR.G29719 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-11 73.2 79 48.1
TPR.G9688 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-11 73.2 68 52.9
Medtr1g115380 Medicago truncatula HOM05D001219 ORTHO05D001017 1.6e-11 72.8 73 50.7
Medtr6g016705 Medicago truncatula HOM05D001219 ORTHO05D001017 1.6e-11 72.8 50 68.0
TPR.G29727 Trifolium pratense HOM05D001219 ORTHO05D001017 1.6e-11 72.8 75 52.0
Ca_04901_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 2.0e-11 72.4 73 49.3
Medtr1g050478 Medicago truncatula HOM05D001219 ORTHO05D001017 2.0e-11 72.4 50 70.0
Medtr6g027420 Medicago truncatula HOM05D001219 ORTHO05D001017 2.0e-11 72.4 74 63.5
Medtr4g008380 Medicago truncatula HOM05D001219 ORTHO05D001017 2.7e-11 72.0 70 54.3
Psat7g261480 Pisum sativum HOM05D001219 ORTHO05D001017 2.7e-11 72.0 74 48.6
Medtr4g006280 Medicago truncatula HOM05D001219 ORTHO05D001017 3.5e-11 71.6 74 51.4
Medtr5g430490 Medicago truncatula HOM05D001219 ORTHO05D001017 3.5e-11 71.6 49 71.4
Medtr6g016900 Medicago truncatula HOM05D001219 ORTHO05D001017 3.5e-11 71.6 50 70.0
TPR.G18440 Trifolium pratense HOM05D001219 ORTHO05D001017 3.5e-11 71.6 70 52.9
TPR.G29931 Trifolium pratense HOM05D001219 ORTHO05D001017 3.5e-11 71.6 70 50.0
Ca_20557_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 5.9e-11 70.9 74 50.0
Ca_30909_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 5.9e-11 70.9 74 50.0
Medtr6g054950 Medicago truncatula HOM05D001219 ORTHO05D001017 5.9e-11 70.9 50 68.0
TPR.G8602 Trifolium pratense HOM05D001219 ORTHO05D001017 5.9e-11 70.9 50 74.0
Medtr2g007590 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-11 70.5 50 68.0
Medtr4g133640 Medicago truncatula HOM05D001219 ORTHO05D001017 7.8e-11 70.5 50 68.0
TPR.G9694 Trifolium pratense HOM05D001219 ORTHO05D001017 7.8e-11 70.5 50 66.0
Lalb_Chr01g0012921 Lupinus albus HOM05D001219 ORTHO05D001017 1.0e-10 70.1 74 47.3
Medtr4g024200 Medicago truncatula HOM05D001219 ORTHO05D001017 1.7e-10 69.3 74 62.2
Medtr7g044870 Medicago truncatula HOM05D001219 ORTHO05D001017 1.7e-10 69.3 64 56.2
TPR.G29726 Trifolium pratense HOM05D001219 ORTHO05D001017 1.7e-10 69.3 71 53.5
TPR.G6402 Trifolium pratense HOM05D001219 ORTHO05D001017 1.7e-10 69.3 74 44.6
TPR.G9967 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-10 68.9 50 70.0
Medtr3g081260 Medicago truncatula HOM05D001219 ORTHO05D001017 2.9e-10 68.6 69 50.7
Medtr4g006290 Medicago truncatula HOM05D001219 ORTHO05D001017 2.9e-10 68.6 50 68.0
VMungo0331G0655 Vigna mungo HOM05D001219 ORTHO05D001017 2.9e-10 68.6 74 50.0
TPR.G15685 Trifolium pratense HOM05D001219 ORTHO05D001017 3.8e-10 68.2 74 45.9
TPR.G16304 Trifolium pratense HOM05D001219 ORTHO05D001017 3.8e-10 68.2 49 65.3
Medtr7g029535 Medicago truncatula HOM05D001219 ORTHO05D001017 5.0e-10 67.8 50 64.0
TPR.G18547 Trifolium pratense HOM05D001219 ORTHO05D001017 5.0e-10 67.8 73 46.6
Medtr3g008790 Medicago truncatula HOM05D001219 ORTHO05D001017 6.6e-10 67.4 67 52.2
TPR.G29730 Trifolium pratense HOM05D001219 ORTHO05D001017 6.6e-10 67.4 75 49.3
Medtr4g019320 Medicago truncatula HOM05D001219 ORTHO05D001017 8.6e-10 67.0 76 44.7
Medtr6g025290 Medicago truncatula HOM05D001219 ORTHO05D001017 8.6e-10 67.0 66 53.0
TPR.G17814 Trifolium pratense HOM05D001219 ORTHO05D001017 8.6e-10 67.0 49 67.3
Medtr6g016910 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-09 66.6 66 53.0
Medtr6g016915 Medicago truncatula HOM05D001219 ORTHO05D001017 1.1e-09 66.6 50 66.0
Medtr6g018570 Medicago truncatula HOM05D001243 ORTHO05D000843 1.1e-09 66.6 66 53.0
Psat3g012240 Pisum sativum HOM05D001219 ORTHO05D001017 1.1e-09 66.6 70 58.6
Psat7g258720 Pisum sativum HOM05D001219 ORTHO05D001017 1.1e-09 66.6 74 47.3
TPR.G22697 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-09 66.2 49 63.3
TPR.G29733 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-09 66.2 74 48.6
TPR.G38812 Trifolium pratense HOM05D001219 ORTHO05D001017 1.5e-09 66.2 47 66.0
Ciclev10027319m.g Citrus clementina HOM05D001219 ORTHO05D001017 1.9e-09 65.9 74 45.9
Medtr8g017160 Medicago truncatula HOM05D001219 ORTHO05D001017 1.9e-09 65.9 56 53.6
Psat0s1674g0080 Pisum sativum HOM05D001219 ORTHO05D001017 1.9e-09 65.9 50 64.0
Psat3g054360 Pisum sativum HOM05D001219 ORTHO05D001017 1.9e-09 65.9 74 51.4
TPR.G22462 Trifolium pratense HOM05D001219 ORTHO05D001017 2.5e-09 65.5 47 63.8
Medtr0807s0010 Medicago truncatula HOM05D001219 ORTHO05D001017 4.3e-09 64.7 66 56.1
Phvul.010G159200 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 4.3e-09 64.7 74 50.0
TPR.G9682 Trifolium pratense HOM05D001219 ORTHO05D001017 4.3e-09 64.7 49 65.3
Medtr5g046730 Medicago truncatula HOM05D001219 ORTHO05D001017 5.6e-09 64.3 50 60.0
TPR.G29721 Trifolium pratense HOM05D001219 ORTHO05D001017 5.6e-09 64.3 79 45.6
TPR.G37434 Trifolium pratense HOM05D001219 ORTHO05D001017 5.6e-09 64.3 49 65.3
Medtr3g465770 Medicago truncatula HOM05D001219 ORTHO05D001017 7.3e-09 63.9 72 48.6
Prupe.3G095400 Prunus persica HOM05D001219 ORTHO05D001017 7.3e-09 63.9 72 44.4
TPR.G21482 Trifolium pratense HOM05D001219 ORTHO05D001017 7.3e-09 63.9 65 52.3
Medtr8g037780 Medicago truncatula HOM05D001219 ORTHO05D001017 9.5e-09 63.5 56 51.8
TPR.G22352 Trifolium pratense HOM05D001219 ORTHO05D001017 9.5e-09 63.5 72 50.0
TPR.G18559 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-08 63.2 73 45.2
TPR.G29734 Trifolium pratense HOM05D001219 ORTHO05D001017 1.2e-08 63.2 49 63.3
Medtr4g005810 Medicago truncatula HOM05D001219 ORTHO05D001017 1.6e-08 62.8 50 64.0
TPR.G38795 Trifolium pratense HOM05D001219 ORTHO05D001017 1.6e-08 62.8 54 57.4
Psat3g051760 Pisum sativum HOM05D001219 ORTHO05D001017 2.1e-08 62.4 74 50.0
TPR.G1111 Trifolium pratense HOM05D001219 ORTHO05D001017 2.1e-08 62.4 64 56.2
Medtr4g009030 Medicago truncatula HOM05D001219 ORTHO05D001017 2.8e-08 62.0 74 44.6
TPR.G29724 Trifolium pratense HOM05D001219 ORTHO05D001017 2.8e-08 62.0 79 45.6
TPR.G26304 Trifolium pratense HOM05D001219 ORTHO05D001017 3.6e-08 61.6 37 83.8
TPR.G29908 Trifolium pratense HOM05D001219 ORTHO05D001017 3.6e-08 61.6 50 66.0
Medtr0295s0010 Medicago truncatula HOM05D001219 ORTHO05D001017 4.7e-08 61.2 45 66.7
Medtr1g115390 Medicago truncatula HOM05D001219 ORTHO05D001017 4.7e-08 61.2 50 58.0
TPR.G21219 Trifolium pratense HOM05D001219 ORTHO05D001017 4.7e-08 61.2 63 52.4
arahy.Tifrunner.gnm1.ann1.2F3432 Arachis hypogaea HOM05D001219 ORTHO05D001017 1.0e-07 60.1 74 54.1
Phvul.010G159100 Phaseolus vulgaris HOM05D001219 ORTHO05D001017 1.0e-07 60.1 74 43.2
QL05p034226 Quercus lobata HOM05D001219 ORTHO05D001017 1.0e-07 60.1 72 47.2
Ca_30910_v3 Cicer arietinum L. HOM05D001219 ORTHO05D001017 1.4e-07 59.7 74 44.6
COL.COLO4_26644 Corchorus olitorius HOM05D001219 ORTHO05D001017 1.4e-07 59.7 73 41.1
Nn8g39731 Nelumbo nucifera HOM05D001219 ORTHO05D001017 1.4e-07 59.7 75 42.7
Psat7g261760 Pisum sativum HOM05D001219 ORTHO05D001017 1.4e-07 59.7 48 64.6
Potri.003G179100 Populus trichocarpa HOM05D001219 ORTHO05D001017 1.4e-07 59.7 74 43.2
THA.LOC104812449 Tarenaya hassleriana HOM05D001219 ORTHO05D001017 1.4e-07 59.7 67 44.8
TPR.G1358 Trifolium pratense HOM05D001219 ORTHO05D001017 1.4e-07 59.7 65 49.2
Medtr8g045150 Medicago truncatula HOM05D001219 ORTHO05D001017 1.8e-07 59.3 74 59.5
arahy.Tifrunner.gnm1.ann1.F6HDT7 Arachis hypogaea HOM05D001219 ORTHO05D001017 2.3e-07 58.9 74 40.5
arahy.Tifrunner.gnm1.ann1.JW8Z9M Arachis hypogaea HOM05D001219 ORTHO05D001017 2.3e-07 58.9 74 40.5
Glyma.08G216300 Glycine max HOM05D001219 ORTHO05D001017 2.3e-07 58.9 74 43.2
TPR.G18060 Trifolium pratense HOM05D001219 ORTHO05D001017 2.3e-07 58.9 47 53.2
Carub.0002s2711 Capsella rubella HOM05D001219 ORTHO05D001017 4.0e-07 58.2 71 43.7
Lj3g0020556 Lotus japonicus HOM05D001219 ORTHO05D001017 4.0e-07 58.2 74 40.5
Medtr0041s0060 Medicago truncatula HOM05D001219 ORTHO05D001017 4.0e-07 58.2 44 63.6
TPR.G38803 Trifolium pratense HOM05D001219 ORTHO05D001017 4.0e-07 58.2 48 56.2
AT1G80630 Arabidopsis thaliana HOM05D001219 ORTHO05D001017 6.8e-07 57.4 67 44.8
Lalb_Chr25g0279201 Lupinus albus HOM05D001219 ORTHO05D001017 6.8e-07 57.4 72 41.7
Medtr4g006250 Medicago truncatula HOM05D001219 ORTHO05D015710 6.8e-07 57.4 43 69.8
Medtr4g008440 Medicago truncatula HOM05D001219 ORTHO05D001017 6.8e-07 57.4 46 56.5
TPR.G19224 Trifolium pratense HOM05D001219 ORTHO05D001017 6.8e-07 57.4 80 43.8
TPR.G9875 Trifolium pratense HOM05D001219 ORTHO05D001017 6.8e-07 57.4 63 49.2
AL2G40810 Arabidopsis lyrata HOM05D001219 ORTHO05D001017 8.9e-07 57.0 67 44.8
Medtr4g021765 Medicago truncatula HOM05D001219 ORTHO05D001017 8.9e-07 57.0 43 67.4
TPR.G8970 Trifolium pratense HOM05D001219 ORTHO05D001017 8.9e-07 57.0 63 49.2
Duzib235G0909 Durio zibethinus HOM05D001219 ORTHO05D001017 1.2e-06 56.6 74 41.9
Medtr6g016740 Medicago truncatula HOM05D001219 ORTHO05D001017 1.5e-06 56.2 43 65.1
Lj3g0021602 Lotus japonicus HOM05D001219 ORTHO05D001017 2.0e-06 55.8 71 42.3
TPR.G31991 Trifolium pratense HOM05D001219 ORTHO05D001017 2.0e-06 55.8 69 43.5
Medtr1g028400 Medicago truncatula HOM05D001219 ORTHO05D001017 2.6e-06 55.5 59 47.5
arahy.Tifrunner.gnm1.ann1.XM9YH2 Arachis hypogaea HOM05D001219 ORTHO05D001017 3.4e-06 55.1 47 55.3
A07p45070 Brassica napus HOM05D001219 ORTHO05D001017 3.4e-06 55.1 67 41.8
Duzib106G0373 Durio zibethinus HOM05D001219 ORTHO05D001017 3.4e-06 55.1 78 39.7
Duzib106G0874 Durio zibethinus HOM05D001219 ORTHO05D001017 4.4e-06 54.7 94 34.0
Peaxi162Scf00332g00225 Petunia axillaris HOM05D001219 ORTHO05D001017 4.4e-06 54.7 64 40.6
TPR.G23081 Trifolium pratense HOM05D001219 ORTHO05D001017 4.4e-06 54.7 49 55.1
Manes.04G105600 Manihot esculenta HOM05D001219 ORTHO05D001017 5.7e-06 54.3 49 53.1
arahy.Tifrunner.gnm1.ann1.6H8B8Z Arachis hypogaea HOM05D001219 ORTHO05D001017 7.5e-06 53.9 74 39.2
arahy.Tifrunner.gnm1.ann1.T7YMEL Arachis hypogaea HOM05D001219 ORTHO05D001017 7.5e-06 53.9 49 57.1
AUR62013441 Chenopodium quinoa HOM05D001219 ORTHO05D001017 7.5e-06 53.9 69 42.0
COL.COLO4_03340 Corchorus olitorius HOM05D001219 ORTHO05D001017 7.5e-06 53.9 79 36.7
Medtr4g008470 Medicago truncatula HOM05D001219 ORTHO05D001017 7.5e-06 53.9 38 68.4
VMungo0331G0565 Vigna mungo HOM05D001219 ORTHO05D001017 7.5e-06 53.9 74 39.2
Aa31LG4G910 Aethionema arabicum HOM05D001219 ORTHO05D001017 9.8e-06 53.5 66 43.9
C06p53900 Brassica napus HOM05D001219 ORTHO05D001017 9.8e-06 53.5 66 42.4


User provided reference genes

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