Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 1.1e-96 356.7 183 100.0
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 4.9e-81 304.7 183 86.3
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 9.2e-72 273.9 183 81.4
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 6.8e-59 231.1 187 72.2
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 5.4e-56 221.5 187 68.4
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 7.8e-55 217.6 178 70.2
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 5.6e-53 211.5 179 67.0
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 2.6e-50 202.6 125 81.6
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 2.6e-50 202.6 125 81.6
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 1.3e-49 200.3 178 64.0
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 2.4e-48 196.1 181 63.0
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 1.2e-42 177.2 180 57.2
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 2.9e-41 172.6 181 54.1
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 2.4e-40 169.5 179 53.6
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 2.7e-39 166.0 187 52.4
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 2.7e-39 166.0 183 51.9
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 4.6e-39 165.2 184 53.3
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 4.6e-39 165.2 178 57.3
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 3.9e-38 162.2 187 53.5
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 6.6e-38 161.4 184 54.9
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 1.5e-37 160.2 185 53.0
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 2.1e-36 156.4 187 52.9
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 2.8e-36 156.0 184 54.3
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 2.8e-36 156.0 181 53.6
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 8.1e-36 154.5 182 54.9
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 3.1e-35 152.5 184 52.2
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.1e-35 152.5 180 52.8
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.1e-35 152.5 182 54.9
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 4.0e-35 152.1 174 54.6
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 5.3e-35 151.8 188 49.5
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 5.3e-35 151.8 171 54.4
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 6.9e-35 151.4 175 53.1
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 9.0e-35 151.0 191 49.7
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 1.2e-34 150.6 180 51.1
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 3.4e-34 149.1 197 51.3
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 4.5e-34 148.7 181 53.6
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 1.7e-33 146.7 174 53.4
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 3.8e-33 145.6 188 48.9
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 2.4e-32 142.9 186 51.6
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 3.2e-32 142.5 179 50.3
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 4.2e-32 142.1 169 55.0
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 9.3e-32 141.0 180 50.0
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.2e-31 140.6 188 50.5
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 1.2e-31 140.6 167 47.3
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.6e-31 140.2 159 52.2
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.5e-31 139.0 156 53.8
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 7.9e-31 137.9 107 66.4
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 7.9e-31 137.9 184 48.4
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 7.9e-31 137.9 182 49.5
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 7.9e-31 137.9 139 57.6
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.0e-30 137.5 157 52.9
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.0e-30 137.5 187 48.7
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.0e-30 137.5 176 48.3
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.3e-30 137.1 97 68.0
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.8e-30 136.7 155 52.3
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 1.8e-30 136.7 114 67.5
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 2.3e-30 136.3 192 44.8
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 3.9e-30 135.6 176 48.3
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 5.1e-30 135.2 188 47.9
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 5.1e-30 135.2 94 69.1
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 8.7e-30 134.4 191 44.5
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 1.1e-29 134.0 107 66.4
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 1.9e-29 133.3 181 47.0
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 3.3e-29 132.5 193 48.7
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 4.3e-29 132.1 173 48.0
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 7.4e-29 131.3 171 48.5
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 7.4e-29 131.3 95 72.6
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.3e-28 130.6 214 43.0
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.3e-28 130.6 196 46.4
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.8e-28 129.4 206 44.7
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 2.8e-28 129.4 200 45.0
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 3.7e-28 129.0 107 65.4
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 3.7e-28 129.0 199 46.2
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 6.2e-28 128.3 101 69.3
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 8.1e-28 127.9 98 64.3
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-27 127.1 201 45.8
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 1.4e-27 127.1 98 64.3
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 3.1e-27 125.9 128 51.6
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 5.3e-27 125.2 196 46.4
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 5.3e-27 125.2 94 69.1
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 6.9e-27 124.8 201 44.8
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.9e-27 124.8 175 49.7
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 9.0e-27 124.4 91 63.7
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 1.2e-26 124.0 202 44.6
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.5e-26 123.6 202 43.1
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 2.0e-26 123.2 184 45.1
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 5.8e-26 121.7 195 44.1
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 1.3e-25 120.6 116 55.2
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 2.9e-25 119.4 172 47.1
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 4.9e-25 118.6 197 43.7
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 4.9e-25 118.6 75 76.0
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 4.9e-25 118.6 104 61.5
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 4.9e-25 118.6 109 57.8
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 6.4e-25 118.2 202 43.1
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 6.4e-25 118.2 197 43.7
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 1.1e-24 117.5 197 43.7
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 1.1e-24 117.5 99 63.6
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 1.4e-24 117.1 202 42.6
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.4e-24 117.1 202 42.6
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 2.4e-24 116.3 174 44.8
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 3.2e-24 115.9 202 43.1
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 4.2e-24 115.5 92 59.8
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 5.5e-24 115.2 94 59.6
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 7.1e-24 114.8 214 39.7
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 1.2e-23 114.0 201 42.3
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.2e-23 114.0 202 42.1
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 1.2e-23 114.0 103 64.1
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 3.5e-23 112.5 164 44.5
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 1.0e-22 110.9 88 61.4
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 2.3e-22 109.8 183 43.2
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 4.3e-21 105.5 85 65.9
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 3.7e-20 102.4 187 38.5
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 4.8e-20 102.1 187 38.5
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.1e-19 100.9 185 39.5
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 1.4e-19 100.5 100 54.0
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.8e-19 100.1 188 38.8
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.1e-19 99.4 181 38.7
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 6.9e-19 98.2 88 63.6
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.2e-18 97.4 84 57.1
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.0e-18 96.7 181 38.7
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 7.6e-18 94.7 106 50.0
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 1.9e-16 90.1 107 48.6
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 3.2e-16 89.4 63 63.5
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 9.3e-16 87.8 204 35.3
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 2.1e-15 86.7 80 53.8
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 2.1e-15 86.7 80 53.8
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 6.0e-15 85.1 175 36.0
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 1.3e-14 84.0 175 36.0
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 2.3e-14 83.2 177 36.2
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 2.3e-14 83.2 177 36.2
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 3.3e-13 79.3 183 34.4
CARHR123780 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.2e-07 60.8 166 38.0
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 2.7e-07 59.7 60 41.7


User provided reference genes

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