Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.4e-88 329.7 178 100.0
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 8.1e-81 303.9 176 90.9
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 1.1e-80 303.5 176 91.5
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 1.9e-77 292.7 178 86.5
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.1e-74 283.5 178 84.8
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 3.3e-74 282.0 178 83.7
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.1e-72 276.9 178 79.2
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 2.3e-72 275.8 178 82.6
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 5.2e-72 274.6 151 93.4
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.3e-67 259.2 167 79.0
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 3.0e-67 258.8 169 79.9
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 3.0e-67 258.8 178 78.1
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 3.0e-67 258.8 170 78.2
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 3.0e-67 258.8 178 73.6
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 5.1e-67 258.1 178 77.5
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 5.1e-67 258.1 178 78.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.1e-66 256.9 169 76.9
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.1e-66 256.9 178 76.4
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.5e-66 256.5 163 77.9
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.5e-66 256.5 163 77.9
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.5e-66 256.5 178 75.3
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.5e-66 256.5 167 76.0
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.9e-66 256.1 157 80.3
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.5e-66 255.8 171 76.6
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 2.5e-66 255.8 178 75.3
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.3e-66 255.4 165 78.2
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 5.6e-66 254.6 179 73.7
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 5.6e-66 254.6 179 73.7
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 7.3e-66 254.2 169 76.9
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 7.3e-66 254.2 166 75.3
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 7.3e-66 254.2 166 75.3
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 7.3e-66 254.2 162 78.4
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 7.3e-66 254.2 169 76.9
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 9.6e-66 253.8 177 75.7
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.2e-65 253.4 178 74.7
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 1.6e-65 253.1 178 75.3
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.6e-65 253.1 167 76.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.6e-65 253.1 178 75.3
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 2.1e-65 252.7 167 76.6
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.8e-65 252.3 169 75.1
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 3.6e-65 251.9 178 73.0
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.6e-65 251.9 177 74.6
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.6e-65 251.9 169 75.1
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.6e-65 251.9 169 75.1
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 4.7e-65 251.5 178 74.7
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 4.7e-65 251.5 173 75.7
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 4.7e-65 251.5 179 72.1
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 6.2e-65 251.1 176 73.9
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 6.2e-65 251.1 168 75.0
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 6.2e-65 251.1 165 77.0
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 6.2e-65 251.1 166 74.7
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 8.1e-65 250.8 178 74.2
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.1e-65 250.8 177 74.0
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 8.1e-65 250.8 167 77.2
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.1e-64 250.4 167 75.4
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.1e-64 250.4 169 74.6
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.1e-64 250.4 169 74.6
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.4e-64 250.0 168 75.0
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 1.4e-64 250.0 164 75.0
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.8e-64 249.6 168 75.0
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.8e-64 249.6 179 71.5
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 2.4e-64 249.2 166 76.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 2.4e-64 249.2 167 73.7
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 3.1e-64 248.8 164 76.8
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.1e-64 248.8 169 74.6
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 3.1e-64 248.8 176 75.6
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 4.0e-64 248.4 165 75.8
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 5.2e-64 248.1 166 75.3
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 5.2e-64 248.1 178 75.3
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.2e-63 246.9 167 74.3
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.2e-63 246.9 178 73.6
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.2e-63 246.9 172 74.4
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 1.5e-63 246.5 178 70.8
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 2.6e-63 245.7 172 73.3
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.4e-63 245.4 158 76.6
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 3.4e-63 245.4 176 73.9
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 1.3e-62 243.4 176 70.5
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 1.3e-62 243.4 176 70.5
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 1.3e-62 243.4 176 70.5
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 2.2e-62 242.7 180 70.6
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 2.9e-62 242.3 178 71.3
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 4.9e-62 241.5 180 68.9
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 6.4e-62 241.1 163 74.8
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 8.4e-62 240.7 178 70.2
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 1.4e-61 240.0 153 77.8
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 1.9e-61 239.6 163 74.8
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 3.2e-61 238.8 178 69.7
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 4.2e-61 238.4 153 78.4
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 7.1e-61 237.7 151 78.1
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 9.3e-61 237.3 153 76.5
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 2.1e-60 236.1 175 69.1
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 3.5e-60 235.3 178 66.9
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 3.5e-60 235.3 178 70.8
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.3e-59 233.4 177 70.6
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.7e-59 233.0 150 77.3
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 2.3e-59 232.6 153 76.5
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 2.5e-58 229.2 177 68.4
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 6.2e-57 224.6 168 68.5
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 6.2e-57 224.6 153 72.5
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 8.1e-57 224.2 154 73.4
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.1e-56 223.8 153 72.5
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.4e-56 223.4 153 71.2
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 3.1e-56 222.2 167 69.5
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 4.5e-55 218.4 142 76.1
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.8e-55 218.0 157 73.2
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.7e-54 216.5 155 71.6
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 2.9e-54 215.7 152 73.0
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.1e-52 209.5 137 75.2
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 2.5e-50 202.6 146 70.5
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 2.1e-49 199.5 131 75.6
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 6.2e-49 198.0 153 63.4
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.4e-48 196.8 119 83.2
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 5.3e-48 194.9 116 86.2
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.2e-47 193.7 164 61.0
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 1.7e-46 189.9 154 62.3
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 6.4e-46 188.0 120 80.0
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 3.5e-44 182.2 107 84.1
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.0e-43 180.6 107 83.2
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 3.9e-43 178.7 119 74.8
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 1.1e-42 177.2 106 83.0
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 1.9e-42 176.4 131 64.9
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 3.3e-42 175.6 152 57.9
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 2.9e-38 162.5 129 68.2
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 4.5e-31 138.7 91 74.7
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 8.8e-27 124.4 123 48.8
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.8e-14 82.4 106 48.1
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 1.1e-08 64.3 117 43.6


User provided reference genes

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