Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2586 Trifolium pratense HOM05D006340 ORTHO05D007568 6.9e-271 937.2 658 100.0
Ca_10176_v3 Cicer arietinum L. HOM05D006340 ORTHO05D007568 1.9e-199 699.9 668 82.6
Medtr1g084120 Medicago truncatula HOM05D006340 ORTHO05D007568 7.1e-199 698.0 667 80.4
Glyma.20G096700 Glycine max HOM05D006340 ORTHO05D007568 1.4e-159 567.4 671 75.0
Psat6g152600 Pisum sativum HOM05D006340 ORTHO05D007568 4.6e-158 562.4 520 73.8
Glyma.10G146700 Glycine max HOM05D006340 ORTHO05D007568 8.8e-157 558.1 671 74.2
Phvul.007G201700 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 9.4e-151 538.1 670 73.3
Lj5g0007706 Lotus japonicus HOM05D006340 ORTHO05D007568 1.8e-141 507.3 673 70.6
arahy.Tifrunner.gnm1.ann1.31L8TN Arachis hypogaea HOM05D006340 ORTHO05D007568 5.7e-132 475.7 684 69.9
arahy.Tifrunner.gnm1.ann1.35WTTC Arachis hypogaea HOM05D006340 ORTHO05D007568 2.8e-131 473.4 681 69.9
VMungo0720G2454 Vigna mungo HOM05D006340 ORTHO05D007568 7.7e-129 465.3 665 69.0
Lalb_Chr02g0147781 Lupinus albus HOM05D006340 ORTHO05D007568 1.8e-125 454.1 670 67.6
Glyma.03G231000 Glycine max HOM05D006340 ORTHO05D007568 7.5e-108 395.6 661 66.1
Glyma.19G228200 Glycine max HOM05D006340 ORTHO05D007568 8.3e-107 392.1 671 65.4
Phvul.001G224800 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 4.0e-101 373.2 659 64.8
QL03p014074 Quercus lobata HOM05D006340 ORTHO05D007568 1.5e-100 371.3 672 62.6
TAR362G0132 Trochodendron aralioides HOM05D006340 ORTHO05D007568 4.9e-99 366.3 668 61.5
Potri.013G008200 Populus trichocarpa HOM05D006340 ORTHO05D007568 3.5e-97 360.1 664 60.7
VMungo1383G0056 Vigna mungo HOM05D006340 ORTHO05D007568 6.6e-96 355.9 654 64.1
Potri.005G013000 Populus trichocarpa HOM05D006340 ORTHO05D007568 2.5e-95 354.0 664 60.2
Sabra13G0006900 Salix brachista HOM05D006340 ORTHO05D007568 1.6e-94 351.3 670 51.3
Cfa006707 Carpinus fangiana HOM05D006340 ORTHO05D007568 3.4e-92 343.6 677 60.1
CSS0010691 Camellia sinensis var. sinensis HOM05D006340 ORTHO05D007568 1.9e-90 337.8 668 60.8
Haze_04056 Corylus avellana HOM05D006340 ORTHO05D007568 5.4e-90 336.3 672 56.5
Actinidia16863 Actinidia chinensis HOM05D006340 ORTHO05D007568 1.2e-89 335.1 669 50.8
TWI36G0703 Tripterygium wilfordii HOM05D006340 ORTHO05D007568 2.7e-89 334.0 658 60.8
TAR633G1326 Trochodendron aralioides HOM05D006340 ORTHO05D007568 2.7e-89 334.0 671 59.8
Prupe.6G312400 Prunus persica HOM05D006340 ORTHO05D007568 3.0e-88 330.5 670 60.7
Ciclev10000538m.g Citrus clementina HOM05D006340 ORTHO05D007568 2.8e-86 323.9 669 60.1
Atru.chr2.357 Acer truncatum HOM05D006340 ORTHO05D007568 3.6e-86 323.6 671 59.3
Actinidia35518 Actinidia chinensis HOM05D006340 ORTHO05D007568 4.7e-86 323.2 657 60.3
CsaV3_2G007150 Cucumis sativus L. HOM05D006340 ORTHO05D007568 2.6e-84 317.4 656 60.7
Duzib177G0712 Durio zibethinus HOM05D006340 ORTHO05D007568 2.2e-83 314.3 668 59.0
ClCG02G014860 Citrullus lanatus HOM05D006340 ORTHO05D007568 2.9e-83 313.9 681 46.3
Manes.09G177400 Manihot esculenta HOM05D006340 ORTHO05D007568 2.4e-82 310.8 668 51.0
Thecc.05G323700 Theobroma cacao HOM05D006340 ORTHO05D007568 2.4e-82 310.8 672 58.3
CiPaw.07G030100 Carya illinoinensis HOM05D006340 ORTHO05D007568 5.4e-82 309.7 670 58.7
MD00G1208300 Malus domestica HOM05D006340 ORTHO05D007568 1.5e-79 301.6 664 58.3
MBI18_g32031_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 3.3e-79 300.4 686 43.3
MELO3C004178.2 Cucumis melo HOM05D006340 ORTHO05D007568 1.6e-78 298.1 663 49.9
Dinv30898 Davidia involucrata HOM05D006340 ORTHO05D007568 2.1e-78 297.7 667 38.8
Sed0011043 Sechium edule HOM05D006340 ORTHO05D007568 8.1e-78 295.8 673 58.5
Hma1.2p1_0008F-1.1_g005560 Hydrangea macrophylla HOM05D006340 ORTHO05D007568 9.0e-77 292.4 675 58.5
Sabra05G0021400 Salix brachista HOM05D006340 ORTHO05D007568 4.5e-76 290.0 689 34.4
arahy.Tifrunner.gnm1.ann1.Y7QP4L Arachis hypogaea HOM05D006340 ORTHO05D007568 9.9e-76 288.9 658 54.7
Nn3g21728 Nelumbo nucifera HOM05D006340 ORTHO05D007568 9.9e-76 288.9 676 57.7
Duzib128G1170 Durio zibethinus HOM05D006340 ORTHO05D007568 6.4e-75 286.2 654 58.9
Gohir.D11G284300 Gossypium hirsutum HOM05D006340 ORTHO05D007568 9.3e-74 282.3 663 57.6
Lju926C5T2 Lonicera japonica HOM05D006340 ORTHO05D007568 1.2e-73 282.0 665 52.9
MBI19_g03242_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 7.9e-73 279.3 664 47.0
Sed0017369 Sechium edule HOM05D006340 ORTHO05D007568 1.8e-72 278.1 666 58.0
Cc02_g35160 Coffea canephora HOM05D006340 ORTHO05D007568 3.0e-72 277.3 670 52.5
Cpa.g.sc48.167 Carica papaya HOM05D006340 ORTHO05D007568 5.1e-72 276.6 662 56.6
COL.COLO4_05545 Corchorus olitorius HOM05D006340 ORTHO05D007568 5.1e-72 276.6 670 58.2
Aqoxy2G02721 Aquilegia oxysepala HOM05D006340 ORTHO05D007568 2.1e-70 271.2 680 56.5
MD12G1205300 Malus domestica HOM05D006340 ORTHO05D007568 3.6e-70 270.4 670 55.7
DCAR_025287 Daucus carota HOM05D006340 ORTHO05D007568 5.3e-69 266.5 672 56.0
CiPaw.08G154900 Carya illinoinensis HOM05D006340 ORTHO05D007568 9.0e-69 265.8 671 56.8
Lsat_1_v5_gn_5_40480 Lactuca sativa HOM05D006340 ORTHO05D007568 2.0e-68 264.6 653 56.5
CANSAT54G2981 Cannabis sativa HOM05D006340 ORTHO05D007568 7.6e-68 262.7 659 56.4
Gorai.007G307200 Gossypium raimondii HOM05D006340 ORTHO05D007568 7.6e-68 262.7 663 56.7
Gorai.004G236300 Gossypium raimondii HOM05D006340 ORTHO05D007568 9.9e-68 262.3 657 55.9
Lj5C328T5 Lonicera japonica HOM05D006340 ORTHO05D007568 4.9e-67 260.0 671 51.0
GSVIVG01031248001 Vitis vinifera HOM05D006340 ORTHO05D007568 4.2e-66 256.9 668 55.4
Gohir.A08G205400 Gossypium hirsutum HOM05D006340 ORTHO05D007568 5.5e-66 256.5 661 55.2
PGR031G1700 Punica granatum HOM05D006340 ORTHO05D007568 1.6e-65 255.0 669 56.7
PSO761G0363 Papaver somniferum HOM05D006340 ORTHO05D007568 1.0e-64 252.3 657 54.9
AUR62006742 Chenopodium quinoa HOM05D006340 ORTHO05D007568 1.3e-64 251.9 673 55.3
Gohir.D08G222500 Gossypium hirsutum HOM05D006340 ORTHO05D007568 5.1e-64 250.0 660 55.2
HanXRQChr11g0324231 Helianthus annuus HOM05D006340 ORTHO05D007568 5.1e-64 250.0 650 56.2
arahy.Tifrunner.gnm1.ann1.9H9EE5 Arachis hypogaea HOM05D006340 ORTHO05D007568 7.4e-63 246.1 658 43.5
DCAR_029344 Daucus carota HOM05D006340 ORTHO05D007568 7.4e-63 246.1 651 42.7
PSO210G6591 Papaver somniferum HOM05D006340 ORTHO05D007568 1.6e-62 245.0 562 60.7
AUR62000387 Chenopodium quinoa HOM05D006340 ORTHO05D007568 2.1e-62 244.6 667 55.3
vmacro01568 Vaccinium macrocarpon HOM05D006340 ORTHO05D007568 2.1e-62 244.6 658 46.2
ATR0693G206 Amborella trichopoda HOM05D006340 ORTHO05D007568 2.8e-62 244.2 655 56.8
Os01g0300900 Oryza sativa ssp. japonica HOM05D006340 ORTHO05D007568 3.7e-62 243.8 664 48.5
ECA246G2180 Erigeron canadensis HOM05D006340 ORTHO05D007568 4.8e-62 243.4 656 55.3
Rhsim11G0096500 Rhododendron simsii HOM05D006340 ORTHO05D007568 1.8e-61 241.5 664 50.5
Zm00001eb340330 Zea mays HOM05D006340 ORTHO05D007568 5.8e-60 236.5 673 51.3
Nitab4.5_0004525g0020 Nicotiana tabacum HOM05D006340 ORTHO05D007568 2.5e-58 231.1 671 49.9
RcHm_v2.0_Chr3g0457201 Rosa chinensis HOM05D006340 ORTHO05D007568 2.5e-58 231.1 695 53.5
Zm00001eb130130 Zea mays HOM05D006340 ORTHO05D007568 7.1e-58 229.6 678 45.6
CAN.G1076.21 Capsicum annuum HOM05D006340 ORTHO05D007568 1.2e-57 228.8 680 49.7
Nitab4.5_0001338g0100 Nicotiana tabacum HOM05D006340 ORTHO05D007568 1.6e-57 228.4 689 47.8
PGSC0003DMG400002763 Solanum tuberosum HOM05D006340 ORTHO05D007568 6.7e-56 223.0 679 53.8
Hund07311 Selenicereus undatus HOM05D006340 ORTHO05D007568 7.4e-55 219.5 663 53.8
Sopen01g044100 Solanum pennellii HOM05D006340 ORTHO05D007568 6.3e-54 216.5 676 54.0
Eucgr.H03294 Eucalyptus grandis HOM05D006340 ORTHO05D007568 5.3e-53 213.4 665 53.7
Oeu053742.1 Olea europaea HOM05D006340 ORTHO05D007568 6.9e-53 213.0 685 52.6
Dinv24462 Davidia involucrata HOM05D006340 ORTHO05D007568 2.6e-52 211.1 378 39.9
FvH4_6g07501 Fragaria vesca HOM05D006340 ORTHO05D007568 3.4e-52 210.7 695 52.4
FAN14G3207 Fragaria x ananassa HOM05D006340 ORTHO05D007568 2.2e-51 208.0 695 52.2
FAN02G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 1.9e-50 204.9 695 52.5
Oeu052936.1 Olea europaea HOM05D006340 ORTHO05D007568 2.1e-49 201.4 674 52.1
EL10Ac4g09463 Beta vulgaris HOM05D006340 ORTHO05D007568 2.7e-49 201.1 671 53.5
Ah.06g195990 Amaranthus hybridus HOM05D006340 ORTHO05D007568 6.1e-49 199.9 666 52.1
THA.LOC104816894 Tarenaya hassleriana HOM05D006340 ORTHO05D007568 1.3e-48 198.7 663 44.0
HPP92_005420 Vanilla planifolia HOM05D006340 ORTHO05D007568 3.3e-47 194.1 667 52.2
Sabra05G0020900 Salix brachista HOM05D006340 ORTHO05D007568 2.3e-40 171.4 278 40.3
Migut.N00937 Erythranthe guttata HOM05D006340 ORTHO05D007568 3.0e-40 171.0 661 47.0
Sabra05G0020800 Salix brachista HOM05D006340 ORTHO05D007568 5.1e-40 170.2 349 59.3
SGA_v2.0_scaffold5G02892 Striga asiatica HOM05D006340 ORTHO05D007568 8.8e-40 169.5 672 39.3
Sabra05G0009200 Salix brachista HOM05D006340 ORTHO05D007568 1.7e-35 155.2 198 77.3
FAN09G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 4.7e-33 147.1 539 46.2
MSTRG.27938 Avicennia marina HOM05D006340 ORTHO05D007568 3.0e-32 144.4 369 35.0
Peaxi162Scf01061g00014 Petunia axillaris HOM05D006340 ORTHO05D007568 1.8e-29 135.2 543 29.5
Solyc01g100600.4 Solanum lycopersicum HOM05D006340 ORTHO05D007568 3.1e-29 134.4 526 43.5
MSTRG.27937 Avicennia marina HOM05D006340 ORTHO05D007568 7.0e-29 133.3 199 70.9
Dinv24463 Davidia involucrata HOM05D006340 ORTHO05D007568 3.5e-28 131.0 177 78.5
Sc16g0009070 Simmondsia chinensis HOM05D006340 ORTHO05D007568 3.5e-28 131.0 508 45.9
Gohir.A11G274100 Gossypium hirsutum HOM05D006340 ORTHO05D007568 7.7e-28 129.8 519 44.5
SalBow3G0642 Salvia bowleyana HOM05D006340 ORTHO05D007568 3.2e-26 124.4 280 36.8
Sabra05G0022400 Salix brachista HOM05D006340 ORTHO05D007568 4.2e-26 124.0 219 37.0
PSO541G0443 Papaver somniferum HOM05D006340 ORTHO05D007568 7.2e-26 123.2 284 34.9
CDE02G0367 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 4.7e-25 120.6 642 34.7
SMO115G0101 Selaginella moellendorffii HOM05D006340 ORTHO05D007568 3.1e-21 107.8 587 34.4
unitig_52.g17414 Utricularia gibba HOM05D006340 ORTHO05D007568 3.1e-21 107.8 232 47.0
CDE08G0055 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 5.5e-18 97.1 494 41.1
THA.LOC104824492 Tarenaya hassleriana HOM05D006340 ORTHO05D007568 9.4e-18 96.3 64 64.1
FAN05G4753 Fragaria x ananassa HOM05D006340 ORTHO05D007568 8.3e-14 83.2 426 46.7
ECA169G0006 Erigeron canadensis HOM05D006340 ORTHO05D007568 5.5e-10 70.5 56 58.9
Medtr4g071265 Medicago truncatula HOM05D006340 ORTHO05D007568 9.5e-10 69.7 44 77.3
vmacro17621 Vaccinium macrocarpon HOM05D003320 ORTHO05D003941 4.4e-07 60.8 199 22.1
MBI18_g03639_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 9.8e-07 59.7 69 50.7
CBR_g49333 Chara braunii HOM05D001137 ORTHO05D001967 3.7e-06 57.8 54 44.4
Rhsim08G0144000 Rhododendron simsii HOM05D003320 ORTHO05D003941 3.7e-06 57.8 191 22.0
SMO022G0002 Selaginella moellendorffii HOM05D003320 ORTHO05D003941 6.3e-06 57.0 53 47.2


User provided reference genes

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