Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 4.6e-169 597.8 303 100.0
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 5.1e-160 567.8 304 94.7
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 6.7e-160 567.4 304 94.4
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 6.7e-160 567.4 303 93.7
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 1.8e-149 532.7 304 88.2
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 5.8e-148 527.7 304 87.2
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 2.9e-147 525.4 304 86.2
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 6.5e-147 524.2 304 86.5
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 9.6e-143 510.4 304 84.9
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 3.0e-136 488.8 304 81.2
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 5.1e-136 488.0 303 80.9
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 8.7e-136 487.3 299 79.9
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.1e-135 486.9 304 80.9
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.5e-135 486.5 304 79.3
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 3.3e-135 485.3 299 80.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 4.3e-135 485.0 304 79.9
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 5.7e-135 484.6 304 80.6
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 5.7e-135 484.6 304 80.6
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 3.1e-133 478.8 304 78.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 9.1e-133 477.2 299 78.6
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 9.1e-133 477.2 304 78.3
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.3e-131 473.4 299 79.3
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 78.3
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.3e-131 473.4 304 78.0
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.7e-131 473.0 304 78.0
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 5.0e-131 471.5 304 78.6
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 5.0e-131 471.5 299 78.3
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 6.5e-131 471.1 304 76.6
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 8.5e-131 470.7 298 79.5
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.4e-130 469.9 304 77.6
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 9.4e-130 467.2 304 78.0
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 9.4e-130 467.2 304 75.0
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-129 466.8 304 77.3
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 1.6e-129 466.5 304 78.0
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.1e-129 466.1 304 74.3
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-129 466.1 302 77.5
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 2.7e-129 465.7 298 77.9
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 3.6e-129 465.3 304 76.0
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.6e-129 465.3 299 77.6
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 3.6e-129 465.3 299 77.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 4.6e-129 464.9 304 77.3
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.4e-128 463.4 304 75.7
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.4e-128 463.4 304 75.7
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 2.3e-128 462.6 297 75.8
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 3.0e-128 462.2 304 75.7
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 3.9e-128 461.8 300 77.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 5.1e-128 461.5 302 74.8
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 5.1e-128 461.5 300 76.7
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.1e-127 460.3 304 75.7
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 1.5e-127 459.9 304 75.7
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 3.3e-127 458.8 304 74.0
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 5.7e-127 458.0 304 74.0
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 7.4e-127 457.6 304 75.3
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.8e-126 455.7 304 73.7
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 3.7e-126 455.3 304 74.0
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 73.0
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 8.2e-126 454.1 304 73.7
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 1.3e-123 446.8 306 72.9
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 1.3e-123 446.8 306 72.9
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 2.2e-123 446.0 306 72.9
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.9e-123 445.7 304 73.7
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 6.5e-123 444.5 306 72.2
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 8.5e-123 444.1 301 73.8
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 1.4e-122 443.4 306 72.2
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.9e-122 443.0 306 71.9
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.9e-122 443.0 304 71.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.2e-121 440.3 304 72.7
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 4.7e-121 438.3 303 71.9
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 4.7e-121 438.3 304 73.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 6.1e-121 438.0 278 78.8
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 1.0e-120 437.2 303 72.3
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.0e-120 437.2 303 72.6
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.9e-120 435.3 302 71.9
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.1e-119 433.7 306 71.2
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 2.6e-119 432.6 304 71.4
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 3.3e-119 432.2 306 72.2
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 3.3e-119 432.2 304 71.4
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.3e-119 432.2 304 72.7
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 4.4e-119 431.8 303 72.6
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 7.4e-119 431.0 306 72.5
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 7.4e-119 431.0 300 71.3
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.8e-117 426.4 283 76.3
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.2e-111 407.1 303 68.3
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 4.4e-111 405.2 305 66.2
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.7e-110 403.3 262 77.5
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 6.3e-110 401.4 304 65.8
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 8.2e-110 401.0 302 66.6
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.8e-109 399.8 302 66.6
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.1e-106 390.6 303 63.7
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 6.8e-104 381.3 247 77.7
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 9.8e-103 377.5 265 71.7
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.1e-101 374.0 286 66.8
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 2.0e-95 353.2 220 82.7
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 6.3e-94 348.2 263 67.3
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.9e-90 336.7 304 56.6
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 7.3e-90 334.7 269 62.8
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 4.9e-86 322.0 260 63.5
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 4.1e-85 318.9 230 70.9
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 5.9e-84 315.1 295 58.3
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.7e-83 313.5 291 56.0
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 8.0e-81 304.7 303 52.8
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 6.8e-80 301.6 298 54.0
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-79 300.8 196 75.0
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.0e-75 287.7 300 54.0
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 4.3e-74 282.3 202 70.3
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 9.5e-74 281.2 296 52.4
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 2.6e-63 246.5 316 42.7
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.1e-61 239.2 213 59.2
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.8e-52 208.4 143 73.4
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.6e-50 201.4 144 72.2
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.1e-49 198.4 144 70.8
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 8.1e-49 198.4 302 43.0
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-44 184.5 143 68.5
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.2e-44 184.5 320 37.5
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 9.6e-42 174.9 163 52.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 7.6e-39 165.2 123 66.7
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 9.3e-37 158.3 362 31.5
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.6e-36 157.5 91 78.0
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.4e-32 143.7 264 40.2
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.7e-30 137.5 292 32.5
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.5e-29 132.5 94 69.1
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.3e-27 127.1 338 29.0
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 4.2e-13 79.7 43 81.4


User provided reference genes

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