Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25855 Trifolium pratense HOM05D001538 ORTHO05D000007 4.6e-79 297.7 142 100.0
TPR.G576 Trifolium pratense HOM05D001538 ORTHO05D000007 1.0e-33 147.1 129 54.3
TPR.G39675 Trifolium pratense HOM05D001538 ORTHO05D000007 2.9e-33 145.6 114 56.1
Medtr7g037570 Medicago truncatula HOM05D001538 ORTHO05D000007 3.8e-33 145.2 105 61.9
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-31 140.2 120 55.0
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 2.1e-31 139.4 116 56.0
Medtr0488s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 1.2e-29 133.7 99 59.6
Medtr6g049130 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-27 127.1 113 53.1
Medtr0098s0100 Medicago truncatula HOM05D001538 ORTHO05D000007 4.5e-26 121.7 112 50.9
TPR.G28466 Trifolium pratense HOM05D001538 ORTHO05D000007 5.0e-25 118.2 101 51.5
Medtr5g079060 Medicago truncatula HOM05D001538 ORTHO05D000007 3.2e-24 115.5 116 49.1
Medtr8g104770 Medicago truncatula HOM05D001538 ORTHO05D000007 1.4e-22 110.2 113 47.8
Psat1g141600 Pisum sativum HOM05D001538 ORTHO05D000007 3.0e-22 109.0 101 51.5
Medtr6g464500 Medicago truncatula HOM05D001538 ORTHO05D000007 5.2e-22 108.2 111 46.8
TPR.G40148 Trifolium pratense HOM05D001538 ORTHO05D000007 6.8e-22 107.8 85 57.6
Psat4g031920 Pisum sativum HOM05D001538 ORTHO05D000007 9.8e-21 104.0 90 50.0
Phvul.002G232500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.3e-20 103.6 114 46.5
Psat7g105720 Pisum sativum HOM05D001538 ORTHO05D000007 1.3e-20 103.6 93 50.5
Psat5g094960 Pisum sativum HOM05D001538 ORTHO05D000007 9.1e-19 97.4 100 48.0
TPR.G15478 Trifolium pratense HOM05D001538 ORTHO05D000007 9.1e-19 97.4 94 46.8
Psat3g128360 Pisum sativum HOM05D001538 ORTHO05D000007 1.2e-18 97.1 89 49.4
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 2.0e-18 96.3 80 51.2
Lalb_Chr02g0151671 Lupinus albus HOM05D001538 ORTHO05D000007 2.7e-18 95.9 123 41.5
Medtr2g043180 Medicago truncatula HOM05D001538 ORTHO05D000007 2.7e-18 95.9 90 54.4
Medtr4g108010 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-17 93.6 108 38.9
Psat4g039840 Pisum sativum HOM05D001538 ORTHO05D000007 1.3e-17 93.6 88 47.7
Phvul.002G214200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.9e-17 92.4 98 48.0
Psat5g123120 Pisum sativum HOM05D001538 ORTHO05D000007 3.8e-17 92.0 83 50.6
Lalb_Chr09g0334161 Lupinus albus HOM05D001538 ORTHO05D000007 5.0e-17 91.7 121 42.1
Phvul.004G102600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 8.6e-17 90.9 112 41.1
Medtr2g036980 Medicago truncatula HOM05D001538 ORTHO05D000007 2.5e-16 89.4 120 36.7
Medtr4g035630 Medicago truncatula HOM05D001538 ORTHO05D000007 3.3e-16 89.0 113 39.8
TPR.G27799 Trifolium pratense HOM05D001538 ORTHO05D000007 5.5e-16 88.2 92 43.5
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 9.5e-16 87.4 55 67.3
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 6.1e-15 84.7 108 39.8
Phvul.004G102300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.4e-14 83.6 86 44.2
Medtr7g006745 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-14 82.8 106 42.5
Medtr5g064400 Medicago truncatula HOM05D001538 ORTHO05D000007 3.0e-14 82.4 61 55.7
Medtr4g009745 Medicago truncatula HOM05D001538 ORTHO05D000007 4.0e-14 82.0 105 38.1
Medtr6g042480 Medicago truncatula HOM05D001538 ORTHO05D000007 4.0e-14 82.0 114 40.4
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 4.0e-14 82.0 117 35.9
Psat4g149040 Pisum sativum HOM05D001538 ORTHO05D000007 1.2e-13 80.5 48 72.9
TPR.G19697 Trifolium pratense HOM05D001538 ORTHO05D004353 1.2e-13 80.5 78 47.4
TPR.G21298 Trifolium pratense HOM05D001538 ORTHO05D000007 7.5e-13 77.8 79 46.8
Medtr2g037610 Medicago truncatula HOM05D001538 ORTHO05D000007 9.8e-13 77.4 65 50.8
Medtr5g037100 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-12 77.0 95 43.2
Medtr5g037520 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-12 76.6 119 37.0
Medtr5g046930 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-12 76.6 68 47.1
Phvul.001G068900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.7e-12 76.6 86 41.9
FvH4_7g13962 Fragaria vesca HOM05D001538 ORTHO05D000007 2.2e-12 76.3 113 36.3
Medtr5g047910 Medicago truncatula HOM05D001538 ORTHO05D000007 2.2e-12 76.3 64 50.0
Psat4g055000 Pisum sativum HOM05D001538 ORTHO05D000007 2.8e-12 75.9 77 45.5
Medtr4g093740 Medicago truncatula HOM05D001538 ORTHO05D000007 3.7e-12 75.5 108 32.4
Lj9A692G58 Lonicera japonica HOM05D001538 ORTHO05D000007 2.4e-11 72.8 100 43.0
Lj9C692T4 Lonicera japonica HOM05D001538 ORTHO05D000007 2.4e-11 72.8 100 43.0
Medtr3g449600 Medicago truncatula HOM05D001538 ORTHO05D000007 7.0e-11 71.2 87 46.0
FvH4_4g08213 Fragaria vesca HOM05D001538 ORTHO05D000007 9.2e-11 70.9 112 34.8
Medtr1g034250 Medicago truncatula HOM05D001538 ORTHO05D000007 9.2e-11 70.9 111 39.6
Medtr7g445700 Medicago truncatula HOM05D001538 ORTHO05D000007 9.2e-11 70.9 113 36.3
Psat2g082440 Pisum sativum HOM05D001538 ORTHO05D000007 1.6e-10 70.1 61 49.2
Medtr8g104170 Medicago truncatula HOM05D001538 ORTHO05D000007 2.0e-10 69.7 66 45.5
Psat7g060680 Pisum sativum HOM05D000003 ORTHO05D050394 2.0e-10 69.7 59 54.2
FvH4_2g26101 Fragaria vesca HOM05D001538 ORTHO05D000007 2.7e-10 69.3 110 35.5
Phvul.004G102400 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.7e-10 69.3 80 41.2
Medtr1g093780 Medicago truncatula HOM05D001538 ORTHO05D000007 4.5e-10 68.6 100 39.0
Psat3g124560 Pisum sativum HOM05D001538 ORTHO05D000007 7.8e-10 67.8 50 58.0
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-09 67.4 70 45.7
Psat4g216680 Pisum sativum HOM05D001538 ORTHO05D026040 1.3e-09 67.0 81 45.7
RcHm_v2.0_Chr3g0453631 Rosa chinensis HOM05D001538 ORTHO05D000007 1.7e-09 66.6 88 39.8
Medtr2g034230 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-09 66.2 97 35.1
Phvul.004G102200 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.9e-09 65.9 80 40.0
Medtr1g063810 Medicago truncatula HOM05D001538 ORTHO05D000007 3.8e-09 65.5 85 38.8
Psat0s1735g0080 Pisum sativum HOM05D001538 ORTHO05D000007 3.8e-09 65.5 68 44.1
Psat0s3309g0040 Pisum sativum HOM05D001538 ORTHO05D000007 3.8e-09 65.5 81 42.0
TPR.G20035 Trifolium pratense HOM05D001538 ORTHO05D000007 3.8e-09 65.5 81 37.0
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 6.6e-09 64.7 68 45.6
Lju2422A0T21 Lonicera japonica HOM05D001538 ORTHO05D000007 6.6e-09 64.7 68 45.6
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 8.6e-09 64.3 107 35.5
Lju521P0T33 Lonicera japonica HOM05D012945 ORTHO05D000007 1.1e-08 63.9 55 58.2
Medtr8g063620 Medicago truncatula HOM05D001538 ORTHO05D000007 1.1e-08 63.9 88 36.4
Medtr5g048840 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-08 63.5 100 31.0
Medtr7g053210 Medicago truncatula HOM05D001538 ORTHO05D000007 1.5e-08 63.5 61 44.3
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 1.5e-08 63.5 58 44.8
FvH4_3g06911 Fragaria vesca HOM05D001538 ORTHO05D000007 1.9e-08 63.2 87 36.8
FvH4_7g19511 Fragaria vesca HOM05D001538 ORTHO05D000007 1.9e-08 63.2 72 41.7
Psat7g237880 Pisum sativum HOM05D001538 ORTHO05D000007 1.9e-08 63.2 47 59.6
FvH4_1g13572 Fragaria vesca HOM05D001538 ORTHO05D000007 3.3e-08 62.4 113 33.6
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 3.3e-08 62.4 58 46.6
Medtr4g096760 Medicago truncatula HOM05D001538 ORTHO05D000007 4.3e-08 62.0 103 34.0
Medtr3g091430 Medicago truncatula HOM05D001538 ORTHO05D000007 9.5e-08 60.8 68 41.2
Lj2C23T8 Lonicera japonica HOM05D012945 ORTHO05D000007 1.2e-07 60.5 77 41.6
Lj4A923G18 Lonicera japonica HOM05D004198 ORTHO05D006470 1.2e-07 60.5 83 43.4
FvH4_7g18611 Fragaria vesca HOM05D001538 ORTHO05D000007 1.6e-07 60.1 115 34.8
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-07 59.7 85 34.1
Phvul.007G135700 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 2.1e-07 59.7 52 46.2
Lj7P482T20 Lonicera japonica HOM05D001538 ORTHO05D000007 2.8e-07 59.3 77 42.9
Lju2566C0T15 Lonicera japonica HOM05D012945 ORTHO05D000007 2.8e-07 59.3 87 36.8
Medtr7g063750 Medicago truncatula HOM05D001538 ORTHO05D000007 4.7e-07 58.5 113 31.9
Medtr2g074890 Medicago truncatula HOM05D026100 ORTHO05D000007 6.1e-07 58.2 51 49.0
Psat7g029600 Pisum sativum HOM05D001538 ORTHO05D000007 6.1e-07 58.2 88 37.5
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 8.0e-07 57.8 87 37.9
Medtr6g076110 Medicago truncatula HOM05D001538 ORTHO05D000007 8.0e-07 57.8 141 28.4
Lj8C740T13 Lonicera japonica HOM05D001538 ORTHO05D000007 1.0e-06 57.4 92 39.1
FvH4_2g03281 Fragaria vesca HOM05D001538 ORTHO05D000007 1.4e-06 57.0 115 33.0
Lj2A1219T41 Lonicera japonica HOM05D001538 ORTHO05D000007 1.8e-06 56.6 68 42.6
Lju1953C0G19 Lonicera japonica HOM05D001538 ORTHO05D000007 1.8e-06 56.6 61 44.3
Lju2422C0T10 Lonicera japonica HOM05D001538 ORTHO05D000007 1.8e-06 56.6 61 44.3
Medtr0195s0010 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-06 56.2 68 38.2
Medtr0195s0020 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-06 56.2 68 38.2
Medtr4g060870 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-06 56.2 72 34.7
Lj1P271T5 Lonicera japonica HOM05D012945 ORTHO05D000007 3.0e-06 55.8 92 34.8
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 3.0e-06 55.8 79 40.5
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.0e-06 55.8 55 49.1
Phvul.008G032300 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 4.0e-06 55.5 55 49.1
Psat0s3142g0080 Pisum sativum HOM05D001538 ORTHO05D000007 4.0e-06 55.5 65 41.5
Lj9P687T30 Lonicera japonica HOM05D012945 ORTHO05D000007 5.2e-06 55.1 79 39.2
Aqoxy4G02792 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 6.8e-06 54.7 124 29.0
Aqoxy5G03703 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 6.8e-06 54.7 124 29.0
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 6.8e-06 54.7 61 44.3
Medtr5g013810 Medicago truncatula HOM05D001538 ORTHO05D000007 6.8e-06 54.7 57 43.9
Lj4A836T53 Lonicera japonica HOM05D001538 ORTHO05D000007 8.9e-06 54.3 60 40.0
Medtr4g045863 Medicago truncatula HOM05D001538 ORTHO05D000007 8.9e-06 54.3 48 56.2


User provided reference genes

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