Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25845 Trifolium pratense HOM05D001128 ORTHO05D000721 3.2e-48 194.9 108 100.0
Psat2g036720 Pisum sativum HOM05D001128 ORTHO05D000721 4.2e-32 141.4 108 73.1
Medtr5g081460 Medicago truncatula HOM05D001128 ORTHO05D000721 7.4e-29 130.6 111 68.5
Ca_05916_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 3.7e-28 128.3 112 64.3
arahy.Tifrunner.gnm1.ann1.EVQB8B Arachis hypogaea HOM05D001128 ORTHO05D000721 1.8e-22 109.4 103 60.2
arahy.Tifrunner.gnm1.ann1.RKI1B6 Arachis hypogaea HOM05D001128 ORTHO05D000721 1.8e-22 109.4 103 60.2
Glyma.14G063900 Glycine max HOM05D001128 ORTHO05D000721 1.8e-22 109.4 96 64.6
Lalb_Chr04g0250911 Lupinus albus HOM05D001128 ORTHO05D000721 3.0e-22 108.6 102 62.7
Glyma.02G252700 Glycine max HOM05D001128 ORTHO05D000721 6.3e-20 100.9 96 61.5
Phvul.008G228300 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 1.5e-18 96.3 95 61.1
VMungo0464G0499 Vigna mungo HOM05D001128 ORTHO05D000721 2.0e-18 95.9 97 58.8
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 4.5e-18 94.7 100 60.0
Glyma.11G225400 Glycine max HOM05D001128 ORTHO05D000721 7.7e-18 94.0 86 64.0
VMungo0647G0267 Vigna mungo HOM05D001128 ORTHO05D000721 7.7e-18 94.0 96 58.3
Lalb_Chr10g0104881 Lupinus albus HOM05D001128 ORTHO05D000721 1.3e-17 93.2 128 47.7
VMungo1383G0733 Vigna mungo HOM05D001128 ORTHO05D000721 2.9e-17 92.0 96 57.3
arahy.Tifrunner.gnm1.ann1.U326PE Arachis hypogaea HOM05D001128 ORTHO05D000721 3.8e-17 91.7 95 60.0
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 3.8e-17 91.7 100 55.0
Cfa001394 Carpinus fangiana HOM05D001128 ORTHO05D000721 3.8e-17 91.7 101 56.4
Medtr3g069670 Medicago truncatula HOM05D001128 ORTHO05D000721 5.0e-17 91.3 90 61.1
Phvul.001G238700 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 5.0e-17 91.3 96 58.3
CiPaw.02G188400 Carya illinoinensis HOM05D001128 ORTHO05D000721 6.5e-17 90.9 102 56.9
Glyma.18G031800 Glycine max HOM05D001128 ORTHO05D000721 6.5e-17 90.9 91 63.7
arahy.Tifrunner.gnm1.ann1.1NAQ44 Arachis hypogaea HOM05D001128 ORTHO05D000721 8.5e-17 90.5 95 60.0
Haze_17155 Corylus avellana HOM05D001128 ORTHO05D000721 8.5e-17 90.5 101 56.4
TPR.G11407 Trifolium pratense HOM05D001128 ORTHO05D000721 1.4e-16 89.7 102 54.9
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 3.2e-16 88.6 96 56.2
Lalb_Chr17g0346461 Lupinus albus HOM05D001128 ORTHO05D000721 5.5e-16 87.8 126 46.0
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 1.2e-15 86.7 99 54.5
CiPaw.01G293700 Carya illinoinensis HOM05D001128 ORTHO05D000721 2.7e-15 85.5 99 52.5
Psat5g125600 Pisum sativum HOM05D001128 ORTHO05D000721 2.7e-15 85.5 99 51.5
Ca_17132_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 8.0e-15 84.0 86 59.3
Lalb_Chr18g0052901 Lupinus albus HOM05D001128 ORTHO05D000721 1.0e-14 83.6 95 52.6
VMungo0720G0772 Vigna mungo HOM05D001128 ORTHO05D000721 2.3e-14 82.4 96 53.1
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 5.2e-14 81.3 99 51.5
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 5.2e-14 81.3 95 55.8
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 1.1e-13 80.1 95 54.7
FAN06G2816 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.1e-13 80.1 95 54.7
FAN06G3577 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.1e-13 80.1 95 54.7
FAN01G1897 Fragaria x ananassa HOM05D001128 ORTHO05D000721 4.4e-13 78.2 95 53.7
MBI05_g02674_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 7.4e-13 77.4 104 45.2
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 3.7e-12 75.1 97 46.4
MD07G1207900 Malus domestica HOM05D001128 ORTHO05D000721 4.8e-12 74.7 101 52.5
Lj6g0007644 Lotus japonicus HOM05D001128 ORTHO05D000721 1.8e-11 72.8 92 53.3
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 2.4e-11 72.4 101 46.5
FAN10G3504 Fragaria x ananassa HOM05D001128 ORTHO05D000721 2.4e-11 72.4 96 54.2
TWI09G0818 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 2.4e-11 72.4 100 46.0
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 4.1e-11 71.6 100 44.0
MD01G1142200 Malus domestica HOM05D001128 ORTHO05D000721 5.3e-11 71.2 100 52.0
ClCG11G006470 Citrullus lanatus HOM05D001128 ORTHO05D000721 9.1e-11 70.5 99 44.4
Lalb_Chr15g0084451 Lupinus albus HOM05D001128 ORTHO05D000721 9.1e-11 70.5 92 50.0
Gohir.A05G346700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.6e-10 69.7 97 48.5
Gorai.012G073700 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.6e-10 69.7 97 48.5
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 2.0e-10 69.3 97 49.5
Aqoxy1G00786 Aquilegia oxysepala HOM05D001128 ORTHO05D000721 2.6e-10 68.9 96 47.9
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.6e-10 68.9 97 48.5
LjContig00141g0001836 Lotus japonicus HOM05D001128 ORTHO05D000721 3.5e-10 68.6 74 60.8
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 7.7e-10 67.4 94 46.8
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 1.3e-09 66.6 96 49.0
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 1.7e-09 66.2 100 47.0
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 1.7e-09 66.2 100 47.0
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.2e-09 65.9 101 46.5
AT2G39870 Arabidopsis thaliana HOM05D012316 ORTHO05D000721 2.2e-09 65.9 99 46.5
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 2.2e-09 65.9 101 44.6
VMungo0464G0262 Vigna mungo HOM05D001128 ORTHO05D000721 2.2e-09 65.9 72 52.8
VMungo1127G1222 Vigna mungo HOM05D001128 ORTHO05D000721 3.8e-09 65.1 67 58.2
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.0e-09 64.7 102 43.1
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 5.0e-09 64.7 102 43.1
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 6.5e-09 64.3 96 42.7
THA.LOC104809429 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 6.5e-09 64.3 97 49.5
THA.LOC104810062 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 6.5e-09 64.3 96 46.9
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 1.1e-08 63.5 97 45.4
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.5e-08 63.2 102 42.2
CARHR134790 Cardamine hirsuta HOM05D012316 ORTHO05D000721 1.9e-08 62.8 99 45.5
ClCG07G003770 Citrullus lanatus HOM05D001128 ORTHO05D000721 1.9e-08 62.8 90 42.2
Eucgr.J00969 Eucalyptus grandis HOM05D001128 ORTHO05D000721 2.5e-08 62.4 72 55.6
CiPaw.10G150200 Carya illinoinensis HOM05D001128 ORTHO05D000721 3.2e-08 62.0 98 43.9
Thhalv10017947m.g Eutrema salsugineum HOM05D012316 ORTHO05D000721 4.2e-08 61.6 99 44.4
Carub.0004s2199 Capsella rubella HOM05D012316 ORTHO05D000721 7.2e-08 60.8 99 44.4
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 7.2e-08 60.8 98 41.8
Nn2g11296 Nelumbo nucifera HOM05D001128 ORTHO05D000721 9.4e-08 60.5 99 42.4
Manes.10G020700 Manihot esculenta HOM05D001128 ORTHO05D000721 1.2e-07 60.1 96 42.7
Nitab4.5_0000243g0040 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.2e-07 60.1 95 48.4
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 1.6e-07 59.7 97 41.2
THA.LOC104824295 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 2.1e-07 59.3 92 42.4
TWI53G0706 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 2.1e-07 59.3 111 41.4
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 2.7e-07 58.9 98 45.9
C04p67650 Brassica napus HOM05D001949 ORTHO05D003065 3.6e-07 58.5 92 41.3
BolC4t28264H Brassica oleracea HOM05D012316 ORTHO05D000721 3.6e-07 58.5 92 41.3
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 3.6e-07 58.5 94 42.6
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 3.6e-07 58.5 125 36.0
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 3.6e-07 58.5 121 39.7
Sp4g22160 Schrenkiella parvula HOM05D012316 ORTHO05D000721 3.6e-07 58.5 99 44.4
Manes.07G123100 Manihot esculenta HOM05D001128 ORTHO05D000721 6.1e-07 57.8 98 40.8
BraA04t18487Z Brassica rapa HOM05D012316 ORTHO05D000721 8.0e-07 57.4 92 41.3
Cfa017294 Carpinus fangiana HOM05D001128 ORTHO05D000721 8.0e-07 57.4 97 40.2
AL4G37440 Arabidopsis lyrata HOM05D012316 ORTHO05D000721 1.0e-06 57.0 99 42.4
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 1.0e-06 57.0 83 41.0
Lj1A946G35 Lonicera japonica HOM05D001128 ORTHO05D000721 1.0e-06 57.0 83 41.0
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.0e-06 57.0 99 42.4
A04p30210 Brassica napus HOM05D001949 ORTHO05D003065 1.4e-06 56.6 92 41.3
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 1.4e-06 56.6 121 39.7
MELO3C026566.2 Cucumis melo HOM05D001128 ORTHO05D000721 4.0e-06 55.1 92 37.0
CsaV3_5G008580 Cucumis sativus L. HOM05D001128 ORTHO05D000721 4.0e-06 55.1 92 37.0
Nitab4.5_0002822g0050 Nicotiana tabacum HOM05D001128 ORTHO05D000721 4.0e-06 55.1 95 46.3


User provided reference genes

Program Settings