Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 5.0e-162 574.7 365 100.0
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 5.8e-150 534.6 297 93.9
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 3.3e-145 518.8 297 91.9
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 2.8e-144 515.8 297 90.2
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.1e-143 513.8 297 89.6
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 1.7e-141 506.5 298 88.9
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 1.4e-140 503.4 297 87.5
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 1.9e-140 503.1 297 88.6
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 8.6e-138 494.2 297 87.2
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 1.4e-135 486.9 297 87.2
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 9.6e-129 464.2 298 81.2
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 9.6e-129 464.2 297 81.8
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 1.2e-128 463.8 299 81.6
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 4.7e-128 461.8 298 80.9
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.4e-127 460.3 298 81.2
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 1.2e-126 457.2 297 79.8
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.5e-126 456.8 298 80.9
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 1.5e-126 456.8 298 79.2
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.0e-126 456.4 299 79.9
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 2.0e-126 456.4 298 78.9
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 2.6e-126 456.1 299 80.3
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 4.4e-126 455.3 298 79.5
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 4.4e-126 455.3 298 80.2
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 9.9e-126 454.1 298 79.9
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 1.3e-125 453.8 298 79.9
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.9e-125 452.6 298 79.5
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 2.9e-125 452.6 298 79.5
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 3.8e-125 452.2 298 80.2
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 4.9e-125 451.8 297 79.1
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 6.4e-125 451.4 297 80.1
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 6.4e-125 451.4 297 79.1
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 8.4e-125 451.1 298 78.9
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 1.1e-124 450.7 298 78.5
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.4e-124 450.3 298 78.2
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 2.4e-124 449.5 298 78.2
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 3.2e-124 449.1 299 77.9
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 4.2e-124 448.7 298 80.5
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 4.2e-124 448.7 298 78.2
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 4.2e-124 448.7 298 79.2
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 5.4e-124 448.4 298 77.5
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 5.4e-124 448.4 298 78.5
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 7.1e-124 448.0 298 79.9
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 7.1e-124 448.0 299 77.9
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 9.3e-124 447.6 298 79.5
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 1.6e-123 446.8 312 76.9
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 1.6e-123 446.8 298 79.2
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 3.5e-123 445.7 298 77.9
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 4.6e-123 445.3 299 77.6
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.0e-122 444.1 298 77.2
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.0e-122 444.1 298 78.5
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 1.0e-122 444.1 298 78.5
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 1.7e-122 443.4 296 77.7
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 1.7e-122 443.4 297 79.1
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 5.1e-122 441.8 298 77.5
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 1.1e-121 440.7 299 76.9
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.1e-121 440.7 298 77.9
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 2.5e-121 439.5 331 73.1
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 2.5e-121 439.5 331 73.1
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 3.3e-121 439.1 297 76.8
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 5.6e-121 438.3 298 77.9
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 5.6e-121 438.3 299 76.3
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 1.6e-120 436.8 298 76.2
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 2.8e-120 436.0 298 75.8
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 4.8e-120 435.3 299 76.9
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.1e-119 434.1 296 76.0
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 1.4e-119 433.7 298 75.8
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.4e-119 433.0 296 75.7
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 3.1e-119 432.6 298 74.8
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 3.1e-119 432.6 316 74.1
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 4.0e-119 432.2 298 75.5
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 6.9e-119 431.4 299 75.9
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 6.9e-119 431.4 298 75.8
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 3.4e-118 429.1 298 75.5
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 4.4e-118 428.7 298 75.2
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 2.9e-117 426.0 298 75.8
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 3.8e-117 425.6 296 73.3
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 4.9e-117 425.2 298 75.2
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 6.4e-117 424.9 298 75.2
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 8.4e-117 424.5 298 75.2
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 8.4e-117 424.5 298 75.2
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 8.4e-117 424.5 298 75.2
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 8.4e-117 424.5 298 75.2
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 3.2e-116 422.5 298 74.8
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 7.1e-116 421.4 269 80.7
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 6.0e-115 418.3 299 74.2
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 1.0e-114 417.5 298 74.5
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 3.0e-114 416.0 269 79.9
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.6e-112 410.2 298 72.8
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.6e-107 393.7 266 77.4
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 2.6e-102 376.3 294 69.0
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.9e-97 360.1 297 62.0
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 5.0e-93 345.5 297 60.6
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 2.5e-89 333.2 297 59.3
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 2.2e-85 320.1 232 73.3
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 1.7e-72 277.3 224 67.0
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.6e-70 270.8 271 57.6
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 4.5e-70 269.2 208 69.7
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 1.0e-69 268.1 227 66.5
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 3.6e-67 259.6 303 49.2
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 8.8e-66 255.0 270 52.2
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 5.7e-65 252.3 279 52.3
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 2.2e-64 250.4 206 63.6
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 4.1e-63 246.1 132 95.5
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 2.5e-60 236.9 270 48.9
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 9.4e-60 235.0 154 79.2
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.3e-56 224.6 150 76.7
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.0e-53 214.9 185 65.4
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 6.6e-45 185.7 150 66.0
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.2e-43 181.4 108 85.2
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 9.2e-39 165.2 161 55.3
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 5.0e-37 159.5 91 89.0
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 1.8e-34 151.0 100 77.0
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 5.8e-33 146.0 224 42.0
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 4.1e-31 139.8 100 71.0
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.1e-23 115.2 133 50.4
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 2.1e-22 110.9 66 84.8
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 3.0e-21 107.1 57 93.0
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 1.4e-15 88.2 88 55.7
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 5.1e-13 79.7 43 93.0
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 1.5e-12 78.2 46 84.8


User provided reference genes

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