Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25775 Trifolium pratense HOM05D006831 ORTHO05D008256 3.4e-195 684.9 356 100.0
TPR.G29201 Trifolium pratense HOM05D006831 ORTHO05D008256 4.6e-59 232.6 119 93.3
Psat4g221040 Pisum sativum HOM05D006831 ORTHO05D008256 2.1e-56 223.8 126 82.5
Medtr8g014330 Medicago truncatula HOM05D006831 ORTHO05D008256 1.4e-55 221.1 119 89.1
Ca_23268_v3 Cicer arietinum L. HOM05D006831 ORTHO05D008256 8.6e-50 201.8 119 81.5
arahy.Tifrunner.gnm1.ann1.4LXS91 Arachis hypogaea HOM05D006831 ORTHO05D008256 4.7e-40 169.5 120 65.8
arahy.Tifrunner.gnm1.ann1.U3LBHC Arachis hypogaea HOM05D006831 ORTHO05D008256 4.0e-39 166.4 120 65.0
Lj3g0006655 Lotus japonicus HOM05D006831 ORTHO05D008256 5.4e-36 156.0 119 62.2
Lalb_Chr04g0262951 Lupinus albus HOM05D006831 ORTHO05D008256 4.6e-35 152.9 122 65.6
TPR.G14139 Trifolium pratense HOM05D041061 ORTHO05D020833 1.3e-34 151.4 92 85.9
Prupe.3G060100 Prunus persica HOM05D006831 ORTHO05D008256 5.1e-34 149.4 119 57.1
Thecc.06G098700 Theobroma cacao HOM05D006831 ORTHO05D008256 4.3e-33 146.4 119 57.1
VMungo0331G1511 Vigna mungo HOM05D006831 ORTHO05D008256 9.6e-33 145.2 119 63.0
Phvul.010G145700 Phaseolus vulgaris HOM05D006831 ORTHO05D008256 4.8e-32 142.9 119 60.5
Potri.001G189400 Populus trichocarpa HOM05D006831 ORTHO05D008256 4.8e-32 142.9 177 45.8
Glyma.08G201400 Glycine max HOM05D006831 ORTHO05D008256 1.1e-31 141.7 119 58.8
vmacro18857 Vaccinium macrocarpon HOM05D006831 ORTHO05D008256 1.1e-31 141.7 120 55.0
COL.COLO4_30498 Corchorus olitorius HOM05D006831 ORTHO05D008256 1.8e-31 141.0 121 57.0
RcHm_v2.0_Chr2g0140341 Rosa chinensis HOM05D006831 ORTHO05D008256 1.8e-31 141.0 119 54.6
Duzib235G1306 Durio zibethinus HOM05D006831 ORTHO05D008256 3.1e-31 140.2 119 54.6
Dinv30442 Davidia involucrata HOM05D006831 ORTHO05D008256 4.0e-31 139.8 119 56.3
TAR626G1633 Trochodendron aralioides HOM05D006831 ORTHO05D008256 5.3e-31 139.4 120 55.0
VMungo1080G0645 Vigna mungo HOM05D006831 ORTHO05D008256 6.9e-31 139.0 119 58.0
MD09G1204500 Malus domestica HOM05D006831 ORTHO05D008256 9.0e-31 138.7 122 54.1
Manes.11G034300 Manihot esculenta HOM05D006831 ORTHO05D008256 9.0e-31 138.7 119 55.5
TPR.G28503 Trifolium pratense HOM05D041061 ORTHO05D020833 9.0e-31 138.7 84 86.9
Glyma.07G015900 Glycine max HOM05D006831 ORTHO05D008256 1.2e-30 138.3 119 56.3
Potri.011G047800 Populus trichocarpa HOM05D006831 ORTHO05D008256 3.4e-30 136.7 119 52.9
Gohir.A10G066100 Gossypium hirsutum HOM05D006831 ORTHO05D008256 9.9e-30 135.2 119 55.5
Ciclev10025849m.g Citrus clementina HOM05D006831 ORTHO05D008256 2.2e-29 134.0 119 52.1
FvH4_6g32300 Fragaria vesca HOM05D006831 ORTHO05D008256 2.2e-29 134.0 119 53.8
FAN02G3719 Fragaria x ananassa HOM05D006831 ORTHO05D008256 2.2e-29 134.0 119 52.9
Rhsim08G0227100 Rhododendron simsii HOM05D006831 ORTHO05D008256 4.9e-29 132.9 121 52.9
Eucgr.F03071 Eucalyptus grandis HOM05D006831 ORTHO05D008256 6.4e-29 132.5 123 46.3
FAN05G2796 Fragaria x ananassa HOM05D006831 ORTHO05D008256 8.4e-29 132.1 119 52.9
Atru.chr1.3517 Acer truncatum HOM05D006831 ORTHO05D008256 1.1e-28 131.7 119 50.4
Lsat_1_v5_gn_1_36980 Lactuca sativa HOM05D006831 ORTHO05D008256 1.4e-28 131.3 122 48.4
Gorai.011G071900 Gossypium raimondii HOM05D006831 ORTHO05D008256 3.2e-28 130.2 179 42.5
Lsat_1_v5_gn_5_134400 Lactuca sativa HOM05D006831 ORTHO05D008256 3.2e-28 130.2 122 49.2
Sabra01G0151300 Salix brachista HOM05D006831 ORTHO05D008256 4.2e-28 129.8 153 45.8
GSVIVG01017000001 Vitis vinifera HOM05D006831 ORTHO05D008256 4.2e-28 129.8 119 52.1
QL05p020342 Quercus lobata HOM05D006831 ORTHO05D008256 5.4e-28 129.4 119 54.6
Actinidia21708 Actinidia chinensis HOM05D006831 ORTHO05D008256 7.1e-28 129.0 120 53.3
CSS0014632 Camellia sinensis var. sinensis HOM05D006831 ORTHO05D008256 7.1e-28 129.0 119 52.1
Gohir.D10G067400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 7.1e-28 129.0 179 41.9
VMungo0331G1726 Vigna mungo HOM05D006831 ORTHO05D008256 7.1e-28 129.0 109 61.5
Haze_06254 Corylus avellana HOM05D006831 ORTHO05D008256 9.3e-28 128.6 166 46.4
TAR383G0884 Trochodendron aralioides HOM05D006831 ORTHO05D008256 2.1e-27 127.5 119 48.7
ECA247G2417 Erigeron canadensis HOM05D006831 ORTHO05D008256 2.7e-27 127.1 124 46.8
Actinidia32697 Actinidia chinensis HOM05D006831 ORTHO05D008256 7.9e-27 125.6 119 50.4
Ah.01g022020 Amaranthus hybridus HOM05D006831 ORTHO05D008256 1.0e-26 125.2 119 48.7
FAN14G1280 Fragaria x ananassa HOM05D006831 ORTHO05D008256 1.0e-26 125.2 105 57.1
Hma1.2p1_0430F.1_g151466 Hydrangea macrophylla HOM05D006831 ORTHO05D008256 1.0e-26 125.2 121 49.6
Cfa003655 Carpinus fangiana HOM05D006831 ORTHO05D008256 1.3e-26 124.8 190 42.1
AUR62022199 Chenopodium quinoa HOM05D006831 ORTHO05D008256 1.8e-26 124.4 119 52.1
Phvul.005G166600 Phaseolus vulgaris HOM05D006831 ORTHO05D008256 2.3e-26 124.0 119 55.5
CiPaw.01G232000 Carya illinoinensis HOM05D006831 ORTHO05D008256 3.0e-26 123.6 119 51.3
Gorai.003G062200 Gossypium raimondii HOM05D006831 ORTHO05D008256 5.1e-26 122.9 120 49.2
CiPaw.02G146100 Carya illinoinensis HOM05D006831 ORTHO05D008256 6.7e-26 122.5 182 41.8
Gohir.D03G058400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 8.7e-26 122.1 120 48.3
Lj5A54G57 Lonicera japonica HOM05D006831 ORTHO05D008256 8.7e-26 122.1 123 51.2
TWI12G0407 Tripterygium wilfordii HOM05D006831 ORTHO05D008256 1.5e-25 121.3 120 49.2
Oeu050599.1 Olea europaea HOM05D006831 ORTHO05D008256 1.9e-25 120.9 119 48.7
Sabra11G0033200 Salix brachista HOM05D006831 ORTHO05D008256 2.5e-25 120.6 119 47.9
HanXRQChr10g0313251 Helianthus annuus HOM05D006831 ORTHO05D008256 3.3e-25 120.2 123 50.4
Migut.I00901 Erythranthe guttata HOM05D006831 ORTHO05D008256 4.3e-25 119.8 119 49.6
Gohir.A02G117700 Gossypium hirsutum HOM05D006831 ORTHO05D008256 4.3e-25 119.8 121 48.8
CAN.G1143.6 Capsicum annuum HOM05D006831 ORTHO05D008256 7.4e-25 119.0 115 44.3
PGR102G2866 Punica granatum HOM05D006831 ORTHO05D008256 7.4e-25 119.0 120 48.3
MBI04_g30107_MAGBIO Magnolia biondii HOM05D006831 ORTHO05D008256 1.6e-24 117.9 118 49.2
AUR62031907 Chenopodium quinoa HOM05D006831 ORTHO05D008256 2.1e-24 117.5 119 49.6
Cc04_g02630 Coffea canephora HOM05D006831 ORTHO05D008256 2.8e-24 117.1 122 45.9
Hund00686 Selenicereus undatus HOM05D006831 ORTHO05D008256 1.4e-23 114.8 123 48.0
CANSAT56G0873 Cannabis sativa HOM05D006831 ORTHO05D008256 2.4e-23 114.0 124 45.2
Solyc03g120970.3 Solanum lycopersicum HOM05D006831 ORTHO05D008256 5.3e-23 112.8 120 42.5
Sopen03g039800 Solanum pennellii HOM05D006831 ORTHO05D008256 5.3e-23 112.8 120 42.5
Peaxi162Scf00038g00918 Petunia axillaris HOM05D006831 ORTHO05D008256 1.5e-22 111.3 121 43.0
HanXRQChr02g0032201 Helianthus annuus HOM05D006831 ORTHO05D008256 2.6e-22 110.5 82 58.5
Nn6g35309 Nelumbo nucifera HOM05D006831 ORTHO05D008256 2.6e-22 110.5 119 48.7
PGSC0003DMG400002528 Solanum tuberosum HOM05D006831 ORTHO05D008256 4.5e-22 109.8 128 40.6
MSTRG.11030 Avicennia marina HOM05D006831 ORTHO05D008256 9.9e-22 108.6 123 43.9
DCAR_016191 Daucus carota HOM05D006831 ORTHO05D008256 9.9e-22 108.6 83 54.2
EL10Ac9g21213 Beta vulgaris HOM05D006831 ORTHO05D008256 2.2e-21 107.5 117 46.2
Cpa.g.sc109.6 Carica papaya HOM05D006831 ORTHO05D008256 6.4e-21 105.9 124 42.7
PSO210G6112 Papaver somniferum HOM05D006831 ORTHO05D008256 6.4e-21 105.9 127 43.3
TPR.G852 Trifolium pratense HOM05D000003 ORTHO05D000004 1.4e-20 104.8 67 85.1
PSO210G4514 Papaver somniferum HOM05D006831 ORTHO05D008256 3.2e-20 103.6 127 41.7
Aqoxy7G01449 Aquilegia oxysepala HOM05D006831 ORTHO05D008256 7.1e-20 102.4 123 44.7
ClCG00G002730 Citrullus lanatus HOM05D006831 ORTHO05D008256 9.3e-20 102.1 120 44.2
ClCG07G013280 Citrullus lanatus HOM05D006831 ORTHO05D008256 9.3e-20 102.1 120 44.2
CsaV3_3G023650 Cucumis sativus L. HOM05D006831 ORTHO05D008256 2.1e-19 100.9 123 45.5
Sed0018864 Sechium edule HOM05D006831 ORTHO05D008256 4.6e-19 99.8 120 47.5
Haze_02695 Corylus avellana HOM05D006831 ORTHO05D008256 2.3e-18 97.4 122 43.4
Nitab4.5_0012387g0010 Nicotiana tabacum HOM05D006831 ORTHO05D008256 3.9e-18 96.7 103 45.6
SalBow2G3477 Salvia bowleyana HOM05D006831 ORTHO05D008256 3.9e-18 96.7 119 38.7
TPR.G520 Trifolium pratense HOM05D041061 ORTHO05D020833 3.9e-18 96.7 58 86.2
MELO3C012995.2 Cucumis melo HOM05D006831 ORTHO05D008256 8.7e-18 95.5 124 45.2
Aa31LG4G70 Aethionema arabicum HOM05D006831 ORTHO05D008256 2.9e-13 80.5 117 40.2
THA.LOC104801499 Tarenaya hassleriana HOM05D006831 ORTHO05D008256 6.5e-13 79.3 54 61.1
Nitab4.5_0009505g0030 Nicotiana tabacum HOM05D006831 ORTHO05D008256 1.9e-12 77.8 57 52.6
Sp5g36010 Schrenkiella parvula HOM05D006831 ORTHO05D008256 7.9e-11 72.4 119 37.0
BcaC08g45266 Brassica carinata HOM05D006831 ORTHO05D008256 1.3e-10 71.6 95 41.1
C06p28690 Brassica napus HOM05D006831 ORTHO05D008256 1.3e-10 71.6 75 48.0
AL2G41800 Arabidopsis lyrata HOM05D006831 ORTHO05D008256 2.3e-10 70.9 97 41.2
A07p26290 Brassica napus HOM05D006831 ORTHO05D008256 3.9e-10 70.1 75 46.7
BolC6t38038H Brassica oleracea HOM05D006831 ORTHO05D008256 3.9e-10 70.1 75 46.7
BraA07t30273Z Brassica rapa HOM05D006831 ORTHO05D008256 3.9e-10 70.1 75 46.7
Os01g0744200 Oryza sativa ssp. japonica HOM05D006831 ORTHO05D008256 3.9e-10 70.1 120 33.3
Thhalv10018887m.g Eutrema salsugineum HOM05D006831 ORTHO05D008256 6.7e-10 69.3 83 43.4
AT1G79760 Arabidopsis thaliana HOM05D006831 ORTHO05D008256 1.9e-09 67.8 97 40.2
Zm00001eb153550 Zea mays HOM05D006831 ORTHO05D008256 2.5e-09 67.4 79 41.8
Carub.0002s2775 Capsella rubella HOM05D006831 ORTHO05D008256 4.3e-09 66.6 75 42.7
CARHR262750 Cardamine hirsuta HOM05D006831 ORTHO05D008256 1.6e-08 64.7 54 55.6


User provided reference genes

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